Experiment set14IT051 for Klebsiella michiganensis M5al

Compare to:

Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL

200 most detrimental genes:

  gene name fitness t score description  
BWI76_RS08120 +2.7 14.0 cobalt transporter compare
BWI76_RS21540 +2.3 11.1 membrane protein compare
BWI76_RS01225 +2.2 13.5 magnesium transporter CorA compare
BWI76_RS00140 +2.2 4.0 phosphate transport system regulator PhoU compare
BWI76_RS06440 +1.8 5.9 AP endonuclease compare
BWI76_RS00025 +1.6 2.1 hypothetical protein compare
BWI76_RS26405 +1.4 3.1 16S rRNA (guanine(966)-N(2))-methyltransferase compare
BWI76_RS23895 +1.4 1.6 Xaa-Pro aminopeptidase compare
BWI76_RS20995 +1.3 8.1 RNA degradosome polyphosphate kinase compare
BWI76_RS23355 +1.3 1.9 LacI family transcriptional regulator compare
BWI76_RS21675 +1.3 1.2 hypothetical protein compare
BWI76_RS14775 +1.2 2.8 creatinine amidohydrolase compare
BWI76_RS20155 +1.2 1.3 NADH-quinone oxidoreductase subunit I compare
BWI76_RS07730 +1.1 0.8 iron-enterobactin transporter membrane protein compare
BWI76_RS19310 +1.1 3.2 ABC transporter permease compare
BWI76_RS07805 +1.1 1.4 sugar ABC transporter permease compare
BWI76_RS15940 +1.1 2.3 DMSO reductase maturation protein DsmD compare
BWI76_RS12485 +1.1 0.9 TyrR family transcriptional regulator compare
BWI76_RS01585 +1.0 3.6 transcriptional regulator compare
BWI76_RS03815 +1.0 1.3 hypothetical protein compare
BWI76_RS23320 +1.0 1.7 hypothetical protein compare
BWI76_RS03045 +1.0 1.9 hypothetical protein compare
BWI76_RS01195 +1.0 1.6 membrane protein compare
BWI76_RS15215 +1.0 0.9 N-acetyltransferase compare
BWI76_RS19880 +1.0 3.8 magnesium transporter compare
BWI76_RS07165 +1.0 3.1 hypothetical protein compare
BWI76_RS18390 +1.0 2.3 hypothetical protein compare
BWI76_RS08765 +0.9 1.8 8-amino-7-oxononanoate synthase compare
BWI76_RS15260 +0.9 1.2 hypothetical protein compare
BWI76_RS23250 +0.9 1.2 hypothetical protein compare
BWI76_RS20795 +0.9 1.4 ethanolamine catabolic microcompartment shell protein EutN compare
BWI76_RS01650 +0.9 1.4 acetyltransferase compare
BWI76_RS14415 +0.9 1.4 transcriptional regulator, TetR family protein compare
BWI76_RS14670 +0.9 1.7 hypothetical protein compare
BWI76_RS05235 +0.9 0.9 hypothetical protein compare
BWI76_RS11755 +0.9 2.7 catalase HPII compare
BWI76_RS11900 +0.9 0.9 cob(I)yrinic acid a,c-diamide adenosyltransferase compare
BWI76_RS00885 +0.9 2.8 tRNA (uridine(54)-C5)-methyltransferase TrmA compare
BWI76_RS19360 +0.8 2.0 glucose dehydrogenase compare
BWI76_RS14575 +0.8 1.4 TENA/THI-4 family protein compare
BWI76_RS23050 +0.8 2.4 cobalt-precorrin-3B C(17)-methyltransferase compare
BWI76_RS20765 +0.8 2.8 ethanolamine ammonia lyase large subunit compare
BWI76_RS09565 +0.8 3.7 hybrid-cluster NAD(P)-dependent oxidoreductase compare
BWI76_RS17400 +0.8 1.1 transporter compare
BWI76_RS12735 +0.8 2.6 phage repressor protein compare
BWI76_RS14805 +0.8 1.1 hypothetical protein compare
BWI76_RS13215 +0.8 1.4 type I glyceraldehyde-3-phosphate dehydrogenase compare
BWI76_RS11435 +0.8 1.6 hypothetical protein compare
BWI76_RS06080 +0.8 2.8 taurine dioxygenase compare
BWI76_RS11040 +0.8 2.3 ribonuclease E compare
BWI76_RS26890 +0.8 1.5 hypothetical protein compare
BWI76_RS20220 +0.8 2.9 sugar phosphatase compare
BWI76_RS08380 +0.8 0.9 endonuclease VIII compare
BWI76_RS08835 +0.8 2.2 molybdopterin guanine dinucleotide biosynthesis protein MoaE compare
BWI76_RS07725 +0.8 1.0 iron-enterobactin transporter permease compare
BWI76_RS16055 +0.8 4.0 malonate decarboxylase subunit epsilon compare
BWI76_RS23190 +0.8 1.9 propanediol utilization protein PduU compare
BWI76_RS27605 +0.8 2.6 hypothetical protein compare
BWI76_RS05570 +0.8 0.8 hypothetical protein compare
BWI76_RS20145 +0.8 1.2 NADH-quinone oxidoreductase subunit K compare
BWI76_RS16760 +0.8 2.9 lipase compare
BWI76_RS13685 +0.8 1.2 IclR family transcriptional regulator compare
BWI76_RS12825 +0.8 2.1 hypothetical protein compare
BWI76_RS15270 +0.8 3.2 phenazine biosynthesis protein PhzF family compare
BWI76_RS15775 +0.8 1.7 replication protein compare
BWI76_RS07760 +0.8 3.6 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase compare
BWI76_RS03040 +0.8 2.0 leucyl aminopeptidase compare
BWI76_RS11710 +0.8 3.4 nucleotide excision repair endonuclease compare
BWI76_RS23885 +0.8 0.8 2-octaprenylphenol hydroxylase compare
BWI76_RS23690 +0.7 1.5 putative glyoxalase/bleomycin resistance protein/dioxygenase compare
BWI76_RS04895 +0.7 2.1 hypothetical protein compare
BWI76_RS23030 +0.7 1.8 cobalamin biosynthesis protein CbiM compare
BWI76_RS16805 +0.7 2.0 basic amino acid ABC transporter substrate-binding protein compare
BWI76_RS11675 +0.7 1.8 arginine N-succinyltransferase compare
BWI76_RS14540 +0.7 1.4 yersiniabactin biosynthetic protein YbtU compare
BWI76_RS15300 +0.7 2.4 multiple antibiotic resistance regulatory periplasmic protein MarB compare
BWI76_RS13055 +0.7 0.9 NmrA family protein compare
BWI76_RS18130 +0.7 3.0 zinc ABC transporter substrate-binding protein compare
BWI76_RS25545 +0.7 2.4 hypothetical protein compare
BWI76_RS16645 +0.7 1.9 DeoR family transcriptional regulator compare
BWI76_RS12575 +0.7 3.0 FAD-dependent oxidoreductase compare
BWI76_RS17155 +0.7 1.6 hypothetical protein compare
BWI76_RS11430 +0.7 0.7 lipoprotein compare
BWI76_RS11780 +0.7 2.0 2-deoxyglucose-6-phosphatase compare
BWI76_RS07470 +0.7 1.7 MBL fold metallo-hydrolase compare
BWI76_RS16485 +0.7 0.8 ribonuclease T compare
BWI76_RS19375 +0.7 1.0 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase compare
BWI76_RS05525 +0.7 2.0 glycerophosphodiester phosphodiesterase compare
BWI76_RS19220 +0.7 1.7 hypothetical protein compare
BWI76_RS19870 +0.7 1.2 malate:quinone oxidoreductase compare
BWI76_RS10725 +0.7 2.1 hypothetical protein compare
BWI76_RS18360 +0.7 1.5 aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase family protein compare
BWI76_RS24960 +0.7 1.7 N-acetyltransferase compare
BWI76_RS06330 +0.7 2.2 DNA-binding transcriptional regulator compare
BWI76_RS14925 +0.7 3.0 ABC transporter substrate-binding protein compare
BWI76_RS17085 +0.7 2.2 hypothetical protein compare
BWI76_RS16915 +0.7 2.2 alpha/beta hydrolase fold protein compare
BWI76_RS01565 +0.7 1.5 NADH pyrophosphatase compare
BWI76_RS21945 +0.7 1.9 LysR family transcriptional regulator compare
BWI76_RS04805 +0.7 2.4 8-oxo-dGTP diphosphatase compare
BWI76_RS03025 +0.7 1.0 N-acetyltransferase compare
BWI76_RS11815 +0.7 0.9 hypothetical protein compare
BWI76_RS08650 +0.7 1.6 molybdate ABC transporter permease compare
BWI76_RS00330 +0.7 3.3 molybdenum cofactor guanylyltransferase compare
BWI76_RS19465 +0.7 1.7 hypothetical protein compare
BWI76_RS08280 +0.7 2.0 acyl-CoA esterase compare
BWI76_RS19480 +0.7 2.7 transcriptional regulator compare
BWI76_RS18455 +0.7 0.6 tRNA-Ser compare
BWI76_RS04275 +0.7 3.8 molybdopterin adenylyltransferase compare
BWI76_RS08330 +0.7 0.9 hypothetical protein compare
BWI76_RS02695 +0.6 2.8 peptidyl-prolyl cis-trans isomerase compare
BWI76_RS06025 +0.6 3.6 amino acid transporter compare
BWI76_RS24785 +0.6 2.3 DUF805 domain-containing protein compare
BWI76_RS06735 +0.6 1.4 50S ribosomal protein L31 compare
BWI76_RS07855 +0.6 1.2 PucR family transcriptional regulator compare
BWI76_RS12780 +0.6 1.6 hypothetical protein compare
BWI76_RS22125 +0.6 1.4 membrane protein compare
BWI76_RS16655 +0.6 2.3 CatA-like O-acetyltransferase compare
BWI76_RS17230 +0.6 1.7 peptide ABC transporter permease compare
BWI76_RS23195 +0.6 1.9 ethanolamine utilization protein EutP compare
BWI76_RS16880 +0.6 2.2 GlpE family protein compare
BWI76_RS04875 +0.6 4.0 transcriptional regulator PdhR compare
BWI76_RS23255 +0.6 3.2 prepilin-type cleavage/methylation domain-containing protein compare
BWI76_RS10500 +0.6 1.5 flavoprotein monooxygenase compare
BWI76_RS06015 +0.6 1.1 hypothetical protein compare
BWI76_RS16740 +0.6 1.6 transcriptional regulator compare
BWI76_RS00290 +0.6 3.6 Ribokinase (EC 2.7.1.15) (from data) compare
BWI76_RS23595 +0.6 2.3 N-acetyltransferase compare
BWI76_RS16510 +0.6 2.3 transcriptional repressor PurR compare
BWI76_RS13445 +0.6 0.9 alpha/beta hydrolase compare
BWI76_RS27820 +0.6 0.8 ilvB operon leader peptide IvbL compare
BWI76_RS15090 +0.6 2.1 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase compare
BWI76_RS14780 +0.6 1.8 phosphotriesterase compare
BWI76_RS13805 +0.6 2.3 inorganic diphosphatase compare
BWI76_RS20960 +0.6 2.1 ROK family protein compare
BWI76_RS00475 +0.6 3.7 sulfurtransferase FdhD compare
BWI76_RS06880 +0.6 2.1 biopolymer transport protein ExbD/TolR compare
BWI76_RS19275 +0.6 1.6 DNA-binding response regulator compare
BWI76_RS14050 +0.6 1.2 AP endonuclease, family 2 compare
BWI76_RS06980 +0.6 2.0 ureidoglycolate lyase compare
BWI76_RS13625 +0.6 1.4 hypothetical protein compare
BWI76_RS19440 +0.6 1.4 putative transporter subunit compare
BWI76_RS24810 +0.6 2.3 hypothetical protein compare
BWI76_RS21485 +0.6 3.1 DUF4154 domain-containing protein compare
BWI76_RS22190 +0.6 2.1 hypothetical protein compare
BWI76_RS15890 +0.6 2.1 Zn-dependent oxidoreductase compare
BWI76_RS10840 +0.6 2.8 membrane protein compare
BWI76_RS26805 +0.6 1.6 cellulose biosynthesis protein BcsF compare
BWI76_RS16685 +0.6 2.0 peptide ABC transporter permease compare
BWI76_RS04700 +0.6 1.1 acetolactate synthase small subunit compare
BWI76_RS22840 +0.6 1.1 transposase compare
BWI76_RS16745 +0.6 2.3 alpha-acetolactate decarboxylase compare
BWI76_RS23710 +0.6 2.3 3-keto-2-deoxy-D-ribonyl-CoA thiolase (from data) compare
BWI76_RS15985 +0.6 2.2 LysR family transcriptional regulator compare
BWI76_RS21685 +0.6 0.6 hypothetical protein compare
BWI76_RS16200 +0.6 0.7 NAD(P) transhydrogenase subunit beta compare
BWI76_RS01350 +0.6 0.4 NAD(P)H-flavin reductase compare
BWI76_RS27835 +0.6 1.9 acyltransferase compare
BWI76_RS07895 +0.6 1.5 sugar ABC transporter ATPase compare
BWI76_RS24055 +0.6 2.1 MFS transporter compare
BWI76_RS14410 +0.6 1.5 hypothetical protein compare
BWI76_RS09230 +0.6 2.0 hypothetical protein compare
BWI76_RS11240 +0.6 2.6 spermidine/putrescine ABC transporter substrate-binding protein PotD compare
BWI76_RS12625 +0.6 2.2 isoflavone reductase compare
BWI76_RS07835 +0.6 1.4 MFS transporter compare
BWI76_RS16160 +0.6 1.2 LysR family transcriptional regulator compare
BWI76_RS17420 +0.6 1.5 hypothetical protein compare
BWI76_RS03605 +0.6 1.1 BMC domain-containing protein compare
BWI76_RS01840 +0.6 2.1 maltose ABC transporter, ATPase component (MalK) (from data) compare
BWI76_RS01620 +0.6 2.2 hypothetical protein compare
BWI76_RS01285 +0.6 2.5 amino acid ABC transporter substrate-binding protein compare
BWI76_RS24035 +0.6 1.9 hypothetical protein compare
BWI76_RS23140 +0.6 1.0 carboxysome shell protein compare
BWI76_RS16695 +0.6 2.0 dipeptide/oligopeptide/nickel ABC transporter ATP-binding protein compare
BWI76_RS16660 +0.6 2.2 SfnB family sulfur acquisition oxidoreductase compare
BWI76_RS21535 +0.6 1.8 inner membrane protein YpjD compare
BWI76_RS11790 +0.6 1.3 acyl-CoA thioesterase compare
BWI76_RS11680 +0.6 2.1 succinylglutamate-semialdehyde dehydrogenase compare
BWI76_RS02225 +0.6 1.8 phosphonate C-P lyase system protein PhnG compare
BWI76_RS16460 +0.6 2.3 oxidoreductase compare
BWI76_RS21980 +0.6 1.2 hypothetical protein compare
BWI76_RS03920 +0.6 1.4 N-acetyltransferase compare
BWI76_RS09085 +0.6 1.7 molybdopterin molybdenumtransferase MoeA compare
BWI76_RS09300 +0.6 1.7 phage lysozyme compare
BWI76_RS04970 +0.6 1.3 ABC transporter permease compare
BWI76_RS06280 +0.5 2.1 hypothetical protein compare
BWI76_RS20045 +0.5 2.0 hypothetical protein compare
BWI76_RS04200 +0.5 1.8 phosphoglycerate mutase GpmB compare
BWI76_RS12600 +0.5 2.0 MFS transporter compare
BWI76_RS13955 +0.5 1.4 hypothetical protein compare
BWI76_RS06060 +0.5 2.3 DNA-binding response regulator compare
BWI76_RS12865 +0.5 2.0 acetylornithine deacetylase compare
BWI76_RS25485 +0.5 1.0 septum formation protein Maf compare
BWI76_RS24885 +0.5 0.4 PTS galactitol transporter subunit IIB compare
BWI76_RS11255 +0.5 0.9 putrescine/spermidine ABC transporter ATP-binding protein compare
BWI76_RS11880 +0.5 2.2 23S rRNA pseudouridylate synthase B compare
BWI76_RS10560 +0.5 2.0 gamma-glutamyltransferase compare
BWI76_RS13680 +0.5 2.3 methyl viologen resistance protein SmvA compare
BWI76_RS26140 +0.5 0.9 GMP/IMP nucleotidase compare
BWI76_RS13275 +0.5 0.9 hypothetical protein compare


Specific Phenotypes

For 6 genes in this experiment

For mixed community Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL in Klebsiella michiganensis M5al

For mixed community Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL across organisms