Experiment set14IT057 for Klebsiella michiganensis M5al

Compare to:

LB 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL

200 most important genes:

  gene name fitness t score description  
BWI76_RS20160 -5.3 -3.0 NADH-quinone oxidoreductase subunit H compare
BWI76_RS26455 -4.5 -1.8 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase compare
BWI76_RS26460 -4.5 -3.1 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
BWI76_RS15290 -4.2 -1.2 transcriptional regulator compare
BWI76_RS09335 -4.0 -1.2 baseplate assembly protein W compare
BWI76_RS08520 -3.9 -1.9 colicin transporter TolQ compare
BWI76_RS22690 -3.8 -2.4 adenylyl-sulfate kinase compare
BWI76_RS16360 -3.8 -1.1 electron transport complex subunit RsxB compare
BWI76_RS12145 -3.8 -2.1 hypothetical protein compare
BWI76_RS08405 -3.7 -2.4 succinate dehydrogenase flavoprotein subunit compare
BWI76_RS21070 -3.4 -1.7 outer membrane protein assembly factor BamB compare
BWI76_RS23490 -3.3 -6.4 fimbrial protein compare
BWI76_RS04705 -3.3 -3.8 DNA-binding transcriptional regulator FruR compare
BWI76_RS20360 -3.1 -0.9 cell division protein DedD compare
BWI76_RS04160 -3.1 -3.0 phosphoserine phosphatase compare
BWI76_RS19375 -3.1 -1.5 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase compare
BWI76_RS13160 -3.0 -1.5 azoreductase compare
BWI76_RS27425 -3.0 -1.4 DNA-directed RNA polymerase subunit omega compare
BWI76_RS15660 -2.9 -1.7 hypothetical protein compare
BWI76_RS00720 -2.9 -1.6 DNA-binding response regulator compare
BWI76_RS08525 -2.9 -1.3 colicin transporter compare
BWI76_RS09760 -2.8 -3.2 3-phosphoshikimate 1-carboxyvinyltransferase compare
BWI76_RS01350 -2.8 -0.8 NAD(P)H-flavin reductase compare
BWI76_RS07465 -2.8 -1.1 TetR family transcriptional regulator compare
BWI76_RS11815 -2.7 -1.1 hypothetical protein compare
BWI76_RS20750 -2.7 -0.8 carboxysome structural protein EutK compare
BWI76_RS24075 -2.7 -3.5 glutathione synthase compare
BWI76_RS01800 -2.7 -1.9 glucose-6-phosphate isomerase compare
BWI76_RS21660 -2.7 -1.3 antirestriction protein compare
BWI76_RS21450 -2.7 -2.1 23S rRNA pseudouridine(1911/1915/1917) synthase compare
BWI76_RS15605 -2.7 -2.2 hypothetical protein compare
BWI76_RS14320 -2.7 -1.7 hypothetical protein compare
BWI76_RS19010 -2.6 -1.8 polysaccharide pyruvyl transferase yvff compare
BWI76_RS16895 -2.6 -1.1 3-(3-hydroxy-phenyl)propionate transporter MhpT compare
BWI76_RS26470 -2.5 -4.6 4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase compare
BWI76_RS08210 -2.5 -1.0 N-acetylglucosamine-6-phosphate deacetylase compare
BWI76_RS21580 -2.5 -1.2 SsrA-binding protein compare
BWI76_RS01115 -2.5 -1.9 dTDP-4-amino-4,6-dideoxygalactose transaminase compare
BWI76_RS07740 -2.5 -1.0 Fe2+-enterobactin ABC transporter substrate-binding protein compare
BWI76_RS08535 -2.5 -1.2 translocation protein TolB compare
BWI76_RS20380 -2.5 -0.7 tRNA pseudouridine(38-40) synthase TruA compare
BWI76_RS01095 -2.5 -1.9 UDP-N-acetyl-D-mannosamine dehydrogenase compare
BWI76_RS12495 -2.4 -1.0 2-Cys peroxiredoxin compare
BWI76_RS08395 -2.4 -1.5 succinate dehydrogenase cytochrome b556 large subunit compare
BWI76_RS04645 -2.4 -2.8 3-dehydroquinase compare
BWI76_RS15825 -2.4 -0.9 hypothetical protein compare
BWI76_RS16275 -2.3 -2.4 fumarate hydratase FumA compare
BWI76_RS21345 -2.3 -2.2 sigma-E factor regulatory protein RseB compare
BWI76_RS01220 -2.3 -5.4 DNA-dependent helicase II compare
BWI76_RS00240 -2.3 -1.3 FMN-binding protein MioC compare
BWI76_RS19685 -2.3 -3.6 lysine transporter compare
BWI76_RS24740 -2.3 -2.6 GntR family transcriptional regulator compare
BWI76_RS02780 -2.2 -11.7 translocation and assembly module TamB compare
BWI76_RS07780 -2.2 -1.1 hypothetical protein compare
BWI76_RS09970 -2.2 -0.8 porin OmpA compare
BWI76_RS09615 -2.1 -2.2 ATP-dependent Clp protease ATP-binding subunit ClpA compare
BWI76_RS19905 -2.1 -3.5 OmpK36 porin compare
BWI76_RS18550 -2.1 -1.4 tRNA-Asn compare
BWI76_RS16490 -2.1 -1.2 glutaredoxin compare
BWI76_RS08605 -2.1 -1.4 phosphoglyceromutase compare
BWI76_RS01090 -2.1 -4.9 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) compare
BWI76_RS14305 -2.0 -3.7 metallophosphoesterase compare
BWI76_RS24605 -2.0 -4.7 dihydroxyacetone kinase subunit DhaM compare
BWI76_RS12345 -2.0 -2.9 nitrite transporter compare
BWI76_RS21350 -2.0 -1.4 anti-RNA polymerase sigma factor SigE compare
BWI76_RS07785 -2.0 -1.2 transcriptional regulator compare
BWI76_RS22935 -2.0 -1.4 L-fucose mutarotase compare
BWI76_RS00600 -1.9 -3.1 LacI family transcriptional regulator compare
BWI76_RS16375 -1.9 -2.2 electron transport complex subunit G compare
BWI76_RS01110 -1.9 -3.8 TDP-fucosamine acetyltransferase compare
BWI76_RS02530 -1.9 -1.2 tRNA dimethylallyltransferase compare
BWI76_RS13755 -1.9 -1.5 hypothetical protein compare
BWI76_RS19840 -1.9 -0.5 hypothetical protein compare
BWI76_RS01135 -1.9 -3.7 lipopolysaccharide N-acetylmannosaminouronosyltransferase compare
BWI76_RS00180 -1.9 -0.7 F0F1 ATP synthase subunit epsilon compare
BWI76_RS16920 -1.9 -1.0 3-(2,3-dihydroxyphenyl)propionate dioxygenase compare
BWI76_RS08380 -1.8 -1.0 endonuclease VIII compare
BWI76_RS25870 -1.8 -1.1 elongation factor Tu compare
BWI76_RS16965 -1.8 -1.5 murein lipoprotein compare
BWI76_RS17675 -1.8 -1.4 hypothetical protein compare
BWI76_RS08750 -1.8 -1.2 kinase inhibitor compare
BWI76_RS10035 -1.8 -1.4 hypothetical protein compare
BWI76_RS14770 -1.8 -0.9 PTS IIA 2 domain protein compare
BWI76_RS24885 -1.8 -0.8 PTS galactitol transporter subunit IIB compare
BWI76_RS23265 -1.8 -1.6 hypothetical protein compare
BWI76_RS01080 -1.7 -5.5 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase compare
BWI76_RS09455 -1.7 -2.6 YbjN domain-containing protein compare
BWI76_RS23365 -1.7 -2.1 LysR family transcriptional regulator compare
BWI76_RS13545 -1.7 -0.9 N-acetyltransferase compare
BWI76_RS20140 -1.7 -3.1 NADH-quinone oxidoreductase subunit L compare
BWI76_RS13920 -1.7 -4.5 magnesium-translocating P-type ATPase compare
BWI76_RS15360 -1.7 -2.1 hypothetical protein compare
BWI76_RS06535 -1.7 -2.2 endopeptidase La compare
BWI76_RS01565 -1.6 -1.6 NADH pyrophosphatase compare
BWI76_RS05260 -1.6 -1.0 chaperone compare
BWI76_RS01385 -1.6 -1.6 potassium transporter compare
BWI76_RS26095 -1.6 -0.6 shikimate kinase compare
BWI76_RS08530 -1.6 -1.1 protein TolA compare
BWI76_RS20180 -1.6 -3.3 NADH-quinone oxidoreductase subunit C/D compare
BWI76_RS13820 -1.6 -1.3 hypothetical protein compare
BWI76_RS23920 -1.6 -1.9 D-3-phosphoglycerate dehydrogenase compare
BWI76_RS21310 -1.6 -1.0 DNA repair protein RecO compare
BWI76_RS24900 -1.6 -0.9 DeoR family transcriptional regulator compare
BWI76_RS08425 -1.6 -2.0 succinyl-CoA ligase subunit beta compare
BWI76_RS24500 -1.6 -1.9 urease subunit gamma compare
BWI76_RS06680 -1.6 -0.9 hypothetical protein compare
BWI76_RS17975 -1.6 -3.0 tail-specific protease compare
BWI76_RS20150 -1.5 -1.6 NADH:ubiquinone oxidoreductase subunit J compare
BWI76_RS21340 -1.5 -1.2 SoxR reducing system protein RseC compare
BWI76_RS12265 -1.5 -2.7 hypothetical protein compare
BWI76_RS11205 -1.5 -2.2 transcription-repair coupling factor compare
BWI76_RS09190 -1.5 -1.7 hypothetical protein compare
BWI76_RS16955 -1.5 -0.7 hypothetical protein compare
BWI76_RS23495 -1.5 -4.9 hypothetical protein compare
BWI76_RS12260 -1.5 -2.7 hypothetical protein compare
BWI76_RS04525 -1.5 -1.2 4-hydroxythreonine-4-phosphate dehydrogenase PdxA compare
BWI76_RS17980 -1.5 -2.2 RNA chaperone ProQ compare
BWI76_RS13915 -1.5 -4.1 magnesium transport protein MgtC compare
BWI76_RS22755 -1.5 -2.9 phosphoadenosine phosphosulfate reductase compare
BWI76_RS15530 -1.5 -1.8 hypothetical protein compare
BWI76_RS10350 -1.5 -5.2 EamA family transporter compare
BWI76_RS25425 -1.5 -0.8 arginine repressor compare
BWI76_RS01125 -1.5 -3.5 4-alpha-L-fucosyltransferase compare
BWI76_RS06525 -1.4 -2.1 ATP-dependent Clp protease proteolytic subunit compare
BWI76_RS11035 -1.4 -2.1 putative LysR-family transcriptional regulator compare
BWI76_RS08980 -1.4 -1.0 DNA starvation/stationary phase protection protein compare
BWI76_RS05450 -1.4 -0.5 ribonuclease HI compare
BWI76_RS25335 -1.4 -1.1 stringent starvation protein A compare
BWI76_RS20130 -1.4 -2.2 NADH-quinone oxidoreductase subunit N compare
BWI76_RS11110 -1.4 -1.2 cell division protein YceG compare
BWI76_RS21565 -1.4 -0.7 outer membrane protein assembly factor BamE compare
BWI76_RS24600 -1.4 -1.8 dihydroxyacetone kinase compare
BWI76_RS00425 -1.4 -1.9 D-tyrosyl-tRNA(Tyr) deacylase compare
BWI76_RS14390 -1.4 -0.9 hypothetical protein compare
BWI76_RS12895 -1.4 -2.1 hypothetical protein compare
BWI76_RS12335 -1.4 -4.2 hypothetical protein compare
BWI76_RS02815 -1.4 -1.1 fructose-bisphosphatase class I compare
BWI76_RS26080 -1.4 -3.6 cell division protein DamX compare
BWI76_RS18780 -1.4 -2.4 D-alanyl-D-alanine carboxypeptidase compare
BWI76_RS05915 -1.4 -2.1 helix-turn-helix transcriptional regulator compare
BWI76_RS21680 -1.4 -2.6 antitoxin of the YeeV-YeeU toxin-antitoxin system compare
BWI76_RS11395 -1.4 -2.0 RNA polymerase sigma factor FecI compare
BWI76_RS09200 -1.4 -3.7 hypothetical protein compare
BWI76_RS00715 -1.4 -0.9 two-component sensor histidine kinase compare
BWI76_RS20490 -1.3 -1.8 hypothetical protein compare
BWI76_RS24400 -1.3 -2.1 outer membrane channel protein TolC compare
BWI76_RS16500 -1.3 -1.5 superoxide dismutase [Fe] compare
BWI76_RS00970 -1.3 -4.0 branched chain amino acid aminotransferase compare
BWI76_RS24580 -1.3 -3.1 PTS-dependent dihydroxyacetone kinase operon transcriptional regulator DhaR compare
BWI76_RS03295 -1.3 -0.9 transposase compare
BWI76_RS13130 -1.3 -1.6 phenylacetic acid degradation protein PaaD compare
BWI76_RS19900 -1.3 -2.1 FAD:protein FMN transferase compare
BWI76_RS23500 -1.3 -7.7 hypothetical protein compare
BWI76_RS15680 -1.3 -2.1 hypothetical protein compare
BWI76_RS15690 -1.3 -2.0 hypothetical protein compare
BWI76_RS01185 -1.3 -0.9 adenylate cyclase compare
BWI76_RS16480 -1.3 -1.4 lactoylglutathione lyase compare
BWI76_RS05120 -1.3 -3.0 bifunctional glycosyl transferase/transpeptidase compare
BWI76_RS15195 -1.3 -0.8 DUF4186 domain-containing protein compare
BWI76_RS26570 -1.3 -0.8 anion permease compare
BWI76_RS26605 -1.3 -3.1 16S rRNA (guanine(1516)-N(2))-methyltransferase compare
BWI76_RS20135 -1.3 -1.9 NADH-quinone oxidoreductase subunit M compare
BWI76_RS02610 -1.3 -2.5 transcriptional regulator compare
BWI76_RS07185 -1.3 -0.8 hypothetical protein compare
BWI76_RS23580 -1.2 -1.5 hypothetical protein compare
BWI76_RS08310 -1.2 -1.5 potassium-transporting ATPase subunit C compare
BWI76_RS00095 -1.2 -1.5 DNA-binding transcriptional regulator compare
BWI76_RS02680 -1.2 -2.0 EamA family transporter compare
BWI76_RS26665 -1.2 -2.0 DNA-binding response regulator compare
BWI76_RS26620 -1.2 -0.5 Fe-S biogenesis protein NfuA compare
BWI76_RS12090 -1.2 -0.8 HNH endonuclease compare
BWI76_RS22840 -1.2 -1.1 transposase compare
BWI76_RS00400 -1.2 -0.6 glutamine synthetase compare
BWI76_RS12180 -1.2 -3.4 membrane protein compare
BWI76_RS09755 -1.2 -1.4 phosphoserine transaminase compare
BWI76_RS10305 -1.2 -3.8 transposase compare
BWI76_RS15845 -1.2 -0.7 hypothetical protein compare
BWI76_RS19495 -1.2 -0.6 ABC transporter, quaternary amine uptake transporter (QAT) family, ATP-binding protein compare
BWI76_RS05075 -1.2 -0.6 type II secretion system protein GspG compare
BWI76_RS17720 -1.2 -0.3 muramoyltetrapeptide carboxypeptidase compare
BWI76_RS18470 -1.2 -1.6 hypothetical protein compare
BWI76_RS10245 -1.2 -1.5 aspartate aminotransferase compare
BWI76_RS12595 -1.2 -1.7 hypothetical protein compare
BWI76_RS26245 -1.2 -2.0 transcriptional regulator compare
BWI76_RS15115 -1.2 -0.8 MFS transporter compare
BWI76_RS26065 -1.2 -1.4 phosphoglycolate phosphatase compare
BWI76_RS02775 -1.2 -3.0 outer membrane protein assembly factor compare
BWI76_RS10625 -1.2 -5.4 hypothetical protein compare
BWI76_RS23330 -1.2 -1.9 transcriptional regulator GalR compare
BWI76_RS17370 -1.2 -1.2 nitrate transporter NasD compare
BWI76_RS08495 -1.2 -2.7 cytochrome bd-I ubiquinol oxidase subunit I compare
BWI76_RS14375 -1.2 -2.2 hypothetical protein compare
BWI76_RS23885 -1.2 -0.6 2-octaprenylphenol hydroxylase compare
BWI76_RS18565 -1.2 -1.4 pemk protein compare
BWI76_RS26075 -1.2 -0.8 DNA adenine methylase compare
BWI76_RS12040 -1.2 -0.9 hypothetical protein compare
BWI76_RS05025 -1.2 -1.9 2'-5' RNA ligase compare
BWI76_RS21250 -1.1 -3.2 two-component system response regulator GlrR compare
BWI76_RS16355 -1.1 -1.4 electron transport complex subunit A compare
BWI76_RS12240 -1.1 -3.0 terminase small subunit compare


Specific Phenotypes

None in this experiment

For Klebsiella michiganensis M5al in mixed community experiments

For mixed community Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL across organisms