Experiment set14IT051 for Klebsiella michiganensis M5al

Compare to:

Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL

200 most important genes:

  gene name fitness t score description  
BWI76_RS18950 -7.2 -4.5 imidazole glycerol phosphate synthase cyclase subunit compare
BWI76_RS18935 -6.3 -8.7 bifunctional imidazole glycerol-phosphate dehydratase/histidinol phosphatase compare
BWI76_RS18925 -6.1 -8.3 histidinol dehydrogenase compare
BWI76_RS23365 -6.0 -3.6 LysR family transcriptional regulator compare
BWI76_RS25700 -5.9 -5.8 heavy metal-responsive transcriptional regulator compare
BWI76_RS18930 -5.7 -5.8 histidinol-phosphate transaminase compare
BWI76_RS04250 -5.7 -7.8 homoserine kinase compare
BWI76_RS27385 -5.7 -6.7 orotate phosphoribosyltransferase compare
BWI76_RS04470 -5.6 -7.7 carbamoyl phosphate synthase large subunit compare
BWI76_RS18920 -5.6 -3.7 ATP phosphoribosyltransferase compare
BWI76_RS20965 -5.4 -4.4 phosphoribosylformylglycinamidine cyclo-ligase compare
BWI76_RS00845 -5.4 -10.3 N-acetyl-gamma-glutamyl-phosphate reductase compare
BWI76_RS07065 -5.2 -9.9 5-(carboxyamino)imidazole ribonucleotide synthase compare
BWI76_RS01615 -5.2 -9.4 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase compare
BWI76_RS20350 -5.2 -9.6 amidophosphoribosyltransferase compare
BWI76_RS08385 -5.1 -2.7 citrate (Si)-synthase compare
BWI76_RS26425 -5.1 -9.7 zinc/cadmium/mercury/lead-transporting ATPase compare
BWI76_RS20355 -5.1 -4.5 colicin V production protein compare
BWI76_RS18940 -5.0 -5.0 imidazole glycerol phosphate synthase subunit HisH compare
BWI76_RS21265 -5.0 -14.8 phosphoribosylformylglycinamidine synthase compare
BWI76_RS00850 -5.0 -9.0 acetylglutamate kinase compare
BWI76_RS01115 -5.0 -2.8 dTDP-4-amino-4,6-dideoxygalactose transaminase compare
BWI76_RS21165 -4.9 -1.7 Fe-S cluster assembly transcriptional regulator IscR compare
BWI76_RS18955 -4.9 -5.4 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase compare
BWI76_RS11965 -4.9 -6.0 orotidine-5'-phosphate decarboxylase compare
BWI76_RS26460 -4.9 -3.4 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
BWI76_RS11840 -4.9 -5.4 tryptophan synthase subunit alpha compare
BWI76_RS00855 -4.9 -10.3 argininosuccinate lyase compare
BWI76_RS26455 -4.8 -2.2 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase compare
BWI76_RS25115 -4.8 -8.9 argininosuccinate synthase compare
BWI76_RS22755 -4.7 -3.3 phosphoadenosine phosphosulfate reductase compare
BWI76_RS20895 -4.6 -5.4 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
BWI76_RS00875 -4.5 -4.4 DNA-binding transcriptional regulator FabR compare
BWI76_RS04245 -4.5 -16.5 bifunctional aspartate kinase/homoserine dehydrogenase I compare
BWI76_RS04255 -4.4 -8.6 threonine synthase compare
BWI76_RS23220 -4.4 -9.4 amino-acid N-acetyltransferase compare
BWI76_RS08520 -4.3 -2.4 colicin transporter TolQ compare
BWI76_RS07070 -4.3 -5.8 5-(carboxyamino)imidazole ribonucleotide mutase compare
BWI76_RS00835 -4.3 -14.8 phosphoenolpyruvate carboxylase compare
BWI76_RS04465 -4.3 -6.3 carbamoyl-phosphate synthase small subunit compare
BWI76_RS08580 -4.2 -4.2 quinolinate synthetase compare
BWI76_RS00805 -4.2 -5.6 5,10-methylenetetrahydrofolate reductase compare
BWI76_RS05840 -4.1 -2.8 glutamate 5-kinase compare
BWI76_RS02995 -4.1 -9.1 aspartate carbamoyltransferase compare
BWI76_RS09910 -4.1 -15.5 dihydroorotate dehydrogenase (quinone) compare
BWI76_RS00975 -4.1 -11.3 dihydroxy-acid dehydratase compare
BWI76_RS04665 -4.0 -19.9 3-isopropylmalate dehydratase small subunit compare
BWI76_RS09760 -4.0 -2.8 3-phosphoshikimate 1-carboxyvinyltransferase compare
BWI76_RS04525 -4.0 -2.2 4-hydroxythreonine-4-phosphate dehydrogenase PdxA compare
BWI76_RS01610 -4.0 -5.9 phosphoribosylamine--glycine ligase compare
BWI76_RS04685 -4.0 -13.8 putative leucine operon leader peptide compare
BWI76_RS04160 -3.9 -2.7 phosphoserine phosphatase compare
BWI76_RS27390 -3.9 -5.6 ribonuclease PH compare
BWI76_RS00990 -3.8 -14.0 ketol-acid reductoisomerase compare
BWI76_RS05015 -3.8 -2.5 transcriptional regulator compare
BWI76_RS21070 -3.8 -2.1 outer membrane protein assembly factor BamB compare
BWI76_RS23265 -3.7 -2.5 hypothetical protein compare
BWI76_RS04675 -3.7 -9.0 3-isopropylmalate dehydrogenase compare
BWI76_RS11860 -3.7 -9.7 anthranilate synthase component I compare
BWI76_RS03010 -3.7 -7.5 ornithine carbamoyltransferase compare
BWI76_RS04670 -3.7 -12.7 3-isopropylmalate dehydratase large subunit compare
BWI76_RS11845 -3.7 -1.7 tryptophan synthase subunit beta compare
BWI76_RS10990 -3.6 -3.4 dihydroorotase compare
BWI76_RS08530 -3.6 -1.7 protein TolA compare
BWI76_RS20390 -3.5 -4.3 erythronate-4-phosphate dehydrogenase compare
BWI76_RS01275 -3.5 -10.2 LysR family transcriptional regulator compare
BWI76_RS16965 -3.5 -2.8 murein lipoprotein compare
BWI76_RS11855 -3.5 -7.7 bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase compare
BWI76_RS21350 -3.5 -4.4 anti-RNA polymerase sigma factor SigE compare
BWI76_RS21465 -3.5 -5.6 bifunctional chorismate mutase/prephenate dehydratase compare
BWI76_RS05260 -3.4 -1.6 chaperone compare
BWI76_RS05835 -3.4 -2.3 gamma-glutamyl-phosphate reductase compare
BWI76_RS11850 -3.4 -10.2 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase compare
BWI76_RS24285 -3.4 -12.1 cystathionine beta-lyase compare
BWI76_RS24340 -3.4 -8.1 two-component sensor histidine kinase compare
BWI76_RS25645 -3.4 -6.0 shikimate dehydrogenase compare
BWI76_RS23920 -3.4 -2.3 D-3-phosphoglycerate dehydrogenase compare
BWI76_RS26000 -3.3 -9.9 aspartate aminotransferase family protein compare
BWI76_RS20360 -3.3 -1.1 cell division protein DedD compare
BWI76_RS01655 -3.3 -7.9 homoserine O-succinyltransferase compare
BWI76_RS00980 -3.3 -13.3 PLP-dependent threonine dehydratase compare
BWI76_RS08525 -3.2 -1.6 colicin transporter compare
BWI76_RS04680 -3.2 -9.9 2-isopropylmalate synthase compare
BWI76_RS21075 -3.2 -1.7 membrane protein compare
BWI76_RS00965 -3.1 -1.0 acetolactate synthase 2 small subunit compare
BWI76_RS06680 -3.1 -1.4 hypothetical protein compare
BWI76_RS21475 -3.1 -2.7 bifunctional chorismate mutase/prephenate dehydrogenase compare
BWI76_RS09755 -3.1 -2.1 phosphoserine transaminase compare
BWI76_RS00785 -3.0 -6.5 cystathionine gamma-synthase compare
BWI76_RS04240 -3.0 -2.2 thr operon leader peptide compare
BWI76_RS06535 -3.0 -2.0 endopeptidase La compare
BWI76_RS04645 -3.0 -2.9 3-dehydroquinase compare
BWI76_RS01800 -3.0 -2.0 glucose-6-phosphate isomerase compare
BWI76_RS21345 -2.9 -2.2 sigma-E factor regulatory protein RseB compare
BWI76_RS04845 -2.9 -6.7 nicotinate-nucleotide pyrophosphorylase compare
BWI76_RS21580 -2.9 -1.6 SsrA-binding protein compare
BWI76_RS26665 -2.9 -4.1 DNA-binding response regulator compare
BWI76_RS24595 -2.8 -4.2 dihydroxyacetone kinase subunit DhaK compare
BWI76_RS08210 -2.8 -1.3 N-acetylglucosamine-6-phosphate deacetylase compare
BWI76_RS01110 -2.7 -7.0 TDP-fucosamine acetyltransferase compare
BWI76_RS22765 -2.7 -7.9 sulfite reductase subunit alpha compare
BWI76_RS14300 -2.7 -2.8 hypothetical protein compare
BWI76_RS25335 -2.7 -2.1 stringent starvation protein A compare
BWI76_RS20380 -2.7 -0.9 tRNA pseudouridine(38-40) synthase TruA compare
BWI76_RS16425 -2.7 -3.9 hypothetical protein compare
BWI76_RS22690 -2.6 -3.4 adenylyl-sulfate kinase compare
BWI76_RS06525 -2.6 -5.9 ATP-dependent Clp protease proteolytic subunit compare
BWI76_RS01095 -2.6 -2.5 UDP-N-acetyl-D-mannosamine dehydrogenase compare
BWI76_RS15825 -2.6 -1.1 hypothetical protein compare
BWI76_RS01125 -2.6 -5.4 4-alpha-L-fucosyltransferase compare
BWI76_RS00240 -2.5 -1.6 FMN-binding protein MioC compare
BWI76_RS21450 -2.5 -1.9 23S rRNA pseudouridine(1911/1915/1917) synthase compare
BWI76_RS12070 -2.5 -1.1 hypothetical protein compare
BWI76_RS22760 -2.5 -4.6 sulfite reductase subunit beta compare
BWI76_RS17975 -2.5 -5.0 tail-specific protease compare
BWI76_RS19905 -2.4 -4.6 OmpK36 porin compare
BWI76_RS01630 -2.4 -1.4 16S ribosomal RNA compare
BWI76_RS25280 -2.4 -1.4 RNase adaptor protein RapZ compare
BWI76_RS09640 -2.4 -2.2 cysteine/glutathione ABC transporter permease/ATP-binding protein CydD compare
BWI76_RS21235 -2.4 -1.1 hypothetical protein compare
BWI76_RS21360 -2.3 -10.5 L-aspartate oxidase compare
BWI76_RS21310 -2.3 -1.5 DNA repair protein RecO compare
BWI76_RS11300 -2.3 -1.0 cupin compare
BWI76_RS16355 -2.3 -2.9 electron transport complex subunit A compare
BWI76_RS11610 -2.3 -2.5 glutamate dehydrogenase compare
BWI76_RS19010 -2.3 -2.6 polysaccharide pyruvyl transferase yvff compare
BWI76_RS23360 -2.2 -1.3 diaminopimelate decarboxylase compare
BWI76_RS26395 -2.2 -5.7 cell division protein FtsE compare
BWI76_RS24605 -2.2 -5.1 dihydroxyacetone kinase subunit DhaM compare
BWI76_RS02530 -2.2 -1.5 tRNA dimethylallyltransferase compare
BWI76_RS01900 -2.2 -6.2 tRNA-dihydrouridine synthase A compare
BWI76_RS20440 -2.1 -2.3 50S ribosomal protein L3 N(5)-glutamine methyltransferase compare
BWI76_RS10305 -2.1 -7.9 transposase compare
BWI76_RS27450 -2.1 -7.5 ferredoxin--NADP(+) reductase compare
BWI76_RS01080 -2.1 -7.3 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase compare
BWI76_RS09655 -2.1 -4.5 leucine-responsive regulatory protein compare
BWI76_RS19840 -2.0 -0.6 hypothetical protein compare
BWI76_RS26390 -2.0 -6.1 cell division protein FtsX compare
BWI76_RS09190 -2.0 -1.3 hypothetical protein compare
BWI76_RS00755 -2.0 -2.4 ATP-dependent protease subunit HslV compare
BWI76_RS25060 -2.0 -6.8 lipoprotein NlpI compare
BWI76_RS00180 -2.0 -0.9 F0F1 ATP synthase subunit epsilon compare
BWI76_RS23985 -2.0 -6.7 erythrose-4-phosphate dehydrogenase compare
BWI76_RS09615 -2.0 -1.9 ATP-dependent Clp protease ATP-binding subunit ClpA compare
BWI76_RS22805 -2.0 -8.9 GTP diphosphokinase compare
BWI76_RS01090 -2.0 -6.7 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) compare
BWI76_RS13560 -1.9 -0.9 amino acid ABC transporter substrate-binding subunit compare
BWI76_RS25300 -1.9 -3.4 hybrid sensor histidine kinase/response regulator compare
BWI76_RS09335 -1.9 -1.2 baseplate assembly protein W compare
BWI76_RS17980 -1.9 -2.3 RNA chaperone ProQ compare
BWI76_RS10935 -1.9 -4.7 glucan biosynthesis glucosyltransferase H compare
BWI76_RS00960 -1.9 -3.9 acetolactate synthase 2 catalytic subunit compare
BWI76_RS19460 -1.9 -1.8 lipoprotein compare
BWI76_RS14305 -1.8 -4.3 metallophosphoesterase compare
BWI76_RS09970 -1.8 -1.0 porin OmpA compare
BWI76_RS16375 -1.8 -2.0 electron transport complex subunit G compare
BWI76_RS25070 -1.8 -1.5 hypothetical protein compare
BWI76_RS01135 -1.8 -4.2 lipopolysaccharide N-acetylmannosaminouronosyltransferase compare
BWI76_RS25960 -1.8 -3.7 NUDIX hydrolase compare
BWI76_RS24900 -1.8 -1.1 DeoR family transcriptional regulator compare
BWI76_RS00345 -1.8 -3.7 protein disulfide oxidoreductase DsbA compare
BWI76_RS06635 -1.7 -2.9 methylated-DNA--protein-cysteine methyltransferase compare
BWI76_RS15660 -1.7 -1.9 hypothetical protein compare
BWI76_RS25920 -1.7 -1.6 peptidylprolyl isomerase compare
BWI76_RS20750 -1.7 -0.8 carboxysome structural protein EutK compare
BWI76_RS26730 -1.7 -7.2 inner membrane protein YhjD compare
BWI76_RS11190 -1.7 -2.4 putative TetR/AcrR family transcriptional regulatory protein compare
BWI76_RS26150 -1.7 -2.1 molecular chaperone Hsp33 compare
BWI76_RS08605 -1.7 -1.8 phosphoglyceromutase compare
BWI76_RS08495 -1.7 -3.7 cytochrome bd-I ubiquinol oxidase subunit I compare
BWI76_RS24600 -1.7 -2.6 dihydroxyacetone kinase compare
BWI76_RS00720 -1.7 -2.1 DNA-binding response regulator compare
BWI76_RS09625 -1.6 -1.0 hypothetical protein compare
BWI76_RS01870 -1.6 -4.5 diacylglycerol kinase compare
BWI76_RS24400 -1.6 -2.6 outer membrane channel protein TolC compare
BWI76_RS17805 -1.6 -1.0 membrane protein compare
BWI76_RS07465 -1.6 -1.4 TetR family transcriptional regulator compare
BWI76_RS26670 -1.6 -7.6 two-component sensor histidine kinase compare
BWI76_RS00715 -1.5 -1.0 two-component sensor histidine kinase compare
BWI76_RS02775 -1.5 -5.0 outer membrane protein assembly factor compare
BWI76_RS21370 -1.5 -1.2 ATP-dependent RNA helicase SrmB compare
BWI76_RS09670 -1.5 -2.2 recombination factor protein RarA compare
BWI76_RS15350 -1.5 -0.9 hypothetical protein compare
BWI76_RS06530 -1.5 -4.9 ATP-dependent Clp protease ATP-binding subunit ClpX compare
BWI76_RS05450 -1.5 -0.6 ribonuclease HI compare
BWI76_RS15965 -1.5 -3.7 MFS transporter compare
BWI76_RS13820 -1.5 -1.4 hypothetical protein compare
BWI76_RS15635 -1.5 -2.5 hypothetical protein compare
BWI76_RS08500 -1.5 -2.1 cytochrome d ubiquinol oxidase subunit 2 compare
BWI76_RS12450 -1.5 -2.1 phage shock protein PspA compare
BWI76_RS15110 -1.5 -3.0 putative excinuclease ABC subunit A compare
BWI76_RS15115 -1.4 -1.0 MFS transporter compare
BWI76_RS15690 -1.4 -2.8 hypothetical protein compare
BWI76_RS02735 -1.4 -1.7 3'(2'),5'-bisphosphate nucleotidase CysQ compare
BWI76_RS00355 -1.4 -1.1 DNA polymerase I compare
BWI76_RS12145 -1.4 -1.7 hypothetical protein compare
BWI76_RS00400 -1.4 -0.7 glutamine synthetase compare
BWI76_RS14005 -1.4 -1.3 TetR family transcriptional regulator compare
BWI76_RS20640 -1.4 -2.7 cysteine synthase A compare
BWI76_RS09645 -1.4 -0.6 thioredoxin-disulfide reductase compare


Specific Phenotypes

For 6 genes in this experiment

For mixed community Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL in Klebsiella michiganensis M5al

For mixed community Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL across organisms