Experiment set14IT052 for Klebsiella michiganensis M5al

Compare to:

Fungal_growth_media_mCAFEs_v1 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL

200 most detrimental genes:

  gene name fitness t score description  
BWI76_RS00025 +3.4 4.9 hypothetical protein compare
BWI76_RS05235 +2.0 2.1 hypothetical protein compare
BWI76_RS05950 +1.9 3.7 polar amino acid ABC transporter inner membrane subunit compare
BWI76_RS01585 +1.9 5.4 transcriptional regulator compare
BWI76_RS07725 +1.9 2.5 iron-enterobactin transporter permease compare
BWI76_RS20795 +1.9 3.0 ethanolamine catabolic microcompartment shell protein EutN compare
BWI76_RS06400 +1.7 3.1 oxidative-stress-resistance chaperone compare
BWI76_RS01225 +1.5 6.3 magnesium transporter CorA compare
BWI76_RS23895 +1.5 1.2 Xaa-Pro aminopeptidase compare
BWI76_RS24885 +1.4 1.2 PTS galactitol transporter subunit IIB compare
BWI76_RS21540 +1.3 5.9 membrane protein compare
BWI76_RS19585 +1.3 2.3 gentisate 1,2-dioxygenase compare
BWI76_RS18550 +1.3 2.3 tRNA-Asn compare
BWI76_RS13215 +1.3 2.2 type I glyceraldehyde-3-phosphate dehydrogenase compare
BWI76_RS14670 +1.3 1.9 hypothetical protein compare
BWI76_RS19700 +1.3 2.3 deoxyribonuclease IV compare
BWI76_RS06335 +1.3 2.0 nucleoside-specific channel-forming protein Tsx compare
BWI76_RS00865 +1.3 4.7 DNA-binding transcriptional regulator OxyR compare
BWI76_RS23320 +1.2 1.8 hypothetical protein compare
BWI76_RS08120 +1.2 3.3 cobalt transporter compare
BWI76_RS14775 +1.2 3.0 creatinine amidohydrolase compare
BWI76_RS26405 +1.2 2.4 16S rRNA (guanine(966)-N(2))-methyltransferase compare
BWI76_RS19310 +1.2 3.7 ABC transporter permease compare
BWI76_RS17190 +1.2 1.6 TonB system transport protein TonB compare
BWI76_RS23250 +1.2 2.7 hypothetical protein compare
BWI76_RS19465 +1.2 1.9 hypothetical protein compare
BWI76_RS07740 +1.1 1.3 Fe2+-enterobactin ABC transporter substrate-binding protein compare
BWI76_RS11150 +1.1 1.2 membrane protein compare
BWI76_RS19240 +1.1 2.1 ABC transporter substrate-binding protein compare
BWI76_RS17400 +1.1 1.3 transporter compare
BWI76_RS11810 +1.1 1.4 outer membrane protein OmpW compare
BWI76_RS11675 +1.1 3.0 arginine N-succinyltransferase compare
BWI76_RS23190 +1.1 3.3 propanediol utilization protein PduU compare
BWI76_RS13480 +1.1 1.1 XRE family transcriptional regulator compare
BWI76_RS08835 +1.1 2.8 molybdopterin guanine dinucleotide biosynthesis protein MoaE compare
BWI76_RS19215 +1.1 1.5 proline-specific peptidase compare
BWI76_RS00475 +1.1 5.4 sulfurtransferase FdhD compare
BWI76_RS13515 +1.1 2.3 amino acid permease compare
BWI76_RS16880 +1.0 1.7 GlpE family protein compare
BWI76_RS20960 +1.0 4.3 ROK family protein compare
BWI76_RS02180 +1.0 1.1 hypothetical protein compare
BWI76_RS16455 +1.0 1.9 superoxide dismutase compare
BWI76_RS09195 +1.0 0.8 N-acetyltransferase compare
BWI76_RS12790 +1.0 1.0 lactate dehydrogenase compare
BWI76_RS27395 +1.0 4.3 hypothetical protein compare
BWI76_RS09420 +1.0 1.6 hypothetical protein compare
BWI76_RS03105 +1.0 1.0 myo-inosose-2 dehydratase compare
BWI76_RS04275 +1.0 4.6 molybdopterin adenylyltransferase compare
BWI76_RS19480 +1.0 3.4 transcriptional regulator compare
BWI76_RS19360 +1.0 2.2 glucose dehydrogenase compare
BWI76_RS15845 +1.0 1.0 hypothetical protein compare
BWI76_RS11345 +1.0 4.1 LysR family transcriptional regulator compare
BWI76_RS00330 +1.0 6.5 molybdenum cofactor guanylyltransferase compare
BWI76_RS24960 +0.9 2.8 N-acetyltransferase compare
BWI76_RS09085 +0.9 5.1 molybdopterin molybdenumtransferase MoeA compare
BWI76_RS03045 +0.9 1.5 hypothetical protein compare
BWI76_RS23050 +0.9 2.5 cobalt-precorrin-3B C(17)-methyltransferase compare
BWI76_RS15330 +0.9 3.7 urea ABC transporter permease subunit UrtC compare
BWI76_RS06190 +0.9 2.3 hypothetical protein compare
BWI76_RS14970 +0.9 1.3 pyrroline-5-carboxylate reductase compare
BWI76_RS11520 +0.9 1.0 hypothetical protein compare
BWI76_RS12825 +0.9 2.2 hypothetical protein compare
BWI76_RS17770 +0.9 1.4 isomerase/hydrolase compare
BWI76_RS13435 +0.9 1.0 hypothetical protein compare
BWI76_RS12485 +0.9 1.9 TyrR family transcriptional regulator compare
BWI76_RS03040 +0.9 2.2 leucyl aminopeptidase compare
BWI76_RS07955 +0.9 3.2 nucleoside diphosphate kinase regulator compare
BWI76_RS21485 +0.9 4.8 DUF4154 domain-containing protein compare
BWI76_RS11790 +0.9 2.0 acyl-CoA thioesterase compare
BWI76_RS06540 +0.9 2.1 DNA-binding protein HU-beta compare
BWI76_RS10755 +0.9 1.3 pyrimidine utilization flavin reductase protein F compare
BWI76_RS07780 +0.9 1.0 hypothetical protein compare
BWI76_RS16495 +0.9 1.7 endopeptidase compare
BWI76_RS11880 +0.9 2.7 23S rRNA pseudouridylate synthase B compare
BWI76_RS20800 +0.9 1.5 carboxysome shell protein compare
BWI76_RS08650 +0.9 1.4 molybdate ABC transporter permease compare
BWI76_RS01565 +0.9 1.7 NADH pyrophosphatase compare
BWI76_RS07730 +0.9 0.5 iron-enterobactin transporter membrane protein compare
BWI76_RS23185 +0.9 1.7 propanediol utilization: polyhedral bodies pduT compare
BWI76_RS24720 +0.9 1.5 hypothetical protein compare
BWI76_RS17375 +0.9 1.7 nitrate ABC transporter, permease protein compare
BWI76_RS09035 +0.8 3.3 protein tyrosine/serine phosphatase compare
BWI76_RS07165 +0.8 2.1 hypothetical protein compare
BWI76_RS04915 +0.8 2.6 hypothetical protein compare
BWI76_RS21275 +0.8 3.6 lytic transglycosylase F compare
BWI76_RS27735 +0.8 1.6 hypothetical protein compare
BWI76_RS18430 +0.8 1.1 hypothetical protein compare
BWI76_RS12875 +0.8 1.9 bifunctional deaminase-reductase compare
BWI76_RS17985 +0.8 3.0 hypothetical protein compare
BWI76_RS09520 +0.8 1.3 arginine ABC transporter ATP-binding protein ArtP compare
BWI76_RS25485 +0.8 1.4 septum formation protein Maf compare
BWI76_RS08215 +0.8 1.5 glucosamine-6-phosphate deaminase compare
BWI76_RS08390 +0.8 2.2 hypothetical protein compare
BWI76_RS05010 +0.8 2.3 tRNA glutamyl-Q synthetase compare
BWI76_RS00100 +0.8 2.2 hypothetical protein compare
BWI76_RS15050 +0.8 1.3 sugar transporter compare
BWI76_RS10035 +0.8 1.3 hypothetical protein compare
BWI76_RS18455 +0.8 0.7 tRNA-Ser compare
BWI76_RS18810 +0.8 1.4 nitrogenase iron protein compare
BWI76_RS12605 +0.8 2.9 hypothetical protein compare
BWI76_RS16210 +0.8 0.7 hypothetical protein compare
BWI76_RS24335 +0.8 3.6 two-component system response regulator QseB compare
BWI76_RS26960 +0.8 2.1 bifunctional glyoxylate/hydroxypyruvate reductase B compare
BWI76_RS04095 +0.8 1.3 dUMP phosphatase compare
BWI76_RS15435 +0.8 0.8 hypothetical protein compare
BWI76_RS19460 +0.8 1.1 lipoprotein compare
BWI76_RS07475 +0.8 1.2 DNA-binding transcriptional regulator RamA compare
BWI76_RS21390 +0.8 1.7 thiol disulfide reductase thioredoxin compare
BWI76_RS23065 +0.8 2.0 cobalt-precorrin-6Y C(15)-methyltransferase compare
BWI76_RS20765 +0.8 3.9 ethanolamine ammonia lyase large subunit compare
BWI76_RS24255 +0.8 3.2 thiol:disulfide oxidoreductase compare
BWI76_RS21945 +0.8 1.3 LysR family transcriptional regulator compare
BWI76_RS01940 +0.8 1.9 hypothetical protein compare
BWI76_RS11680 +0.8 2.1 succinylglutamate-semialdehyde dehydrogenase compare
BWI76_RS02625 +0.8 1.6 PTS ascorbate transporter subunit IIB compare
BWI76_RS16690 +0.7 2.1 peptide ABC transporter permease compare
BWI76_RS24540 +0.7 2.7 hypothetical protein compare
BWI76_RS20230 +0.7 0.8 hypothetical protein compare
BWI76_RS24035 +0.7 1.7 hypothetical protein compare
BWI76_RS14825 +0.7 1.0 dienelactone hydrolase family protein compare
BWI76_RS06325 +0.7 1.0 hypothetical protein compare
BWI76_RS06130 +0.7 1.7 extensin family protein compare
BWI76_RS10725 +0.7 2.2 hypothetical protein compare
BWI76_RS16745 +0.7 3.0 alpha-acetolactate decarboxylase compare
BWI76_RS01690 +0.7 2.1 membrane protein compare
BWI76_RS23900 +0.7 1.7 hypothetical protein compare
BWI76_RS01195 +0.7 1.0 membrane protein compare
BWI76_RS08380 +0.7 0.7 endonuclease VIII compare
BWI76_RS20560 +0.7 1.1 hypothetical protein compare
BWI76_RS10840 +0.7 3.7 membrane protein compare
BWI76_RS24660 +0.7 2.5 autoinducer 2 ABC transporter ATP-binding protein LsrA compare
BWI76_RS04560 +0.7 1.3 holo-ACP synthase CitX compare
BWI76_RS20375 +0.7 1.2 membrane protein compare
BWI76_RS13335 +0.7 2.4 peptidase T compare
BWI76_RS13680 +0.7 2.4 methyl viologen resistance protein SmvA compare
BWI76_RS09165 +0.7 1.8 phosphatase YbjI compare
BWI76_RS06080 +0.7 2.0 taurine dioxygenase compare
BWI76_RS03515 +0.7 1.7 hypothetical protein compare
BWI76_RS26245 +0.7 2.0 transcriptional regulator compare
BWI76_RS11775 +0.7 1.7 2-deoxy-D-gluconate 3-dehydrogenase compare
BWI76_RS19605 +0.7 1.7 CidB/LrgB family autolysis modulator compare
BWI76_RS10570 +0.7 2.7 cysteine ABC transporter substrate-binding protein compare
BWI76_RS13135 +0.7 1.9 3-oxoadipyl-CoA thiolase compare
BWI76_RS07280 +0.7 1.5 branched-chain amino acid ABC transporter permease compare
BWI76_RS23505 +0.7 4.5 ferrous iron transporter B compare
BWI76_RS02225 +0.7 2.0 phosphonate C-P lyase system protein PhnG compare
BWI76_RS03025 +0.7 2.1 N-acetyltransferase compare
BWI76_RS06665 +0.7 2.6 membrane protein compare
BWI76_RS05895 +0.7 2.4 phosphonate ABC transporter, permease protein PhnE compare
BWI76_RS22000 +0.7 2.8 hypothetical protein compare
BWI76_RS18600 +0.7 2.2 HupC/HyaC/HydC family protein compare
BWI76_RS24110 +0.7 0.8 YggU family protein compare
BWI76_RS13840 +0.7 2.5 MBL fold metallo-hydrolase compare
BWI76_RS23005 +0.7 1.5 bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase compare
BWI76_RS08820 +0.7 2.4 molybdenum cofactor biosynthesis protein compare
BWI76_RS22860 +0.7 2.3 SecY-interacting protein compare
BWI76_RS14610 +0.7 1.6 putative hydrolase compare
BWI76_RS16805 +0.7 1.6 basic amino acid ABC transporter substrate-binding protein compare
BWI76_RS00335 +0.7 1.8 hypothetical protein compare
BWI76_RS00290 +0.7 3.3 Ribokinase (EC 2.7.1.15) (from data) compare
BWI76_RS13220 +0.7 2.2 N-acetyltransferase compare
BWI76_RS04895 +0.7 1.1 hypothetical protein compare
BWI76_RS24070 +0.7 1.6 16S rRNA (uracil(1498)-N(3))-methyltransferase compare
BWI76_RS11435 +0.7 1.0 hypothetical protein compare
BWI76_RS06505 +0.7 1.7 hypothetical protein compare
BWI76_RS12620 +0.7 1.3 2-nitropropane dioxygenase compare
BWI76_RS20760 +0.6 1.4 ethanolamine ammonia-lyase small subunit compare
BWI76_RS13325 +0.6 1.4 dicarboxylate transporter/tellurite-resistance protein TehA compare
BWI76_RS06375 +0.6 1.2 oxidoreductase compare
BWI76_RS17345 +0.6 2.4 nitrate/nitrite two-component system sensor histidine kinase NarX compare
BWI76_RS08450 +0.6 1.7 fumarate hydratase compare
BWI76_RS05995 +0.6 2.8 branched-chain amino acid ABC transporter substrate-binding protein compare
BWI76_RS07985 +0.6 0.6 fluoride ion transporter CrcB compare
BWI76_RS18225 +0.6 1.1 universal stress protein C compare
BWI76_RS04805 +0.6 2.0 8-oxo-dGTP diphosphatase compare
BWI76_RS04210 +0.6 2.0 hypothetical protein compare
BWI76_RS15900 +0.6 1.9 hypothetical protein compare
BWI76_RS11950 +0.6 2.1 phosphatidylglycerophosphatase B compare
BWI76_RS16330 +0.6 0.8 oxidoreductase compare
BWI76_RS22200 +0.6 2.4 iron ABC transporter compare
BWI76_RS11465 +0.6 1.2 hypothetical protein compare
BWI76_RS08615 +0.6 3.2 galactokinase compare
BWI76_RS00825 +0.6 3.6 AraC family transcriptional regulator compare
BWI76_RS06880 +0.6 1.8 biopolymer transport protein ExbD/TolR compare
BWI76_RS15135 +0.6 2.4 hypothetical protein compare
BWI76_RS15290 +0.6 0.7 transcriptional regulator compare
BWI76_RS02720 +0.6 3.4 NAD(P)-dependent oxidoreductase compare
BWI76_RS20410 +0.6 2.1 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC compare
BWI76_RS26805 +0.6 1.5 cellulose biosynthesis protein BcsF compare
BWI76_RS25865 +0.6 2.2 ferredoxin compare
BWI76_RS14075 +0.6 0.6 TetR family transcriptional regulator compare
BWI76_RS04205 +0.6 2.9 right oriC-binding transcriptional activator compare
BWI76_RS19540 +0.6 2.2 multidrug transporter permease compare
BWI76_RS06025 +0.6 3.9 amino acid transporter compare
BWI76_RS13445 +0.6 0.8 alpha/beta hydrolase compare
BWI76_RS01355 +0.6 4.0 hypothetical protein compare
BWI76_RS15980 +0.6 1.3 lysine transporter LysE compare
BWI76_RS02820 +0.6 1.9 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase compare
BWI76_RS04875 +0.6 3.4 transcriptional regulator PdhR compare
BWI76_RS04900 +0.6 1.3 DUF2950 domain-containing protein compare


Specific Phenotypes

For 2 genes in this experiment

For mixed community Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL in Klebsiella michiganensis M5al

For mixed community Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL across organisms