Experiment set14IT068 for Klebsiella michiganensis M5al

Compare to:

LB 0.5x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^5 spores/mL

200 most important genes:

  gene name fitness t score description  
BWI76_RS14065 -4.6 -2.1 hypothetical protein compare
BWI76_RS00875 -4.6 -3.1 DNA-binding transcriptional regulator FabR compare
BWI76_RS01095 -4.6 -2.1 UDP-N-acetyl-D-mannosamine dehydrogenase compare
BWI76_RS01115 -4.6 -2.1 dTDP-4-amino-4,6-dideoxygalactose transaminase compare
BWI76_RS26455 -4.4 -1.7 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase compare
BWI76_RS26460 -4.4 -3.0 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
BWI76_RS05810 -4.3 -1.2 hypothetical protein compare
BWI76_RS16360 -4.1 -1.1 electron transport complex subunit RsxB compare
BWI76_RS09335 -4.1 -1.1 baseplate assembly protein W compare
BWI76_RS08520 -4.0 -1.8 colicin transporter TolQ compare
BWI76_RS21345 -3.8 -1.7 sigma-E factor regulatory protein RseB compare
BWI76_RS17190 -3.7 -1.7 TonB system transport protein TonB compare
BWI76_RS08385 -3.7 -3.0 citrate (Si)-synthase compare
BWI76_RS14005 -3.7 -1.4 TetR family transcriptional regulator compare
BWI76_RS17975 -3.7 -3.0 tail-specific protease compare
BWI76_RS05120 -3.7 -8.1 bifunctional glycosyl transferase/transpeptidase compare
BWI76_RS21450 -3.6 -1.9 23S rRNA pseudouridine(1911/1915/1917) synthase compare
BWI76_RS11610 -3.6 -1.9 glutamate dehydrogenase compare
BWI76_RS11300 -3.5 -0.9 cupin compare
BWI76_RS25065 -3.5 -2.4 polyribonucleotide nucleotidyltransferase compare
BWI76_RS05570 -3.5 -0.9 hypothetical protein compare
BWI76_RS04160 -3.5 -2.4 phosphoserine phosphatase compare
BWI76_RS01135 -3.5 -4.4 lipopolysaccharide N-acetylmannosaminouronosyltransferase compare
BWI76_RS21070 -3.5 -1.6 outer membrane protein assembly factor BamB compare
BWI76_RS08530 -3.4 -1.3 protein TolA compare
BWI76_RS05015 -3.4 -1.8 transcriptional regulator compare
BWI76_RS25335 -3.3 -1.5 stringent starvation protein A compare
BWI76_RS21350 -3.2 -2.8 anti-RNA polymerase sigma factor SigE compare
BWI76_RS15290 -3.2 -1.2 transcriptional regulator compare
BWI76_RS25600 -3.2 -0.8 tRNA-Thr compare
BWI76_RS20360 -3.1 -0.8 cell division protein DedD compare
BWI76_RS13315 -3.1 -1.7 50S ribosomal protein L7/L12-serine acetyltransferase compare
BWI76_RS21570 -3.1 -1.6 RnfH family protein compare
BWI76_RS05075 -3.1 -0.8 type II secretion system protein GspG compare
BWI76_RS21310 -3.1 -1.2 DNA repair protein RecO compare
BWI76_RS13755 -3.1 -1.6 hypothetical protein compare
BWI76_RS27915 -3.1 -1.9 YceK/YidQ family lipoprotein compare
BWI76_RS14320 -3.0 -1.8 hypothetical protein compare
BWI76_RS08525 -3.0 -1.3 colicin transporter compare
BWI76_RS05260 -3.0 -1.1 chaperone compare
BWI76_RS04645 -3.0 -2.0 3-dehydroquinase compare
BWI76_RS19905 -2.9 -4.6 OmpK36 porin compare
BWI76_RS26730 -2.9 -4.9 inner membrane protein YhjD compare
BWI76_RS07465 -2.9 -1.1 TetR family transcriptional regulator compare
BWI76_RS24595 -2.9 -2.9 dihydroxyacetone kinase subunit DhaK compare
BWI76_RS00720 -2.8 -1.5 DNA-binding response regulator compare
BWI76_RS16200 -2.8 -1.5 NAD(P) transhydrogenase subunit beta compare
BWI76_RS19010 -2.8 -1.9 polysaccharide pyruvyl transferase yvff compare
BWI76_RS06680 -2.7 -1.0 hypothetical protein compare
BWI76_RS15825 -2.7 -1.0 hypothetical protein compare
BWI76_RS14390 -2.7 -1.0 hypothetical protein compare
BWI76_RS01090 -2.7 -3.4 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) compare
BWI76_RS01350 -2.7 -0.7 NAD(P)H-flavin reductase compare
BWI76_RS06535 -2.7 -1.8 endopeptidase La compare
BWI76_RS15000 -2.6 -2.5 amino acid ABC transporter ATP-binding protein compare
BWI76_RS24075 -2.6 -2.1 glutathione synthase compare
BWI76_RS09520 -2.6 -1.8 arginine ABC transporter ATP-binding protein ArtP compare
BWI76_RS15530 -2.6 -2.3 hypothetical protein compare
BWI76_RS08210 -2.6 -1.0 N-acetylglucosamine-6-phosphate deacetylase compare
BWI76_RS01800 -2.6 -1.8 glucose-6-phosphate isomerase compare
BWI76_RS08535 -2.6 -1.2 translocation protein TolB compare
BWI76_RS04525 -2.6 -1.4 4-hydroxythreonine-4-phosphate dehydrogenase PdxA compare
BWI76_RS01110 -2.6 -3.0 TDP-fucosamine acetyltransferase compare
BWI76_RS01080 -2.6 -6.6 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase compare
BWI76_RS09640 -2.6 -1.6 cysteine/glutathione ABC transporter permease/ATP-binding protein CydD compare
BWI76_RS25060 -2.5 -3.4 lipoprotein NlpI compare
BWI76_RS21580 -2.5 -1.1 SsrA-binding protein compare
BWI76_RS22690 -2.5 -2.5 adenylyl-sulfate kinase compare
BWI76_RS09645 -2.5 -0.6 thioredoxin-disulfide reductase compare
BWI76_RS22755 -2.5 -3.8 phosphoadenosine phosphosulfate reductase compare
BWI76_RS20380 -2.5 -0.6 tRNA pseudouridine(38-40) synthase TruA compare
BWI76_RS05915 -2.5 -2.8 helix-turn-helix transcriptional regulator compare
BWI76_RS13820 -2.4 -1.4 hypothetical protein compare
BWI76_RS19685 -2.4 -3.3 lysine transporter compare
BWI76_RS01385 -2.4 -2.1 potassium transporter compare
BWI76_RS23265 -2.4 -1.2 hypothetical protein compare
BWI76_RS11580 -2.3 -1.6 L-asparaginase 1 compare
BWI76_RS21370 -2.3 -0.8 ATP-dependent RNA helicase SrmB compare
BWI76_RS17980 -2.3 -3.2 RNA chaperone ProQ compare
BWI76_RS16355 -2.3 -2.0 electron transport complex subunit A compare
BWI76_RS07070 -2.3 -3.9 5-(carboxyamino)imidazole ribonucleotide mutase compare
BWI76_RS16485 -2.2 -1.2 ribonuclease T compare
BWI76_RS10930 -2.2 -6.5 glucan biosynthesis protein G compare
BWI76_RS12145 -2.2 -1.7 hypothetical protein compare
BWI76_RS18605 -2.2 -1.6 oxidoreductase molybdopterin-binding protein compare
BWI76_RS24740 -2.2 -2.4 GntR family transcriptional regulator compare
BWI76_RS25070 -2.2 -1.1 hypothetical protein compare
BWI76_RS11980 -2.2 -1.4 DeoR family transcriptional regulator compare
BWI76_RS00240 -2.2 -1.1 FMN-binding protein MioC compare
BWI76_RS24100 -2.2 -2.4 YggS family pyridoxal phosphate enzyme compare
BWI76_RS26665 -2.1 -2.6 DNA-binding response regulator compare
BWI76_RS01220 -2.1 -4.8 DNA-dependent helicase II compare
BWI76_RS12265 -2.0 -4.7 hypothetical protein compare
BWI76_RS24605 -2.0 -4.4 dihydroxyacetone kinase subunit DhaM compare
BWI76_RS08040 -2.0 -1.6 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH compare
BWI76_RS25425 -2.0 -0.7 arginine repressor compare
BWI76_RS00750 -2.0 -2.8 ATP-dependent protease ATP-binding subunit HslU compare
BWI76_RS08405 -2.0 -2.5 succinate dehydrogenase flavoprotein subunit compare
BWI76_RS19840 -1.9 -0.5 hypothetical protein compare
BWI76_RS26470 -1.9 -2.9 4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase compare
BWI76_RS27820 -1.9 -0.7 ilvB operon leader peptide IvbL compare
BWI76_RS19040 -1.9 -5.6 hypothetical protein compare
BWI76_RS14310 -1.9 -5.2 hypothetical protein compare
BWI76_RS24770 -1.9 -1.7 hypothetical protein compare
BWI76_RS09730 -1.9 -0.7 pyruvate formate lyase 1-activating protein compare
BWI76_RS09470 -1.9 -1.7 putrescine ABC transporter permease compare
BWI76_RS13560 -1.9 -0.7 amino acid ABC transporter substrate-binding subunit compare
BWI76_RS24580 -1.9 -2.4 PTS-dependent dihydroxyacetone kinase operon transcriptional regulator DhaR compare
BWI76_RS09190 -1.8 -1.2 hypothetical protein compare
BWI76_RS04705 -1.8 -2.2 DNA-binding transcriptional regulator FruR compare
BWI76_RS11155 -1.8 -2.0 penicillin-binding protein activator LpoB compare
BWI76_RS09670 -1.8 -1.9 recombination factor protein RarA compare
BWI76_RS14650 -1.8 -3.1 helix-turn-helix transcriptional regulator compare
BWI76_RS13330 -1.8 -1.1 tellurite resistance methyltransferase TehB compare
BWI76_RS23830 -1.8 -2.8 hypothetical protein compare
BWI76_RS02530 -1.8 -1.0 tRNA dimethylallyltransferase compare
BWI76_RS00140 -1.8 -1.0 phosphate transport system regulator PhoU compare
BWI76_RS03660 -1.8 -2.1 hypothetical protein compare
BWI76_RS18695 -1.8 -3.6 GntR family transcriptional regulator compare
BWI76_RS09760 -1.8 -1.8 3-phosphoshikimate 1-carboxyvinyltransferase compare
BWI76_RS01125 -1.8 -4.1 4-alpha-L-fucosyltransferase compare
BWI76_RS00180 -1.7 -0.6 F0F1 ATP synthase subunit epsilon compare
BWI76_RS19670 -1.7 -1.3 S-formylglutathione hydrolase compare
BWI76_RS20150 -1.7 -1.0 NADH:ubiquinone oxidoreductase subunit J compare
BWI76_RS15365 -1.7 -1.7 hypothetical protein compare
BWI76_RS09970 -1.7 -0.8 porin OmpA compare
BWI76_RS08275 -1.7 -1.5 LexA regulated protein compare
BWI76_RS14770 -1.7 -0.8 PTS IIA 2 domain protein compare
BWI76_RS14105 -1.7 -3.3 NADH:ubiquinone reductase (Na(+)-transporting) subunit E compare
BWI76_RS12070 -1.7 -0.7 hypothetical protein compare
BWI76_RS02610 -1.7 -3.2 transcriptional regulator compare
BWI76_RS00755 -1.6 -2.5 ATP-dependent protease subunit HslV compare
BWI76_RS12285 -1.6 -1.9 hypothetical protein compare
BWI76_RS26775 -1.6 -3.2 endo-1,4-D-glucanase compare
BWI76_RS16275 -1.6 -2.3 fumarate hydratase FumA compare
BWI76_RS17775 -1.6 -1.6 hypothetical protein compare
BWI76_RS11170 -1.6 -0.9 hypothetical protein compare
BWI76_RS20440 -1.6 -1.4 50S ribosomal protein L3 N(5)-glutamine methyltransferase compare
BWI76_RS22420 -1.6 -1.6 LacI family transcriptional regulator compare
BWI76_RS16920 -1.6 -0.9 3-(2,3-dihydroxyphenyl)propionate dioxygenase compare
BWI76_RS12400 -1.6 -4.4 TetR family transcriptional regulator compare
BWI76_RS15115 -1.6 -1.1 MFS transporter compare
BWI76_RS24400 -1.6 -1.5 outer membrane channel protein TolC compare
BWI76_RS15680 -1.5 -2.4 hypothetical protein compare
BWI76_RS24850 -1.5 -3.7 DeoR family transcriptional regulator compare
BWI76_RS08020 -1.5 -2.7 serine-type D-Ala-D-Ala carboxypeptidase compare
BWI76_RS16375 -1.5 -1.0 electron transport complex subunit G compare
BWI76_RS19900 -1.5 -2.2 FAD:protein FMN transferase compare
BWI76_RS00355 -1.5 -0.6 DNA polymerase I compare
BWI76_RS22130 -1.5 -2.7 fructose-1-phosphate/6-phosphogluconate phosphatase compare
BWI76_RS24900 -1.5 -0.8 DeoR family transcriptional regulator compare
BWI76_RS25920 -1.5 -0.9 peptidylprolyl isomerase compare
BWI76_RS09960 -1.5 -1.9 Lon protease compare
BWI76_RS06765 -1.5 -2.7 transcriptional regulator compare
BWI76_RS09735 -1.5 -2.9 formate acetyltransferase compare
BWI76_RS15605 -1.5 -1.7 hypothetical protein compare
BWI76_RS26080 -1.5 -3.3 cell division protein DamX compare
BWI76_RS20155 -1.5 -0.9 NADH-quinone oxidoreductase subunit I compare
BWI76_RS09110 -1.5 -2.1 glutathione ABC transporter permease GsiD compare
BWI76_RS15110 -1.4 -3.6 putative excinuclease ABC subunit A compare
BWI76_RS21250 -1.4 -2.6 two-component system response regulator GlrR compare
BWI76_RS20385 -1.4 -1.7 aspartate-semialdehyde dehydrogenase compare
BWI76_RS11030 -1.4 -1.5 MFS transporter compare
BWI76_RS03665 -1.4 -1.5 ABC transporter ATP-binding protein compare
BWI76_RS04305 -1.4 -0.7 molecular chaperone DnaJ compare
BWI76_RS09910 -1.4 -7.9 dihydroorotate dehydrogenase (quinone) compare
BWI76_RS13595 -1.4 -2.4 transcriptional regulator compare
BWI76_RS11275 -1.4 -3.2 sensor protein PhoQ compare
BWI76_RS05835 -1.4 -1.0 gamma-glutamyl-phosphate reductase compare
BWI76_RS14755 -1.4 -2.0 SIS domain-containing protein compare
BWI76_RS26670 -1.4 -4.3 two-component sensor histidine kinase compare
BWI76_RS25700 -1.4 -2.4 heavy metal-responsive transcriptional regulator compare
BWI76_RS26440 -1.4 -0.8 hypothetical protein compare
BWI76_RS23490 -1.4 -2.6 fimbrial protein compare
BWI76_RS26390 -1.3 -5.1 cell division protein FtsX compare
BWI76_RS10935 -1.3 -2.7 glucan biosynthesis glucosyltransferase H compare
BWI76_RS07185 -1.3 -0.8 hypothetical protein compare
BWI76_RS17720 -1.3 -0.3 muramoyltetrapeptide carboxypeptidase compare
BWI76_RS11410 -1.3 -1.5 leucine efflux protein compare
BWI76_RS19870 -1.3 -2.0 malate:quinone oxidoreductase compare
BWI76_RS25300 -1.3 -1.4 hybrid sensor histidine kinase/response regulator compare
BWI76_RS18025 -1.3 -3.3 spore coat U domain-containing protein compare
BWI76_RS15660 -1.3 -1.3 hypothetical protein compare
BWI76_RS11700 -1.3 -1.0 hypothetical protein compare
BWI76_RS17955 -1.3 -1.6 hypothetical protein compare
BWI76_RS21100 -1.3 -1.0 nucleoside-diphosphate kinase compare
BWI76_RS26395 -1.3 -2.9 cell division protein FtsE compare
BWI76_RS15450 -1.3 -1.7 hypothetical protein compare
BWI76_RS05450 -1.3 -0.4 ribonuclease HI compare
BWI76_RS08750 -1.3 -1.0 kinase inhibitor compare
BWI76_RS08395 -1.3 -1.1 succinate dehydrogenase cytochrome b556 large subunit compare
BWI76_RS24600 -1.3 -1.1 dihydroxyacetone kinase compare
BWI76_RS12125 -1.3 -2.0 hypothetical protein compare
BWI76_RS22120 -1.3 -1.8 glutamate--cysteine ligase compare
BWI76_RS04270 -1.3 -2.3 transaldolase compare
BWI76_RS19615 -1.3 -2.4 vancomycin high temperature exclusion protein compare
BWI76_RS19330 -1.3 -0.5 HAD family hydrolase compare
BWI76_RS00600 -1.3 -1.9 LacI family transcriptional regulator compare
BWI76_RS11110 -1.3 -1.4 cell division protein YceG compare
BWI76_RS00715 -1.3 -0.8 two-component sensor histidine kinase compare


Specific Phenotypes

For 1 genes in this experiment

For mixed community Mixed culture; Trichoderma virens G41 spores at 2.5*10^5 spores/mL in Klebsiella michiganensis M5al

For mixed community Mixed culture; Trichoderma virens G41 spores at 2.5*10^5 spores/mL across organisms