Experiment set14IT052 for Klebsiella michiganensis M5al

Compare to:

Fungal_growth_media_mCAFEs_v1 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL

200 most important genes:

  gene name fitness t score description  
BWI76_RS18930 -7.2 -4.9 histidinol-phosphate transaminase compare
BWI76_RS04250 -6.9 -6.8 homoserine kinase compare
BWI76_RS26425 -6.6 -4.5 zinc/cadmium/mercury/lead-transporting ATPase compare
BWI76_RS18940 -6.4 -4.7 imidazole glycerol phosphate synthase subunit HisH compare
BWI76_RS18935 -6.3 -7.8 bifunctional imidazole glycerol-phosphate dehydratase/histidinol phosphatase compare
BWI76_RS20350 -6.2 -9.1 amidophosphoribosyltransferase compare
BWI76_RS18925 -5.9 -7.4 histidinol dehydrogenase compare
BWI76_RS25700 -5.9 -5.7 heavy metal-responsive transcriptional regulator compare
BWI76_RS21350 -5.8 -5.1 anti-RNA polymerase sigma factor SigE compare
BWI76_RS04465 -5.8 -5.6 carbamoyl-phosphate synthase small subunit compare
BWI76_RS07070 -5.5 -3.8 5-(carboxyamino)imidazole ribonucleotide mutase compare
BWI76_RS02995 -5.5 -7.8 aspartate carbamoyltransferase compare
BWI76_RS20355 -5.5 -4.0 colicin V production protein compare
BWI76_RS04245 -5.4 -15.2 bifunctional aspartate kinase/homoserine dehydrogenase I compare
BWI76_RS17975 -5.2 -3.6 tail-specific protease compare
BWI76_RS11965 -5.1 -4.5 orotidine-5'-phosphate decarboxylase compare
BWI76_RS04470 -5.1 -7.8 carbamoyl phosphate synthase large subunit compare
BWI76_RS18955 -5.1 -4.7 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase compare
BWI76_RS20895 -5.1 -3.5 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
BWI76_RS00855 -5.0 -10.7 argininosuccinate lyase compare
BWI76_RS01115 -4.9 -2.5 dTDP-4-amino-4,6-dideoxygalactose transaminase compare
BWI76_RS01095 -4.9 -2.6 UDP-N-acetyl-D-mannosamine dehydrogenase compare
BWI76_RS03010 -4.9 -9.8 ornithine carbamoyltransferase compare
BWI76_RS26460 -4.8 -3.3 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
BWI76_RS26455 -4.7 -2.0 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase compare
BWI76_RS27390 -4.7 -6.1 ribonuclease PH compare
BWI76_RS20965 -4.7 -4.3 phosphoribosylformylglycinamidine cyclo-ligase compare
BWI76_RS00975 -4.6 -13.0 dihydroxy-acid dehydratase compare
BWI76_RS11840 -4.6 -4.7 tryptophan synthase subunit alpha compare
BWI76_RS21265 -4.6 -16.6 phosphoribosylformylglycinamidine synthase compare
BWI76_RS05260 -4.5 -1.4 chaperone compare
BWI76_RS11855 -4.5 -7.1 bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase compare
BWI76_RS01610 -4.5 -6.4 phosphoribosylamine--glycine ligase compare
BWI76_RS04255 -4.4 -12.3 threonine synthase compare
BWI76_RS01615 -4.4 -9.0 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase compare
BWI76_RS00850 -4.4 -11.7 acetylglutamate kinase compare
BWI76_RS18920 -4.3 -3.5 ATP phosphoribosyltransferase compare
BWI76_RS11860 -4.3 -10.6 anthranilate synthase component I compare
BWI76_RS07065 -4.3 -8.0 5-(carboxyamino)imidazole ribonucleotide synthase compare
BWI76_RS09910 -4.3 -17.2 dihydroorotate dehydrogenase (quinone) compare
BWI76_RS18950 -4.3 -5.9 imidazole glycerol phosphate synthase cyclase subunit compare
BWI76_RS00835 -4.2 -14.1 phosphoenolpyruvate carboxylase compare
BWI76_RS23265 -4.2 -1.8 hypothetical protein compare
BWI76_RS08385 -4.2 -3.1 citrate (Si)-synthase compare
BWI76_RS08520 -4.1 -2.1 colicin transporter TolQ compare
BWI76_RS04675 -4.1 -8.0 3-isopropylmalate dehydrogenase compare
BWI76_RS22755 -4.1 -3.9 phosphoadenosine phosphosulfate reductase compare
BWI76_RS23220 -4.1 -11.1 amino-acid N-acetyltransferase compare
BWI76_RS21345 -4.0 -1.9 sigma-E factor regulatory protein RseB compare
BWI76_RS11850 -3.9 -8.4 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase compare
BWI76_RS00845 -3.9 -13.6 N-acetyl-gamma-glutamyl-phosphate reductase compare
BWI76_RS04670 -3.9 -14.5 3-isopropylmalate dehydratase large subunit compare
BWI76_RS09760 -3.9 -2.7 3-phosphoshikimate 1-carboxyvinyltransferase compare
BWI76_RS00785 -3.9 -5.2 cystathionine gamma-synthase compare
BWI76_RS23365 -3.9 -4.2 LysR family transcriptional regulator compare
BWI76_RS10990 -3.8 -2.6 dihydroorotase compare
BWI76_RS00990 -3.8 -12.4 ketol-acid reductoisomerase compare
BWI76_RS16965 -3.8 -2.2 murein lipoprotein compare
BWI76_RS21475 -3.8 -2.6 bifunctional chorismate mutase/prephenate dehydrogenase compare
BWI76_RS25645 -3.7 -6.5 shikimate dehydrogenase compare
BWI76_RS05015 -3.6 -2.2 transcriptional regulator compare
BWI76_RS27385 -3.6 -7.1 orotate phosphoribosyltransferase compare
BWI76_RS25335 -3.6 -1.8 stringent starvation protein A compare
BWI76_RS26000 -3.5 -9.4 aspartate aminotransferase family protein compare
BWI76_RS04665 -3.5 -19.7 3-isopropylmalate dehydratase small subunit compare
BWI76_RS01655 -3.4 -12.7 homoserine O-succinyltransferase compare
BWI76_RS08530 -3.4 -1.5 protein TolA compare
BWI76_RS22765 -3.4 -9.7 sulfite reductase subunit alpha compare
BWI76_RS26670 -3.3 -8.2 two-component sensor histidine kinase compare
BWI76_RS00980 -3.3 -14.3 PLP-dependent threonine dehydratase compare
BWI76_RS05835 -3.3 -2.0 gamma-glutamyl-phosphate reductase compare
BWI76_RS25115 -3.3 -6.8 argininosuccinate synthase compare
BWI76_RS22760 -3.2 -7.0 sulfite reductase subunit beta compare
BWI76_RS00805 -3.2 -4.4 5,10-methylenetetrahydrofolate reductase compare
BWI76_RS27425 -3.2 -1.6 DNA-directed RNA polymerase subunit omega compare
BWI76_RS04525 -3.2 -1.8 4-hydroxythreonine-4-phosphate dehydrogenase PdxA compare
BWI76_RS01080 -3.2 -9.8 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase compare
BWI76_RS04240 -3.2 -1.8 thr operon leader peptide compare
BWI76_RS05840 -3.2 -3.0 glutamate 5-kinase compare
BWI76_RS26730 -3.1 -9.1 inner membrane protein YhjD compare
BWI76_RS00965 -3.1 -0.9 acetolactate synthase 2 small subunit compare
BWI76_RS08525 -3.0 -1.4 colicin transporter compare
BWI76_RS21075 -3.0 -1.5 membrane protein compare
BWI76_RS26665 -3.0 -3.8 DNA-binding response regulator compare
BWI76_RS07465 -3.0 -1.2 TetR family transcriptional regulator compare
BWI76_RS01110 -2.9 -5.2 TDP-fucosamine acetyltransferase compare
BWI76_RS01800 -2.9 -2.0 glucose-6-phosphate isomerase compare
BWI76_RS20440 -2.9 -2.9 50S ribosomal protein L3 N(5)-glutamine methyltransferase compare
BWI76_RS22090 -2.9 -1.9 transcriptional regulator compare
BWI76_RS14320 -2.8 -1.9 hypothetical protein compare
BWI76_RS06535 -2.8 -1.9 endopeptidase La compare
BWI76_RS11845 -2.8 -2.1 tryptophan synthase subunit beta compare
BWI76_RS24285 -2.8 -11.4 cystathionine beta-lyase compare
BWI76_RS26390 -2.8 -7.4 cell division protein FtsX compare
BWI76_RS21465 -2.8 -4.3 bifunctional chorismate mutase/prephenate dehydratase compare
BWI76_RS25060 -2.8 -5.9 lipoprotein NlpI compare
BWI76_RS26620 -2.8 -0.8 Fe-S biogenesis protein NfuA compare
BWI76_RS26395 -2.7 -7.1 cell division protein FtsE compare
BWI76_RS01135 -2.7 -5.6 lipopolysaccharide N-acetylmannosaminouronosyltransferase compare
BWI76_RS21580 -2.7 -1.4 SsrA-binding protein compare
BWI76_RS08535 -2.6 -1.3 translocation protein TolB compare
BWI76_RS04685 -2.6 -8.2 putative leucine operon leader peptide compare
BWI76_RS08210 -2.6 -1.1 N-acetylglucosamine-6-phosphate deacetylase compare
BWI76_RS16425 -2.6 -3.2 hypothetical protein compare
BWI76_RS09640 -2.6 -1.8 cysteine/glutathione ABC transporter permease/ATP-binding protein CydD compare
BWI76_RS11980 -2.6 -1.5 DeoR family transcriptional regulator compare
BWI76_RS20380 -2.6 -0.7 tRNA pseudouridine(38-40) synthase TruA compare
BWI76_RS09645 -2.5 -0.7 thioredoxin-disulfide reductase compare
BWI76_RS09755 -2.5 -2.4 phosphoserine transaminase compare
BWI76_RS23920 -2.5 -2.7 D-3-phosphoglycerate dehydrogenase compare
BWI76_RS00240 -2.5 -1.4 FMN-binding protein MioC compare
BWI76_RS19905 -2.4 -4.8 OmpK36 porin compare
BWI76_RS14300 -2.4 -2.2 hypothetical protein compare
BWI76_RS20390 -2.4 -4.0 erythronate-4-phosphate dehydrogenase compare
BWI76_RS21370 -2.4 -1.0 ATP-dependent RNA helicase SrmB compare
BWI76_RS00720 -2.4 -1.9 DNA-binding response regulator compare
BWI76_RS00345 -2.4 -3.8 protein disulfide oxidoreductase DsbA compare
BWI76_RS19770 -2.3 -1.2 bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase compare
BWI76_RS21070 -2.3 -1.6 outer membrane protein assembly factor BamB compare
BWI76_RS04680 -2.3 -9.2 2-isopropylmalate synthase compare
BWI76_RS09655 -2.3 -4.2 leucine-responsive regulatory protein compare
BWI76_RS01125 -2.2 -4.8 4-alpha-L-fucosyltransferase compare
BWI76_RS04990 -2.2 -4.3 pantoate--beta-alanine ligase compare
BWI76_RS14065 -2.2 -1.9 hypothetical protein compare
BWI76_RS10305 -2.2 -6.2 transposase compare
BWI76_RS26470 -2.2 -4.3 4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase compare
BWI76_RS08580 -2.2 -2.6 quinolinate synthetase compare
BWI76_RS27915 -2.2 -1.9 YceK/YidQ family lipoprotein compare
BWI76_RS20900 -2.1 -0.8 outer membrane protein assembly factor BamC compare
BWI76_RS04100 -2.1 -3.2 peptide chain release factor 3 compare
BWI76_RS05915 -2.1 -2.8 helix-turn-helix transcriptional regulator compare
BWI76_RS02530 -2.1 -1.4 tRNA dimethylallyltransferase compare
BWI76_RS24605 -2.1 -4.8 dihydroxyacetone kinase subunit DhaM compare
BWI76_RS23360 -2.1 -1.2 diaminopimelate decarboxylase compare
BWI76_RS25960 -2.1 -3.2 NUDIX hydrolase compare
BWI76_RS04645 -2.1 -3.3 3-dehydroquinase compare
BWI76_RS21165 -2.1 -1.4 Fe-S cluster assembly transcriptional regulator IscR compare
BWI76_RS08760 -2.1 -4.8 biotin synthase compare
BWI76_RS22690 -2.1 -1.8 adenylyl-sulfate kinase compare
BWI76_RS25315 -2.1 -10.7 glutamate synthase large subunit compare
BWI76_RS25065 -2.0 -2.9 polyribonucleotide nucleotidyltransferase compare
BWI76_RS15825 -2.0 -1.2 hypothetical protein compare
BWI76_RS24340 -2.0 -3.3 two-component sensor histidine kinase compare
BWI76_RS00180 -2.0 -0.8 F0F1 ATP synthase subunit epsilon compare
BWI76_RS24595 -2.0 -3.1 dihydroxyacetone kinase subunit DhaK compare
BWI76_RS20360 -1.9 -0.8 cell division protein DedD compare
BWI76_RS24580 -1.9 -3.4 PTS-dependent dihydroxyacetone kinase operon transcriptional regulator DhaR compare
BWI76_RS19840 -1.9 -0.5 hypothetical protein compare
BWI76_RS06525 -1.9 -2.8 ATP-dependent Clp protease proteolytic subunit compare
BWI76_RS21460 -1.9 -1.1 translation inhibitor protein RaiA compare
BWI76_RS00390 -1.9 -5.5 two-component system sensor histidine kinase NtrB compare
BWI76_RS18605 -1.9 -1.5 oxidoreductase molybdopterin-binding protein compare
BWI76_RS02775 -1.9 -5.1 outer membrane protein assembly factor compare
BWI76_RS23985 -1.9 -7.6 erythrose-4-phosphate dehydrogenase compare
BWI76_RS10930 -1.9 -7.4 glucan biosynthesis protein G compare
BWI76_RS25320 -1.8 -7.6 glutamate synthase compare
BWI76_RS01170 -1.8 -2.1 uroporphyrinogen-III C-methyltransferase compare
BWI76_RS21310 -1.8 -1.2 DNA repair protein RecO compare
BWI76_RS00960 -1.8 -5.0 acetolactate synthase 2 catalytic subunit compare
BWI76_RS02780 -1.8 -9.1 translocation and assembly module TamB compare
BWI76_RS27235 -1.8 -10.0 murein hydrolase activator EnvC compare
BWI76_RS26440 -1.8 -1.1 hypothetical protein compare
BWI76_RS01090 -1.8 -3.7 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) compare
BWI76_RS13560 -1.7 -0.7 amino acid ABC transporter substrate-binding subunit compare
BWI76_RS06530 -1.7 -4.5 ATP-dependent Clp protease ATP-binding subunit ClpX compare
BWI76_RS02550 -1.7 -3.8 protease modulator HflC compare
BWI76_RS27440 -1.7 -1.2 DNA helicase RecG compare
BWI76_RS19010 -1.7 -2.2 polysaccharide pyruvyl transferase yvff compare
BWI76_RS16485 -1.7 -1.2 ribonuclease T compare
BWI76_RS01220 -1.7 -4.9 DNA-dependent helicase II compare
BWI76_RS24900 -1.7 -1.0 DeoR family transcriptional regulator compare
BWI76_RS15680 -1.7 -4.3 hypothetical protein compare
BWI76_RS00875 -1.7 -2.4 DNA-binding transcriptional regulator FabR compare
BWI76_RS24850 -1.7 -4.7 DeoR family transcriptional regulator compare
BWI76_RS24385 -1.6 -5.0 phosphodiesterase compare
BWI76_RS08495 -1.6 -3.0 cytochrome bd-I ubiquinol oxidase subunit I compare
BWI76_RS01275 -1.6 -6.1 LysR family transcriptional regulator compare
BWI76_RS02545 -1.6 -4.3 protease modulator HflK compare
BWI76_RS24600 -1.6 -1.5 dihydroxyacetone kinase compare
BWI76_RS10935 -1.6 -3.0 glucan biosynthesis glucosyltransferase H compare
BWI76_RS22805 -1.6 -5.4 GTP diphosphokinase compare
BWI76_RS01900 -1.6 -4.1 tRNA-dihydrouridine synthase A compare
BWI76_RS04985 -1.6 -4.9 aspartate 1-decarboxylase compare
BWI76_RS24770 -1.6 -2.1 hypothetical protein compare
BWI76_RS14005 -1.6 -1.2 TetR family transcriptional regulator compare
BWI76_RS04160 -1.6 -1.9 phosphoserine phosphatase compare
BWI76_RS04995 -1.6 -4.5 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
BWI76_RS03225 -1.6 -5.3 transcriptional regulator compare
BWI76_RS00355 -1.6 -1.0 DNA polymerase I compare
BWI76_RS15920 -1.6 -1.1 hypothetical protein compare
BWI76_RS16195 -1.6 -1.5 hypothetical protein compare
BWI76_RS16910 -1.6 -1.7 2-keto-4-pentenoate hydratase compare
BWI76_RS05880 -1.5 -1.6 AraC-type DNA-binding domain-containing protein compare
BWI76_RS16635 -1.5 -3.7 carbonate dehydratase compare
BWI76_RS05120 -1.5 -4.2 bifunctional glycosyl transferase/transpeptidase compare
BWI76_RS06475 -1.5 -1.2 protoheme IX farnesyltransferase compare
BWI76_RS21235 -1.5 -0.8 hypothetical protein compare
BWI76_RS01540 -1.5 -2.2 thiamine biosynthesis protein ThiS compare
BWI76_RS11300 -1.5 -0.7 cupin compare
BWI76_RS02735 -1.5 -1.9 3'(2'),5'-bisphosphate nucleotidase CysQ compare


Specific Phenotypes

For 2 genes in this experiment

For mixed community Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL in Klebsiella michiganensis M5al

For mixed community Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL across organisms