Experiment set14IT066 for Klebsiella michiganensis M5al

Compare to:

LB 1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^4 spores/mL

200 most important genes:

  gene name fitness t score description  
BWI76_RS26460 -4.7 -3.2 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
BWI76_RS26455 -4.6 -2.1 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase compare
BWI76_RS05260 -4.6 -1.5 chaperone compare
BWI76_RS23265 -4.2 -1.9 hypothetical protein compare
BWI76_RS08520 -4.1 -2.2 colicin transporter TolQ compare
BWI76_RS21070 -3.7 -2.0 outer membrane protein assembly factor BamB compare
BWI76_RS05015 -3.7 -2.3 transcriptional regulator compare
BWI76_RS25870 -3.5 -1.6 elongation factor Tu compare
BWI76_RS08530 -3.4 -1.6 protein TolA compare
BWI76_RS21310 -3.4 -1.5 DNA repair protein RecO compare
BWI76_RS01110 -3.3 -6.8 TDP-fucosamine acetyltransferase compare
BWI76_RS21350 -3.2 -2.7 anti-RNA polymerase sigma factor SigE compare
BWI76_RS11440 -3.2 -1.4 hypothetical protein compare
BWI76_RS01350 -2.9 -0.9 NAD(P)H-flavin reductase compare
BWI76_RS01800 -2.9 -2.0 glucose-6-phosphate isomerase compare
BWI76_RS14300 -2.9 -2.8 hypothetical protein compare
BWI76_RS21580 -2.8 -1.5 SsrA-binding protein compare
BWI76_RS11255 -2.7 -2.0 putrescine/spermidine ABC transporter ATP-binding protein compare
BWI76_RS01115 -2.7 -2.5 dTDP-4-amino-4,6-dideoxygalactose transaminase compare
BWI76_RS08535 -2.7 -1.4 translocation protein TolB compare
BWI76_RS06535 -2.6 -2.5 endopeptidase La compare
BWI76_RS15825 -2.6 -1.1 hypothetical protein compare
BWI76_RS09645 -2.6 -0.8 thioredoxin-disulfide reductase compare
BWI76_RS24600 -2.6 -2.3 dihydroxyacetone kinase compare
BWI76_RS04160 -2.6 -2.7 phosphoserine phosphatase compare
BWI76_RS14390 -2.5 -1.1 hypothetical protein compare
BWI76_RS24740 -2.5 -3.2 GntR family transcriptional regulator compare
BWI76_RS25335 -2.5 -1.9 stringent starvation protein A compare
BWI76_RS21370 -2.5 -1.1 ATP-dependent RNA helicase SrmB compare
BWI76_RS00240 -2.4 -1.5 FMN-binding protein MioC compare
BWI76_RS24605 -2.4 -5.0 dihydroxyacetone kinase subunit DhaM compare
BWI76_RS01095 -2.4 -2.4 UDP-N-acetyl-D-mannosamine dehydrogenase compare
BWI76_RS21235 -2.3 -1.0 hypothetical protein compare
BWI76_RS08525 -2.3 -2.1 colicin transporter compare
BWI76_RS22755 -2.2 -3.9 phosphoadenosine phosphosulfate reductase compare
BWI76_RS05810 -2.2 -1.3 hypothetical protein compare
BWI76_RS01090 -2.1 -3.6 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) compare
BWI76_RS14320 -2.1 -1.9 hypothetical protein compare
BWI76_RS19770 -2.1 -1.5 bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase compare
BWI76_RS25600 -2.1 -0.9 tRNA-Thr compare
BWI76_RS01080 -2.1 -6.8 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase compare
BWI76_RS02530 -2.1 -1.4 tRNA dimethylallyltransferase compare
BWI76_RS26440 -2.0 -1.3 hypothetical protein compare
BWI76_RS19905 -2.0 -3.7 OmpK36 porin compare
BWI76_RS01220 -2.0 -4.7 DNA-dependent helicase II compare
BWI76_RS08210 -2.0 -1.2 N-acetylglucosamine-6-phosphate deacetylase compare
BWI76_RS21345 -2.0 -2.2 sigma-E factor regulatory protein RseB compare
BWI76_RS25300 -2.0 -2.9 hybrid sensor histidine kinase/response regulator compare
BWI76_RS21340 -2.0 -1.7 SoxR reducing system protein RseC compare
BWI76_RS17975 -2.0 -4.6 tail-specific protease compare
BWI76_RS05120 -2.0 -7.2 bifunctional glycosyl transferase/transpeptidase compare
BWI76_RS18070 -2.0 -3.7 DNA polymerase III subunit epsilon compare
BWI76_RS09730 -1.9 -0.8 pyruvate formate lyase 1-activating protein compare
BWI76_RS04100 -1.9 -3.2 peptide chain release factor 3 compare
BWI76_RS00180 -1.9 -0.8 F0F1 ATP synthase subunit epsilon compare
BWI76_RS09760 -1.9 -2.1 3-phosphoshikimate 1-carboxyvinyltransferase compare
BWI76_RS02775 -1.9 -3.6 outer membrane protein assembly factor compare
BWI76_RS01135 -1.9 -4.5 lipopolysaccharide N-acetylmannosaminouronosyltransferase compare
BWI76_RS01125 -1.9 -2.9 4-alpha-L-fucosyltransferase compare
BWI76_RS21450 -1.8 -2.3 23S rRNA pseudouridine(1911/1915/1917) synthase compare
BWI76_RS09190 -1.8 -1.6 hypothetical protein compare
BWI76_RS09970 -1.8 -1.0 porin OmpA compare
BWI76_RS11155 -1.7 -2.4 penicillin-binding protein activator LpoB compare
BWI76_RS23490 -1.7 -4.7 fimbrial protein compare
BWI76_RS10060 -1.7 -1.6 acylphosphatase compare
BWI76_RS21565 -1.7 -0.9 outer membrane protein assembly factor BamE compare
BWI76_RS23365 -1.7 -3.4 LysR family transcriptional regulator compare
BWI76_RS02815 -1.7 -1.4 fructose-bisphosphatase class I compare
BWI76_RS26095 -1.7 -0.7 shikimate kinase compare
BWI76_RS10950 -1.6 -2.0 MFS transporter compare
BWI76_RS26665 -1.6 -2.7 DNA-binding response regulator compare
BWI76_RS16360 -1.6 -1.0 electron transport complex subunit RsxB compare
BWI76_RS17980 -1.6 -2.6 RNA chaperone ProQ compare
BWI76_RS26670 -1.6 -6.1 two-component sensor histidine kinase compare
BWI76_RS14005 -1.6 -1.3 TetR family transcriptional regulator compare
BWI76_RS12450 -1.6 -2.5 phage shock protein PspA compare
BWI76_RS13595 -1.6 -3.1 transcriptional regulator compare
BWI76_RS04645 -1.6 -2.4 3-dehydroquinase compare
BWI76_RS09825 -1.6 -4.5 envelope biogenesis factor ElyC compare
BWI76_RS08040 -1.6 -1.7 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH compare
BWI76_RS19010 -1.5 -2.0 polysaccharide pyruvyl transferase yvff compare
BWI76_RS22950 -1.5 -2.0 membrane protein compare
BWI76_RS08380 -1.5 -1.1 endonuclease VIII compare
BWI76_RS19215 -1.5 -1.3 proline-specific peptidase compare
BWI76_RS02725 -1.5 -0.9 HxlR family transcriptional regulator compare
BWI76_RS20135 -1.5 -3.6 NADH-quinone oxidoreductase subunit M compare
BWI76_RS12090 -1.5 -1.9 HNH endonuclease compare
BWI76_RS00875 -1.5 -3.8 DNA-binding transcriptional regulator FabR compare
BWI76_RS18815 -1.5 -1.8 nitrogenase molybdenum-iron protein alpha chain compare
BWI76_RS25920 -1.5 -1.2 peptidylprolyl isomerase compare
BWI76_RS02865 -1.5 -4.3 hypothetical protein compare
BWI76_RS07465 -1.5 -0.9 TetR family transcriptional regulator compare
BWI76_RS20280 -1.5 -3.1 phosphodiesterase compare
BWI76_RS17525 -1.5 -1.8 XshC-Cox1-family protein compare
BWI76_RS00715 -1.5 -1.0 two-component sensor histidine kinase compare
BWI76_RS27225 -1.5 -3.8 rhodanese-like domain-containing protein compare
BWI76_RS21250 -1.5 -2.6 two-component system response regulator GlrR compare
BWI76_RS22690 -1.5 -1.7 adenylyl-sulfate kinase compare
BWI76_RS05450 -1.4 -0.6 ribonuclease HI compare
BWI76_RS00080 -1.4 -2.6 N-acetylmannosamine kinase compare
BWI76_RS04305 -1.4 -1.0 molecular chaperone DnaJ compare
BWI76_RS14065 -1.4 -1.3 hypothetical protein compare
BWI76_RS27440 -1.4 -1.3 DNA helicase RecG compare
BWI76_RS01185 -1.4 -0.9 adenylate cyclase compare
BWI76_RS11610 -1.4 -1.8 glutamate dehydrogenase compare
BWI76_RS12285 -1.4 -2.4 hypothetical protein compare
BWI76_RS10930 -1.4 -5.0 glucan biosynthesis protein G compare
BWI76_RS10990 -1.4 -2.4 dihydroorotase compare
BWI76_RS21075 -1.4 -0.9 membrane protein compare
BWI76_RS13755 -1.4 -1.4 hypothetical protein compare
BWI76_RS06395 -1.4 -3.1 tRNA 4-thiouridine(8) synthase ThiI compare
BWI76_RS09755 -1.3 -2.1 phosphoserine transaminase compare
BWI76_RS10935 -1.3 -3.2 glucan biosynthesis glucosyltransferase H compare
BWI76_RS20360 -1.3 -0.7 cell division protein DedD compare
BWI76_RS16190 -1.3 -3.1 universal stress protein UspE compare
BWI76_RS20440 -1.3 -2.4 50S ribosomal protein L3 N(5)-glutamine methyltransferase compare
BWI76_RS10305 -1.3 -4.4 transposase compare
BWI76_RS15110 -1.3 -3.2 putative excinuclease ABC subunit A compare
BWI76_RS09615 -1.3 -1.3 ATP-dependent Clp protease ATP-binding subunit ClpA compare
BWI76_RS16965 -1.3 -2.1 murein lipoprotein compare
BWI76_RS02780 -1.3 -8.5 translocation and assembly module TamB compare
BWI76_RS24770 -1.3 -2.1 hypothetical protein compare
BWI76_RS08020 -1.3 -3.8 serine-type D-Ala-D-Ala carboxypeptidase compare
BWI76_RS03295 -1.3 -1.2 transposase compare
BWI76_RS17720 -1.3 -0.4 muramoyltetrapeptide carboxypeptidase compare
BWI76_RS23360 -1.3 -1.3 diaminopimelate decarboxylase compare
BWI76_RS10745 -1.3 -0.7 hypothetical protein compare
BWI76_RS26390 -1.3 -4.7 cell division protein FtsX compare
BWI76_RS01385 -1.3 -2.1 potassium transporter compare
BWI76_RS26080 -1.3 -2.7 cell division protein DamX compare
BWI76_RS08500 -1.3 -1.8 cytochrome d ubiquinol oxidase subunit 2 compare
BWI76_RS26730 -1.3 -4.7 inner membrane protein YhjD compare
BWI76_RS16230 -1.3 -1.7 dihydromonapterin reductase compare
BWI76_RS08495 -1.3 -3.0 cytochrome bd-I ubiquinol oxidase subunit I compare
BWI76_RS00600 -1.3 -3.1 LacI family transcriptional regulator compare
BWI76_RS01630 -1.2 -0.9 16S ribosomal RNA compare
BWI76_RS26775 -1.2 -2.7 endo-1,4-D-glucanase compare
BWI76_RS27390 -1.2 -3.4 ribonuclease PH compare
BWI76_RS01200 -1.2 -0.8 diaminopimelate epimerase compare
BWI76_RS17045 -1.2 -1.2 hypothetical protein compare
BWI76_RS06680 -1.2 -0.9 hypothetical protein compare
BWI76_RS15115 -1.2 -1.2 MFS transporter compare
BWI76_RS21290 -1.2 -2.4 DNA-binding transcriptional regulator compare
BWI76_RS15705 -1.2 -2.3 putative holin protein compare
BWI76_RS04270 -1.2 -3.0 transaldolase compare
BWI76_RS17860 -1.2 -1.3 YoaH family protein compare
BWI76_RS24945 -1.2 -1.4 glutamine amidotransferase compare
BWI76_RS24765 -1.2 -3.1 membrane protein compare
BWI76_RS11275 -1.2 -3.9 sensor protein PhoQ compare
BWI76_RS22805 -1.2 -5.9 GTP diphosphokinase compare
BWI76_RS21810 -1.2 -1.1 universal stress protein compare
BWI76_RS20145 -1.2 -1.1 NADH-quinone oxidoreductase subunit K compare
BWI76_RS13435 -1.2 -0.8 hypothetical protein compare
BWI76_RS12230 -1.1 -4.3 hypothetical protein compare
BWI76_RS22940 -1.1 -2.4 DNA-binding transcriptional activator FucR compare
BWI76_RS07070 -1.1 -3.9 5-(carboxyamino)imidazole ribonucleotide mutase compare
BWI76_RS02610 -1.1 -3.7 transcriptional regulator compare
BWI76_RS22765 -1.1 -5.2 sulfite reductase subunit alpha compare
BWI76_RS19035 -1.1 -4.8 dTDP-rhamnosyl transferase compare
BWI76_RS23495 -1.1 -4.2 hypothetical protein compare
BWI76_RS23515 -1.1 -2.1 antibiotic biosynthesis monooxygenase compare
BWI76_RS11190 -1.1 -1.1 putative TetR/AcrR family transcriptional regulatory protein compare
BWI76_RS16950 -1.1 -1.3 TetR family transcriptional regulator compare
BWI76_RS06030 -1.1 -3.7 homocysteine S-methyltransferase compare
BWI76_RS15350 -1.1 -0.7 hypothetical protein compare
BWI76_RS15365 -1.1 -2.8 hypothetical protein compare
BWI76_RS21465 -1.1 -2.6 bifunctional chorismate mutase/prephenate dehydratase compare
BWI76_RS11015 -1.1 -1.6 hypothetical protein compare
BWI76_RS18410 -1.1 -2.6 drug/metabolite exporter YedA compare
BWI76_RS12200 -1.1 -2.5 hypothetical protein compare
BWI76_RS10035 -1.1 -1.2 hypothetical protein compare
BWI76_RS09195 -1.1 -0.7 N-acetyltransferase compare
BWI76_RS12170 -1.1 -1.4 hypothetical protein compare
BWI76_RS04815 -1.1 -1.7 cell division protein ZapD compare
BWI76_RS01170 -1.1 -1.8 uroporphyrinogen-III C-methyltransferase compare
BWI76_RS22645 -1.1 -4.6 RNA polymerase sigma factor RpoS compare
BWI76_RS03300 -1.1 -3.2 hypothetical protein compare
BWI76_RS13820 -1.1 -1.0 hypothetical protein compare
BWI76_RS24900 -1.1 -0.9 DeoR family transcriptional regulator compare
BWI76_RS00065 -1.0 -2.8 MurR/RpiR family transcriptional regulator compare
BWI76_RS06520 -1.0 -1.7 trigger factor compare
BWI76_RS12270 -1.0 -1.3 hypothetical protein compare
BWI76_RS19705 -1.0 -3.2 kinase compare
BWI76_RS08405 -1.0 -1.9 succinate dehydrogenase flavoprotein subunit compare
BWI76_RS20720 -1.0 -1.0 hypothetical protein compare
BWI76_RS01100 -1.0 -2.8 dTDP-glucose 4,6-dehydratase compare
BWI76_RS13590 -1.0 -1.5 hypothetical protein compare
BWI76_RS26150 -1.0 -1.7 molecular chaperone Hsp33 compare
BWI76_RS16425 -1.0 -1.8 hypothetical protein compare
BWI76_RS04525 -1.0 -1.1 4-hydroxythreonine-4-phosphate dehydrogenase PdxA compare
BWI76_RS08720 -1.0 -1.1 imidazolonepropionase compare
BWI76_RS23920 -1.0 -1.5 D-3-phosphoglycerate dehydrogenase compare
BWI76_RS02580 -1.0 -1.4 23S rRNA (guanosine(2251)-2'-O)-methyltransferase compare
BWI76_RS16075 -1.0 -1.1 oxidoreductase compare
BWI76_RS21795 -1.0 -1.7 EAL domain-containing protein compare
BWI76_RS24580 -1.0 -2.8 PTS-dependent dihydroxyacetone kinase operon transcriptional regulator DhaR compare
BWI76_RS12515 -1.0 -1.6 protease compare
BWI76_RS13915 -1.0 -3.4 magnesium transport protein MgtC compare
BWI76_RS18470 -1.0 -2.1 hypothetical protein compare
BWI76_RS27075 -1.0 -4.5 IclR family transcriptional regulator compare


Specific Phenotypes

For 1 genes in this experiment

For mixed community Mixed culture; Trichoderma virens G41 spores at 2.5*10^4 spores/mL in Klebsiella michiganensis M5al

For mixed community Mixed culture; Trichoderma virens G41 spores at 2.5*10^4 spores/mL across organisms