Experiment set14IT055 for Klebsiella michiganensis M5al

Compare to:

LB 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL

200 most important genes:

  gene name fitness t score description  
BWI76_RS26455 -4.7 -1.8 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase compare
BWI76_RS23265 -4.3 -1.6 hypothetical protein compare
BWI76_RS26460 -4.2 -4.0 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
BWI76_RS08520 -4.2 -2.0 colicin transporter TolQ compare
BWI76_RS21070 -3.7 -1.8 outer membrane protein assembly factor BamB compare
BWI76_RS05015 -3.7 -2.0 transcriptional regulator compare
BWI76_RS25920 -3.6 -1.7 peptidylprolyl isomerase compare
BWI76_RS11300 -3.5 -1.0 cupin compare
BWI76_RS05260 -3.4 -1.3 chaperone compare
BWI76_RS14300 -3.3 -2.6 hypothetical protein compare
BWI76_RS27425 -3.1 -1.5 DNA-directed RNA polymerase subunit omega compare
BWI76_RS08525 -3.1 -1.4 colicin transporter compare
BWI76_RS07465 -3.0 -1.2 TetR family transcriptional regulator compare
BWI76_RS26470 -3.0 -5.0 4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase compare
BWI76_RS06535 -2.9 -2.0 endopeptidase La compare
BWI76_RS08530 -2.8 -1.5 protein TolA compare
BWI76_RS22690 -2.8 -3.0 adenylyl-sulfate kinase compare
BWI76_RS09640 -2.8 -1.8 cysteine/glutathione ABC transporter permease/ATP-binding protein CydD compare
BWI76_RS21310 -2.8 -1.3 DNA repair protein RecO compare
BWI76_RS21580 -2.7 -1.3 SsrA-binding protein compare
BWI76_RS08535 -2.7 -1.2 translocation protein TolB compare
BWI76_RS08210 -2.7 -1.0 N-acetylglucosamine-6-phosphate deacetylase compare
BWI76_RS15825 -2.7 -1.0 hypothetical protein compare
BWI76_RS01800 -2.7 -2.6 glucose-6-phosphate isomerase compare
BWI76_RS16965 -2.7 -2.4 murein lipoprotein compare
BWI76_RS13755 -2.7 -1.3 hypothetical protein compare
BWI76_RS02815 -2.6 -1.4 fructose-bisphosphatase class I compare
BWI76_RS01095 -2.6 -2.2 UDP-N-acetyl-D-mannosamine dehydrogenase compare
BWI76_RS06520 -2.6 -3.8 trigger factor compare
BWI76_RS16955 -2.6 -1.0 hypothetical protein compare
BWI76_RS17980 -2.6 -3.9 RNA chaperone ProQ compare
BWI76_RS21350 -2.5 -4.0 anti-RNA polymerase sigma factor SigE compare
BWI76_RS21075 -2.5 -1.6 membrane protein compare
BWI76_RS19770 -2.5 -1.6 bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase compare
BWI76_RS21370 -2.5 -0.9 ATP-dependent RNA helicase SrmB compare
BWI76_RS20230 -2.4 -1.3 hypothetical protein compare
BWI76_RS24605 -2.4 -5.2 dihydroxyacetone kinase subunit DhaM compare
BWI76_RS01870 -2.4 -4.0 diacylglycerol kinase compare
BWI76_RS08040 -2.3 -1.9 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH compare
BWI76_RS24580 -2.3 -3.7 PTS-dependent dihydroxyacetone kinase operon transcriptional regulator DhaR compare
BWI76_RS09615 -2.3 -2.3 ATP-dependent Clp protease ATP-binding subunit ClpA compare
BWI76_RS18815 -2.3 -2.4 nitrogenase molybdenum-iron protein alpha chain compare
BWI76_RS20900 -2.2 -0.8 outer membrane protein assembly factor BamC compare
BWI76_RS16425 -2.2 -3.2 hypothetical protein compare
BWI76_RS25870 -2.2 -1.3 elongation factor Tu compare
BWI76_RS05075 -2.2 -0.8 type II secretion system protein GspG compare
BWI76_RS00720 -2.2 -1.6 DNA-binding response regulator compare
BWI76_RS23365 -2.2 -4.2 LysR family transcriptional regulator compare
BWI76_RS20490 -2.2 -2.5 hypothetical protein compare
BWI76_RS04645 -2.2 -3.1 3-dehydroquinase compare
BWI76_RS27820 -2.1 -0.8 ilvB operon leader peptide IvbL compare
BWI76_RS26890 -2.1 -1.3 hypothetical protein compare
BWI76_RS02530 -2.1 -1.2 tRNA dimethylallyltransferase compare
BWI76_RS25335 -2.1 -1.5 stringent starvation protein A compare
BWI76_RS19840 -2.1 -0.5 hypothetical protein compare
BWI76_RS00875 -2.1 -3.6 DNA-binding transcriptional regulator FabR compare
BWI76_RS00240 -2.0 -1.4 FMN-binding protein MioC compare
BWI76_RS26665 -2.0 -3.1 DNA-binding response regulator compare
BWI76_RS22755 -2.0 -3.9 phosphoadenosine phosphosulfate reductase compare
BWI76_RS01385 -2.0 -2.3 potassium transporter compare
BWI76_RS06680 -2.0 -1.0 hypothetical protein compare
BWI76_RS00180 -2.0 -0.7 F0F1 ATP synthase subunit epsilon compare
BWI76_RS20135 -2.0 -2.1 NADH-quinone oxidoreductase subunit M compare
BWI76_RS01080 -2.0 -6.4 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase compare
BWI76_RS13420 -2.0 -1.6 ABC transporter permease compare
BWI76_RS20440 -2.0 -2.4 50S ribosomal protein L3 N(5)-glutamine methyltransferase compare
BWI76_RS16485 -1.9 -1.3 ribonuclease T compare
BWI76_RS10060 -1.9 -1.5 acylphosphatase compare
BWI76_RS01110 -1.9 -5.0 TDP-fucosamine acetyltransferase compare
BWI76_RS14305 -1.9 -3.7 metallophosphoesterase compare
BWI76_RS13560 -1.9 -0.7 amino acid ABC transporter substrate-binding subunit compare
BWI76_RS02610 -1.9 -4.1 transcriptional regulator compare
BWI76_RS09970 -1.9 -0.9 porin OmpA compare
BWI76_RS08405 -1.9 -2.2 succinate dehydrogenase flavoprotein subunit compare
BWI76_RS05120 -1.9 -6.0 bifunctional glycosyl transferase/transpeptidase compare
BWI76_RS21375 -1.9 -0.7 autonomous glycyl radical cofactor GrcA compare
BWI76_RS09825 -1.9 -5.3 envelope biogenesis factor ElyC compare
BWI76_RS06475 -1.9 -1.1 protoheme IX farnesyltransferase compare
BWI76_RS21345 -1.9 -2.1 sigma-E factor regulatory protein RseB compare
BWI76_RS09760 -1.8 -2.2 3-phosphoshikimate 1-carboxyvinyltransferase compare
BWI76_RS23360 -1.8 -1.3 diaminopimelate decarboxylase compare
BWI76_RS20130 -1.8 -4.3 NADH-quinone oxidoreductase subunit N compare
BWI76_RS01135 -1.8 -4.3 lipopolysaccharide N-acetylmannosaminouronosyltransferase compare
BWI76_RS12495 -1.8 -1.0 2-Cys peroxiredoxin compare
BWI76_RS08500 -1.8 -2.1 cytochrome d ubiquinol oxidase subunit 2 compare
BWI76_RS11980 -1.7 -1.1 DeoR family transcriptional regulator compare
BWI76_RS24740 -1.7 -2.7 GntR family transcriptional regulator compare
BWI76_RS23515 -1.7 -2.7 antibiotic biosynthesis monooxygenase compare
BWI76_RS01115 -1.7 -1.8 dTDP-4-amino-4,6-dideoxygalactose transaminase compare
BWI76_RS10955 -1.7 -1.4 hypothetical protein compare
BWI76_RS11155 -1.7 -2.1 penicillin-binding protein activator LpoB compare
BWI76_RS26095 -1.7 -0.6 shikimate kinase compare
BWI76_RS24900 -1.7 -0.9 DeoR family transcriptional regulator compare
BWI76_RS26670 -1.6 -5.3 two-component sensor histidine kinase compare
BWI76_RS15350 -1.6 -0.8 hypothetical protein compare
BWI76_RS01125 -1.6 -4.0 4-alpha-L-fucosyltransferase compare
BWI76_RS18885 -1.6 -2.6 nitrogen fixation regulatory protein compare
BWI76_RS09335 -1.6 -0.9 baseplate assembly protein W compare
BWI76_RS27440 -1.6 -1.1 DNA helicase RecG compare
BWI76_RS04705 -1.6 -3.5 DNA-binding transcriptional regulator FruR compare
BWI76_RS20720 -1.6 -1.1 hypothetical protein compare
BWI76_RS19730 -1.6 -3.1 1-phosphofructokinase compare
BWI76_RS24400 -1.5 -2.5 outer membrane channel protein TolC compare
BWI76_RS25700 -1.5 -4.7 heavy metal-responsive transcriptional regulator compare
BWI76_RS15110 -1.5 -3.1 putative excinuclease ABC subunit A compare
BWI76_RS16315 -1.5 -1.1 SirA-like protein compare
BWI76_RS15115 -1.5 -1.0 MFS transporter compare
BWI76_RS23495 -1.5 -4.6 hypothetical protein compare
BWI76_RS00715 -1.5 -1.0 two-component sensor histidine kinase compare
BWI76_RS09730 -1.5 -0.7 pyruvate formate lyase 1-activating protein compare
BWI76_RS09645 -1.5 -0.5 thioredoxin-disulfide reductase compare
BWI76_RS07185 -1.4 -0.8 hypothetical protein compare
BWI76_RS23490 -1.4 -3.1 fimbrial protein compare
BWI76_RS22090 -1.4 -1.4 transcriptional regulator compare
BWI76_RS14005 -1.4 -1.1 TetR family transcriptional regulator compare
BWI76_RS19010 -1.4 -2.2 polysaccharide pyruvyl transferase yvff compare
BWI76_RS07785 -1.4 -1.3 transcriptional regulator compare
BWI76_RS15920 -1.4 -1.0 hypothetical protein compare
BWI76_RS25070 -1.4 -1.1 hypothetical protein compare
BWI76_RS17975 -1.4 -2.6 tail-specific protease compare
BWI76_RS19035 -1.4 -4.8 dTDP-rhamnosyl transferase compare
BWI76_RS13595 -1.4 -2.9 transcriptional regulator compare
BWI76_RS10305 -1.4 -5.0 transposase compare
BWI76_RS01185 -1.4 -0.9 adenylate cyclase compare
BWI76_RS16920 -1.4 -1.0 3-(2,3-dihydroxyphenyl)propionate dioxygenase compare
BWI76_RS09190 -1.4 -1.3 hypothetical protein compare
BWI76_RS24770 -1.4 -2.4 hypothetical protein compare
BWI76_RS10900 -1.4 -2.2 putative oxidoreductase compare
BWI76_RS26775 -1.4 -3.7 endo-1,4-D-glucanase compare
BWI76_RS12090 -1.4 -1.7 HNH endonuclease compare
BWI76_RS15530 -1.4 -2.4 hypothetical protein compare
BWI76_RS17720 -1.4 -0.3 muramoyltetrapeptide carboxypeptidase compare
BWI76_RS01090 -1.4 -3.2 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) compare
BWI76_RS05005 -1.4 -1.8 polynucleotide adenylyltransferase compare
BWI76_RS26570 -1.3 -0.9 anion permease compare
BWI76_RS20170 -1.3 -3.6 NADH-quinone oxidoreductase subunit F compare
BWI76_RS21450 -1.3 -1.6 23S rRNA pseudouridine(1911/1915/1917) synthase compare
BWI76_RS22805 -1.3 -5.5 GTP diphosphokinase compare
BWI76_RS11170 -1.3 -0.9 hypothetical protein compare
BWI76_RS10935 -1.3 -3.1 glucan biosynthesis glucosyltransferase H compare
BWI76_RS09735 -1.3 -3.0 formate acetyltransferase compare
BWI76_RS21260 -1.3 -3.9 two-component sensor histidine kinase compare
BWI76_RS00400 -1.3 -0.6 glutamine synthetase compare
BWI76_RS08395 -1.3 -1.2 succinate dehydrogenase cytochrome b556 large subunit compare
BWI76_RS17530 -1.3 -2.5 hypothetical protein compare
BWI76_RS27915 -1.3 -1.4 YceK/YidQ family lipoprotein compare
BWI76_RS26730 -1.3 -4.0 inner membrane protein YhjD compare
BWI76_RS11250 -1.3 -1.4 spermidine/putrescine ABC transporter permease PotB compare
BWI76_RS18070 -1.3 -2.4 DNA polymerase III subunit epsilon compare
BWI76_RS20475 -1.3 -2.3 phospholipid-binding lipoprotein MlaA compare
BWI76_RS01220 -1.3 -2.7 DNA-dependent helicase II compare
BWI76_RS23500 -1.3 -8.4 hypothetical protein compare
BWI76_RS14105 -1.3 -2.4 NADH:ubiquinone reductase (Na(+)-transporting) subunit E compare
BWI76_RS09610 -1.3 -2.4 ATP-dependent Clp protease adaptor ClpS compare
BWI76_RS13920 -1.3 -4.3 magnesium-translocating P-type ATPase compare
BWI76_RS21780 -1.3 -2.5 S-(hydroxymethyl)glutathione synthase compare
BWI76_RS00600 -1.3 -3.1 LacI family transcriptional regulator compare
BWI76_RS21570 -1.3 -1.0 RnfH family protein compare
BWI76_RS18605 -1.3 -1.3 oxidoreductase molybdopterin-binding protein compare
BWI76_RS20180 -1.3 -3.8 NADH-quinone oxidoreductase subunit C/D compare
BWI76_RS18470 -1.2 -2.0 hypothetical protein compare
BWI76_RS14770 -1.2 -0.8 PTS IIA 2 domain protein compare
BWI76_RS04815 -1.2 -1.2 cell division protein ZapD compare
BWI76_RS01200 -1.2 -0.7 diaminopimelate epimerase compare
BWI76_RS12280 -1.2 -2.9 hypothetical protein compare
BWI76_RS00965 -1.2 -0.5 acetolactate synthase 2 small subunit compare
BWI76_RS23655 -1.2 -2.3 DeoR family transcriptional regulator compare
BWI76_RS19850 -1.2 -1.8 tRNA-Pro compare
BWI76_RS15670 -1.2 -3.6 hypothetical protein compare
BWI76_RS06400 -1.2 -1.3 oxidative-stress-resistance chaperone compare
BWI76_RS11110 -1.2 -1.6 cell division protein YceG compare
BWI76_RS00355 -1.2 -1.0 DNA polymerase I compare
BWI76_RS20155 -1.2 -0.8 NADH-quinone oxidoreductase subunit I compare
BWI76_RS20150 -1.2 -1.2 NADH:ubiquinone oxidoreductase subunit J compare
BWI76_RS16720 -1.2 -1.4 hypothetical protein compare
BWI76_RS12400 -1.2 -3.9 TetR family transcriptional regulator compare
BWI76_RS18905 -1.2 -2.1 putrescine/spermidine ABC transporter compare
BWI76_RS02680 -1.2 -1.9 EamA family transporter compare
BWI76_RS04525 -1.1 -1.1 4-hydroxythreonine-4-phosphate dehydrogenase PdxA compare
BWI76_RS07070 -1.1 -2.1 5-(carboxyamino)imidazole ribonucleotide mutase compare
BWI76_RS09755 -1.1 -1.8 phosphoserine transaminase compare
BWI76_RS08330 -1.1 -0.9 hypothetical protein compare
BWI76_RS19905 -1.1 -2.2 OmpK36 porin compare
BWI76_RS19040 -1.1 -4.5 hypothetical protein compare
BWI76_RS25600 -1.1 -0.6 tRNA-Thr compare
BWI76_RS05840 -1.1 -1.7 glutamate 5-kinase compare
BWI76_RS12340 -1.1 -2.5 molecular chaperone Tir compare
BWI76_RS26075 -1.1 -1.0 DNA adenine methylase compare
BWI76_RS02575 -1.1 -3.9 exoribonuclease R compare
BWI76_RS10625 -1.1 -5.0 hypothetical protein compare
BWI76_RS16275 -1.1 -1.9 fumarate hydratase FumA compare
BWI76_RS14835 -1.1 -1.2 hypothetical protein compare
BWI76_RS14390 -1.1 -0.8 hypothetical protein compare
BWI76_RS12750 -1.1 -2.3 hypothetical protein compare
BWI76_RS23830 -1.1 -3.3 hypothetical protein compare
BWI76_RS15535 -1.1 -1.6 hypothetical protein compare
BWI76_RS12320 -1.1 -3.7 hypothetical protein compare
BWI76_RS03225 -1.1 -4.3 transcriptional regulator compare
BWI76_RS13160 -1.1 -1.0 azoreductase compare
BWI76_RS24280 -1.1 -2.0 biopolymer transporter ExbB compare


Specific Phenotypes

None in this experiment

For Klebsiella michiganensis M5al in mixed community experiments

For mixed community Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL across organisms