Experiment set14IT058 for Desulfovibrio vulgaris Hildenborough JW710

Compare to:

MoLS4 with Succinate 10mM

200 most detrimental genes:

  gene name fitness t score description  
DVU2867 +1.7 3.0 holin (TIGR) compare
DVU1363 rfbD +1.4 7.9 dTDP-4-dehydrorhamnose reductase (TIGR) compare
DVU1520 +1.3 1.1 hypothetical protein (TIGR) compare
DVU1679 idi +1.3 3.1 isopentenyl-diphosphate delta-isomerase (TIGR) compare
DVU1726 +1.3 2.3 hypothetical protein (TIGR) compare
DVU0973 +1.3 0.8 4-hydroxybenzoate octaprenyltransferase, putative (TIGR) compare
DVU1933 +1.3 1.0 peptidase, PfpI family (TIGR) compare
DVU1251 +1.3 3.9 hypothetical protein (TIGR) compare
DVU0043 fliQ +1.3 8.7 flagellar biosynthetic protein FliQ (TIGR) compare
DVU0318 +1.3 6.0 TPR domain protein (TIGR) compare
DVU2048 +1.3 0.7 hypothetical protein (TIGR) compare
DVU0311 +1.2 7.3 flagellar assembly protein FliH, putative (TIGR) compare
DORF13021 +1.2 2.6 no description compare
DVU2669 +1.2 3.9 conserved domain protein (TIGR) compare
DVU1862 +1.2 7.1 GGDEF domain protein (TIGR) compare
DVU3234 +1.2 7.4 flagellar biosynthetic protein FliR (TIGR) compare
DVU0698 rfbC +1.2 7.1 dTDP-4-dehydrorhamnose 3,5-epimerase (TIGR) compare
DVU0044 fliP +1.2 8.5 flagellar biosynthetic protein fliP (TIGR) compare
DVU0045 +1.2 7.3 flagellar biosynthesis protein, FliO, putative (TIGR) compare
DVU1210 +1.1 0.7 conserved hypothetical protein (TIGR) compare
DVU0046 fliN +1.1 5.2 flagellar motor switch protein FliN (TIGR) compare
DVU0512 flgF +1.1 8.1 flagellar basal-body rod protein, putative (TIGR) compare
DVU0509 +1.1 1.1 conserved hypothetical protein (TIGR) compare
DORF8192 +1.1 4.6 SEED: FIG00606834: hypothetical protein compare
DVU2894 flrA +1.1 5.2 sigma-54 dependent transcriptional regulator (TIGR) compare
DVU3233 flhB +1.1 7.7 flagellar biosynthetic protein FlhB (TIGR) compare
DVU0310 fliI +1.0 7.5 flagellum-specific ATP synthase FliI (TIGR) compare
DVU1465 +1.0 7.4 CgeB family protein (TIGR) compare
DVU0515 flgH +1.0 7.3 flagellar L-ring protein FlgH (TIGR) compare
DVU0074 +1.0 3.0 polysaccharide biosynthesis domain protein (TIGR) compare
DVU0316 flgB +1.0 2.7 flagellar basal-body rod protein FlgB (TIGR) compare
DVU0519 +1.0 8.3 flagellar hook-associated protein FlgK, putative (TIGR) compare
DVU3232 flhA +1.0 7.7 flagellar biosynthetic protein FlhA (TIGR) compare
DVU0516 flgI +1.0 6.2 flagellar P-ring protein FlgI (TIGR) compare
DVU0314 fliE +1.0 6.5 flagellar basal body component FliE (TIGR) compare
DVU0910 fliM +1.0 4.9 flagellar motor switch protein FliM (TIGR) compare
DVU0313 fliF +1.0 6.7 flagellar M-ring protein FliF (TIGR) compare
DVU0863 +1.0 6.9 flagellar hook-associated protein 2, putative (TIGR) compare
DVU0514 +1.0 4.9 FlgA family protein (TIGR) compare
DVU0410 +1.0 7.0 hypothetical protein (TIGR) compare
DVU2896 +0.9 7.6 TPR domain protein (TIGR) compare
DVU0522 yviF +0.9 4.1 conserved hypothetical protein (TIGR) compare
DVU0307 +0.9 6.2 flagella basal body rod domain protein (TIGR) compare
DVU3329 +0.9 2.4 hypothetical protein (TIGR) compare
DVU0312 fliG +0.9 5.7 flagellar motor switch protein FliG (TIGR) compare
DORF12455 +0.9 1.1 SEED: helix-turn-helix protein, CopG family compare
DORF10446 +0.9 5.0 SEED: FIG00604570: hypothetical protein compare
DVU2915 +0.9 3.2 hypothetical protein (TIGR) compare
DVU0518 +0.9 5.6 hypothetical protein (TIGR) compare
DVU3177 +0.9 5.2 hypothetical protein (TIGR) compare
DVU3229 fliA +0.9 3.7 RNA polymerase sigma factor for flagellar operon FliA (TIGR) compare
DVU1838 trxB-2 +0.9 2.6 thioredoxin reductase (TIGR) compare
DVU0295 +0.9 6.1 amine oxidase, flavin-containing (TIGR) compare
DVU1443 flgE +0.9 4.9 flagellar hook protein FlgE (TIGR) compare
DVU3387 +0.8 5.5 hypothetical protein (TIGR) compare
DVU0913 +0.8 3.3 conserved hypothetical protein (TIGR) compare
DVU1863 +0.8 3.9 flagellar synthesis regulator FleN, putative (TIGR) compare
DVU0513 flgG +0.8 4.2 flagellar basal-body rod protein FlgG (TIGR) compare
DVU0858 +0.8 4.5 lipoprotein, putative (TIGR) compare
DVU0315 flgC +0.8 4.3 flagellar basal-body rod protein FlgC (TIGR) compare
DVU2203 +0.8 1.4 endoribonuclease, L-PSP family (TIGR) compare
DVU1464 +0.8 5.8 heptosyltransferase family protein (TIGR) compare
DVU0409 +0.8 1.9 hypothetical protein (TIGR) compare
DVU2649 +0.8 3.6 hypothetical protein (TIGR) compare
DVU1875 +0.8 1.2 dafA protein (TIGR) compare
DVU0001 dnaA-1 +0.8 2.8 chromosomal replication initiator protein DnaA (TIGR) compare
DVU2957 +0.8 0.5 hypothetical protein (TIGR) compare
DVU0034 +0.8 5.7 DSBA-like thioredoxin domain protein (TIGR) compare
DVU3287 +0.7 5.6 glycosyl transferase, group 2 family protein (TIGR) compare
DVU1444 flgD +0.7 3.9 basal-body rod modification protein FlgD (TIGR) compare
DVU1268 +0.7 3.4 hypothetical protein (TIGR) compare
DVU0726 tgt +0.7 5.3 queuine tRNA-ribosyltransferase (TIGR) compare
DVU1351 +0.7 1.1 membrane protein, MarC family (TIGR) compare
DORF35977 +0.7 5.0 no description compare
DVU0376 +0.7 1.0 hypothetical protein (TIGR) compare
DVU1045 +0.7 3.4 hypothetical protein (TIGR) compare
DVU0989 +0.7 2.9 periplasmic divalent cation tolerance protein cutA, putative (TIGR) compare
DVU2512 mraW +0.7 0.8 S-adenosyl-methyltransferase MraW (TIGR) compare
DVU0047 +0.6 3.3 flagellar protein FliL (TIGR) compare
DVU0862 +0.6 2.0 flagellar protein FliS/hypothetical protein, fusion (TIGR) compare
DVU1446 +0.6 3.3 heptosyltransferase family protein (TIGR) compare
DVU0859 +0.6 4.0 hypothetical protein (TIGR) compare
DVU2028 +0.6 4.5 conserved domain protein (TIGR) compare
DVU0520 +0.6 4.6 flagellar hook-associated protein FlgL, putative (TIGR) compare
DVU1009 +0.6 1.5 hypothetical protein (TIGR) compare
DVU2847 +0.6 2.4 hypothetical protein (TIGR) compare
DVU2026 +0.6 1.8 conserved hypothetical protein (TIGR) compare
DVU2578 +0.6 3.3 response regulator (TIGR) compare
DVU3024 +0.6 0.6 hypothetical protein (TIGR) compare
DVU1148 +0.6 2.1 conserved hypothetical protein (TIGR) compare
DVU2112 +0.6 1.7 hypothetical protein (TIGR) compare
DVU3227 +0.6 2.3 flagellar basal body-associated protein, putative (TIGR) compare
DVU1682 +0.6 1.9 GAF domain protein (TIGR) compare
DVU0300 +0.6 0.3 radical SAM domain protein (TIGR) compare
DVU0257 +0.6 0.9 acetyltransferase, GNAT family (TIGR) compare
DVU3117 +0.6 1.7 hypothetical protein (TIGR) compare
DVU2022 +0.6 4.2 conserved hypothetical protein (TIGR) compare
DORF768 +0.6 1.3 no description compare
DVU2855 +0.6 1.3 tail/DNA circulation protein, putative (TIGR) compare
DVU1445 +0.6 2.7 flagellar hook-length control domain protein (TIGR) compare
DVU0912 +0.6 2.4 conserved domain protein (TIGR) compare
DVU1550 +0.6 3.1 phosphoglycerate mutase family protein (TIGR) compare
DVU3067 hypF +0.6 1.1 [NiFe] hydrogenase maturation protein HypF (TIGR) compare
DVU1369 +0.5 2.1 hypothetical protein (TIGR) compare
DVUA0079 cysC +0.5 1.9 adenylylsulfate kinase (TIGR) compare
DVU1374 +0.5 1.8 conserved hypothetical protein (TIGR) compare
DVU0842 +0.5 1.6 hypothetical protein (TIGR) compare
DVU0298 +0.5 2.1 hypothetical protein (TIGR) compare
DORF26459 +0.5 2.0 no description compare
DVU1347 +0.5 2.4 peptidase, M23/M37 family (TIGR) compare
DORF17147 +0.5 2.4 SEED: TPR domain protein compare
DVU1522 +0.5 2.4 hypothetical protein (TIGR) compare
DVU0411 +0.5 3.3 heptosyltransferase family protein (TIGR) compare
DVU0301 +0.5 0.5 hypothetical protein (TIGR) compare
DVU2871 +0.5 1.9 minor capsid protein C (TIGR) compare
DVU0451 +0.5 3.7 chloride channel family protein (TIGR) compare
DVU1744 +0.5 1.9 DNA-binding protein (TIGR) compare
DVU3092 +0.5 2.1 hypothetical protein (TIGR) compare
DVU0227 +0.5 1.4 conserved hypothetical protein (TIGR) compare
DVU3260 +0.5 1.7 hypothetical protein (TIGR) compare
DVU2331 +0.5 2.2 Smr family protein (TIGR) compare
DVU1274 +0.5 1.8 hypothetical protein (TIGR) compare
DVU1526 +0.5 1.9 hypothetical protein (TIGR) compare
DVU0705 dctM +0.5 2.1 TRAP dicarboxylate transporter, putative (TIGR) compare
DVU1646 arsC +0.5 1.8 arsenate reductase (TIGR) compare
DVU1265 +0.5 2.2 hypothetical protein (TIGR) compare
DVU0413 trk1 +0.5 2.5 potassium uptake protein, TrkH family (TIGR) compare
DVU1141 +0.5 1.4 hypothetical protein (TIGR) compare
DVU3360 parB +0.5 3.2 ParB family protein (TIGR) compare
DVU2023 +0.5 3.1 hypothetical protein (TIGR) compare
DVU1442 +0.5 1.2 flagellin FlaG, putative (TIGR) compare
DVUA0084 +0.5 0.6 transcriptional regulator, AbrB family (TIGR) compare
DVU1971 +0.5 1.3 conserved domain protein (TIGR) compare
DVU2024 +0.5 2.6 conserved hypothetical protein (TIGR) compare
DVU1900 +0.5 2.5 conserved hypothetical protein (TIGR) compare
DVU0511 +0.5 1.1 conserved hypothetical protein (TIGR) compare
DVU0146 +0.5 1.9 hypothetical protein (TIGR) compare
DVU0499 +0.5 0.8 conserved hypothetical protein TIGR00149 (TIGR) compare
DVU2971 +0.5 2.3 glycosyl transferase, family 8 (TIGR) compare
DVU3351 queA +0.5 3.4 S-adenosylmethionine:tRNA ribosyltransferase-isomerase (TIGR) compare
DVU1272 gspE +0.5 3.1 general secretion pathway protein E, putative (TIGR) compare
DVU2676 +0.5 2.4 hypothetical protein (TIGR) compare
DVU0669 +0.4 1.2 hypothetical protein (TIGR) compare
DVU1939 +0.4 2.1 anaerobic glycerol-3-phosphate dehydrogenase, B subunit, putative (TIGR) compare
DVU1263 pppA +0.4 1.7 type IV prepilin-like proteins leader peptidase (TIGR) compare
DVU1639 +0.4 2.3 conserved domain protein (TIGR) compare
DVU1420 +0.4 0.6 Hpt domain protein (TIGR) compare
DVU1600 +0.4 2.5 adenylate cyclase (TIGR) compare
DVU2045 +0.4 1.8 hypothetical protein (TIGR) compare
DVU2877 +0.4 1.6 hypothetical protein (TIGR) compare
DVU2515 +0.4 2.4 HD domain protein (TIGR) compare
DVU1392 +0.4 2.9 NLP/P60 family protein (TIGR) compare
DVU2609 +0.4 3.3 chemotaxis MotB protein, putative (TIGR) compare
DORF10286 +0.4 2.8 no description compare
DVU2606 +0.4 0.9 hypothetical protein (TIGR) compare
DVU2582 +0.4 1.8 transcriptional regulator, TetR family (TIGR) compare
DVU1063 flrC +0.4 2.1 transcriptional regulatory protein (TIGR) compare
DVU2042 +0.4 1.6 Fic family protein (TIGR) compare
DVU3076 +0.4 1.9 conserved hypothetical protein (TIGR) compare
DVU2961 +0.4 1.8 hypothetical protein (TIGR) compare
DVU2454 +0.4 0.2 hypothetical protein (TIGR) compare
DVU2577 +0.4 1.2 DNA-binding response regulator, LuxR family (TIGR) compare
DVU1593 cheY-1 +0.4 1.2 chemotaxis protein CheY (TIGR) compare
DVU2012 +0.4 0.3 hypothetical protein (TIGR) compare
DVU1267 +0.4 2.1 hypothetical protein (TIGR) compare
DVU1174 +0.4 0.8 hypothetical protein (TIGR) compare
DVU1276 +0.4 2.7 hypothetical protein (TIGR) compare
DVU2873 +0.4 0.4 hypothetical protein (TIGR) compare
DVU2717 +0.4 1.3 hypothetical protein (TIGR) compare
DVU1944 oorD +0.4 0.7 pyruvate ferredoxin oxidoreductase, iron-sulfur binding subunit, putative (TIGR) compare
DVU3350 oorD +0.4 0.6 iron-sulfur cluster-binding protein (TIGR) compare
DVU1449 +0.4 2.3 anti-anti-sigma factor, putative (TIGR) compare
DVU2444 flaB3 +0.4 1.5 flagellin (TIGR) compare
DVU3200 recR +0.4 2.0 recombination protein RecR (TIGR) compare
DVU2777 +0.4 1.6 hypothetical protein (TIGR) compare
DVU2212 +0.4 2.4 conserved hypothetical protein (TIGR) compare
DVU0971 +0.4 2.4 molybdenum cofactor biosynthesis protein (TIGR) compare
DVU0032 +0.4 1.1 conserved hypothetical protein (TIGR) compare
DVU1447 +0.4 2.4 CgeB family protein (TIGR) compare
DORF11799 +0.4 1.3 no description compare
DORF807 +0.4 0.9 no description compare
DVU1551 +0.4 2.4 HD domain protein (TIGR) compare
DVU2539 +0.4 0.3 hypothetical protein (TIGR) compare
DVU2418 +0.4 1.3 vanZ-like family protein (TIGR) compare
DVU1264 +0.4 2.3 transglycosylase SLT domain protein (TIGR) compare
DVU0223 +0.4 0.4 conserved hypothetical protein (TIGR) compare
DVU1480 +0.4 1.6 conserved domain protein (TIGR) compare
DVU3027 glcD +0.4 0.8 glycolate oxidase, subunit GlcD (TIGR) compare
DVU3134 glpK +0.4 1.7 glycerol kinase (TIGR) compare
DVU1033 cinA +0.4 0.3 competence/damage-inducible protein CinA protein, truncation (TIGR) compare
DVU2904 +0.4 2.6 radical SAM enzyme, Cfr family (TIGR) compare
DVU2169 +0.4 1.4 conserved hypothetical protein (TIGR) compare
DVU1080 +0.4 1.3 iron-sulfur cluster-binding protein (TIGR) compare
DVU0339 serA +0.4 2.5 D-isomer specific 2-hydroxyacid dehydrogenase family protein (TIGR) compare
DVU0595 +0.4 1.4 conserved hypothetical protein (TIGR) compare
DORF37060 +0.4 1.8 no description compare
DVU1084 pstB-1 +0.4 2.0 phosphate ABC transporter, ATP-binding protein (TIGR) compare
DVU2907 umuD +0.4 2.2 umuD protein (TIGR) compare
DVU0769 +0.4 1.1 pyridoxal kinase, putative (TIGR) compare
DVU0939 +0.4 2.3 conserved hypothetical protein (TIGR) compare


Specific Phenotypes

None in this experiment

For Desulfovibrio vulgaris Hildenborough JW710 in nutrient experiments

For nutrient Sodium succinate dibasic hexahydrate across organisms