Experiment set14IT049 for Klebsiella michiganensis M5al

Compare to:

Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL

200 most detrimental genes:

  gene name fitness t score description  
BWI76_RS21540 +3.1 12.9 membrane protein compare
BWI76_RS01225 +3.0 7.7 magnesium transporter CorA compare
BWI76_RS11810 +2.6 3.1 outer membrane protein OmpW compare
BWI76_RS08120 +2.3 4.3 cobalt transporter compare
BWI76_RS05235 +2.2 1.8 hypothetical protein compare
BWI76_RS01585 +1.8 6.7 transcriptional regulator compare
BWI76_RS09725 +1.7 1.6 MurR/RpiR family transcriptional regulator compare
BWI76_RS21675 +1.7 0.9 hypothetical protein compare
BWI76_RS18755 +1.6 1.6 adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase compare
BWI76_RS00865 +1.6 2.6 DNA-binding transcriptional regulator OxyR compare
BWI76_RS10745 +1.6 1.0 hypothetical protein compare
BWI76_RS11515 +1.6 2.3 peptide-methionine (R)-S-oxide reductase compare
BWI76_RS17675 +1.5 1.7 hypothetical protein compare
BWI76_RS25285 +1.5 1.3 HPr family phosphocarrier protein compare
BWI76_RS13480 +1.5 1.2 XRE family transcriptional regulator compare
BWI76_RS05570 +1.4 1.1 hypothetical protein compare
BWI76_RS10500 +1.4 2.6 flavoprotein monooxygenase compare
BWI76_RS11335 +1.4 1.8 tautomerase compare
BWI76_RS11040 +1.4 2.8 ribonuclease E compare
BWI76_RS02745 +1.4 1.3 hypothetical protein compare
BWI76_RS13445 +1.4 1.4 alpha/beta hydrolase compare
BWI76_RS19240 +1.4 2.0 ABC transporter substrate-binding protein compare
BWI76_RS19360 +1.4 2.5 glucose dehydrogenase compare
BWI76_RS23895 +1.4 0.8 Xaa-Pro aminopeptidase compare
BWI76_RS11430 +1.3 0.9 lipoprotein compare
BWI76_RS18770 +1.3 1.1 DNA gyrase inhibitor compare
BWI76_RS23915 +1.3 1.9 5-formyltetrahydrofolate cyclo-ligase compare
BWI76_RS06190 +1.3 1.6 hypothetical protein compare
BWI76_RS13420 +1.3 1.4 ABC transporter permease compare
BWI76_RS19880 +1.3 4.1 magnesium transporter compare
BWI76_RS21375 +1.3 1.0 autonomous glycyl radical cofactor GrcA compare
BWI76_RS03045 +1.3 1.7 hypothetical protein compare
BWI76_RS09460 +1.3 2.9 spermidine/putrescine ABC transporter substrate-binding protein PotF compare
BWI76_RS27735 +1.3 3.7 hypothetical protein compare
BWI76_RS04060 +1.3 2.0 hypothetical protein compare
BWI76_RS26890 +1.3 1.1 hypothetical protein compare
BWI76_RS26285 +1.3 4.8 glycerophosphodiester phosphodiesterase compare
BWI76_RS17945 +1.2 1.2 hypothetical protein compare
BWI76_RS11680 +1.2 3.8 succinylglutamate-semialdehyde dehydrogenase compare
BWI76_RS09830 +1.2 2.3 tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM compare
BWI76_RS19850 +1.2 2.8 tRNA-Pro compare
BWI76_RS17900 +1.2 3.7 PTS mannose transporter subunit IID compare
BWI76_RS15735 +1.2 2.1 hypothetical protein compare
BWI76_RS00375 +1.2 2.6 hypothetical protein compare
BWI76_RS18810 +1.2 1.8 nitrogenase iron protein compare
BWI76_RS21945 +1.2 2.3 LysR family transcriptional regulator compare
BWI76_RS00725 +1.2 3.2 periplasmic repressor CpxP compare
BWI76_RS14540 +1.2 1.9 yersiniabactin biosynthetic protein YbtU compare
BWI76_RS01895 +1.2 1.8 cupin compare
BWI76_RS06865 +1.2 1.3 bifunctional UDP-sugar hydrolase/5'-nucleotidase compare
BWI76_RS25915 +1.2 4.0 protein SlyX compare
BWI76_RS21535 +1.2 2.0 inner membrane protein YpjD compare
BWI76_RS13215 +1.2 1.5 type I glyceraldehyde-3-phosphate dehydrogenase compare
BWI76_RS19310 +1.2 2.6 ABC transporter permease compare
BWI76_RS24110 +1.2 1.1 YggU family protein compare
BWI76_RS11255 +1.2 1.1 putrescine/spermidine ABC transporter ATP-binding protein compare
BWI76_RS23030 +1.2 2.1 cobalamin biosynthesis protein CbiM compare
BWI76_RS11790 +1.2 2.1 acyl-CoA thioesterase compare
BWI76_RS04895 +1.2 1.3 hypothetical protein compare
BWI76_RS14835 +1.2 1.3 hypothetical protein compare
BWI76_RS03610 +1.2 3.8 hypothetical protein compare
BWI76_RS07265 +1.2 2.1 ABC transporter ATP-binding protein compare
BWI76_RS23505 +1.2 7.9 ferrous iron transporter B compare
BWI76_RS14170 +1.2 2.5 hypothetical protein compare
BWI76_RS12865 +1.2 2.4 acetylornithine deacetylase compare
BWI76_RS18725 +1.1 4.3 hypothetical protein compare
BWI76_RS04560 +1.1 3.0 holo-ACP synthase CitX compare
BWI76_RS21810 +1.1 1.3 universal stress protein compare
BWI76_RS07985 +1.1 0.9 fluoride ion transporter CrcB compare
BWI76_RS10875 +1.1 2.0 quercetin 2,3-dioxygenase compare
BWI76_RS06175 +1.1 2.5 DUF188 domain-containing protein compare
BWI76_RS21485 +1.1 4.9 DUF4154 domain-containing protein compare
BWI76_RS21100 +1.1 1.8 nucleoside-diphosphate kinase compare
BWI76_RS06120 +1.1 1.4 membrane protein compare
BWI76_RS20800 +1.1 2.2 carboxysome shell protein compare
BWI76_RS17770 +1.1 1.1 isomerase/hydrolase compare
BWI76_RS03825 +1.1 2.1 4-hydroxyphenylacetate 3-monooxygenase compare
BWI76_RS08615 +1.1 5.1 galactokinase compare
BWI76_RS23195 +1.1 1.9 ethanolamine utilization protein EutP compare
BWI76_RS20960 +1.1 4.5 ROK family protein compare
BWI76_RS11700 +1.1 1.3 hypothetical protein compare
BWI76_RS07730 +1.1 0.5 iron-enterobactin transporter membrane protein compare
BWI76_RS21490 +1.1 4.3 GGDEF domain-containing protein compare
BWI76_RS12665 +1.0 2.0 hypothetical protein compare
BWI76_RS25980 +1.0 1.6 hypothetical protein compare
BWI76_RS11455 +1.0 2.4 AraC family transcriptional regulator compare
BWI76_RS19480 +1.0 1.5 transcriptional regulator compare
BWI76_RS20160 +1.0 1.4 NADH-quinone oxidoreductase subunit H compare
BWI76_RS12790 +1.0 0.7 lactate dehydrogenase compare
BWI76_RS13955 +1.0 2.3 hypothetical protein compare
BWI76_RS11525 +1.0 2.3 HNH endonuclease compare
BWI76_RS12620 +1.0 3.1 2-nitropropane dioxygenase compare
BWI76_RS08310 +1.0 0.9 potassium-transporting ATPase subunit C compare
BWI76_RS11435 +1.0 1.2 hypothetical protein compare
BWI76_RS01000 +1.0 2.0 peptidyl-prolyl cis-trans isomerase compare
BWI76_RS14805 +1.0 1.4 hypothetical protein compare
BWI76_RS12695 +1.0 1.8 zinc transporter ZntB compare
BWI76_RS16120 +1.0 1.8 4-carboxymuconolactone decarboxylase compare
BWI76_RS12520 +1.0 1.6 hypothetical protein compare
BWI76_RS13095 +1.0 0.9 phenylacetate-CoA oxygenase subunit PaaB compare
BWI76_RS04050 +1.0 1.6 hydroxamate siderophore iron reductase FhuF compare
BWI76_RS00025 +1.0 0.8 hypothetical protein compare
BWI76_RS17375 +1.0 1.7 nitrate ABC transporter, permease protein compare
BWI76_RS01010 +1.0 4.4 uridine phosphorylase compare
BWI76_RS08260 +1.0 1.8 LysR family transcriptional regulator compare
BWI76_RS11780 +1.0 1.0 2-deoxyglucose-6-phosphatase compare
BWI76_RS20795 +1.0 1.0 ethanolamine catabolic microcompartment shell protein EutN compare
BWI76_RS08620 +1.0 3.1 galactose-1-phosphate uridylyltransferase compare
BWI76_RS13805 +1.0 2.1 inorganic diphosphatase compare
BWI76_RS04805 +1.0 2.0 8-oxo-dGTP diphosphatase compare
BWI76_RS05415 +1.0 2.5 LysR family transcriptional regulator compare
BWI76_RS06295 +1.0 3.0 S-adenosylmethionine:tRNA ribosyltransferase-isomerase compare
BWI76_RS07060 +1.0 2.1 carbamate kinase compare
BWI76_RS10725 +0.9 1.6 hypothetical protein compare
BWI76_RS02785 +0.9 2.3 AIG2 family protein compare
BWI76_RS01015 +0.9 1.5 nicotinamide riboside transporter PnuC compare
BWI76_RS04960 +0.9 2.4 carbonate dehydratase compare
BWI76_RS17645 +0.9 2.5 hypothetical protein compare
BWI76_RS07475 +0.9 1.2 DNA-binding transcriptional regulator RamA compare
BWI76_RS19585 +0.9 1.5 gentisate 1,2-dioxygenase compare
BWI76_RS25220 +0.9 1.8 outer membrane lipid asymmetry maintenance protein MlaD compare
BWI76_RS06200 +0.9 1.9 hypothetical protein compare
BWI76_RS12670 +0.9 1.2 DNA polymerase V subunit UmuD compare
BWI76_RS16000 +0.9 1.1 multidrug transporter subunit MdtI compare
BWI76_RS11815 +0.9 0.8 hypothetical protein compare
BWI76_RS18565 +0.9 1.6 pemk protein compare
BWI76_RS24180 +0.9 0.9 hypothetical protein compare
BWI76_RS16330 +0.9 1.8 oxidoreductase compare
BWI76_RS15300 +0.9 2.6 multiple antibiotic resistance regulatory periplasmic protein MarB compare
BWI76_RS11890 +0.9 2.8 glycosyl hydrolase compare
BWI76_RS08815 +0.9 2.9 cyclic pyranopterin phosphate synthase compare
BWI76_RS20565 +0.9 1.7 hypothetical protein compare
BWI76_RS12825 +0.9 1.7 hypothetical protein compare
BWI76_RS16795 +0.9 1.3 amino acid ABC transporter ATPase compare
BWI76_RS02655 +0.9 1.9 hypothetical protein compare
BWI76_RS27175 +0.9 2.6 hypothetical protein compare
BWI76_RS16055 +0.9 2.9 malonate decarboxylase subunit epsilon compare
BWI76_RS19245 +0.9 2.5 dimethylargininase compare
BWI76_RS23765 +0.9 3.5 peptidase M23 compare
BWI76_RS09165 +0.9 2.5 phosphatase YbjI compare
BWI76_RS20560 +0.9 2.4 hypothetical protein compare
BWI76_RS23705 +0.9 1.7 2-deoxy-D-ribonyl-CoA 3-dehydrogenase (from data) compare
BWI76_RS20940 +0.9 2.2 uracil/xanthine transporter compare
BWI76_RS09085 +0.9 2.6 molybdopterin molybdenumtransferase MoeA compare
BWI76_RS20675 +0.9 3.7 GMP synthase compare
BWI76_RS09440 +0.9 1.2 hypothetical protein compare
BWI76_RS11600 +0.9 1.5 selenide, water dikinase SelD compare
BWI76_RS12780 +0.9 1.5 hypothetical protein compare
BWI76_RS00420 +0.9 1.9 hypothetical protein compare
BWI76_RS16655 +0.9 4.1 CatA-like O-acetyltransferase compare
BWI76_RS16300 +0.9 1.5 bifunctional beta-cystathionase/maltose regulon regulatory protein compare
BWI76_RS04155 +0.9 3.5 membrane protein compare
BWI76_RS12755 +0.9 2.2 hypothetical protein compare
BWI76_RS04900 +0.9 1.9 DUF2950 domain-containing protein compare
BWI76_RS01855 +0.9 2.0 chorismate lyase compare
BWI76_RS23710 +0.9 2.3 3-keto-2-deoxy-D-ribonyl-CoA thiolase (from data) compare
BWI76_RS15080 +0.9 6.0 hypothetical protein compare
BWI76_RS16205 +0.9 2.1 NAD(P) transhydrogenase subunit alpha compare
BWI76_RS07855 +0.9 1.9 PucR family transcriptional regulator compare
BWI76_RS06015 +0.9 0.9 hypothetical protein compare
BWI76_RS18885 +0.9 1.3 nitrogen fixation regulatory protein compare
BWI76_RS27940 +0.9 1.0 2-dehydro-3-deoxy-6-phosphogalactonate aldolase compare
BWI76_RS15445 +0.9 1.9 hypothetical protein compare
BWI76_RS00885 +0.9 1.7 tRNA (uridine(54)-C5)-methyltransferase TrmA compare
BWI76_RS17230 +0.9 1.6 peptide ABC transporter permease compare
BWI76_RS02725 +0.9 0.6 HxlR family transcriptional regulator compare
BWI76_RS19700 +0.8 1.2 deoxyribonuclease IV compare
BWI76_RS23185 +0.8 1.7 propanediol utilization: polyhedral bodies pduT compare
BWI76_RS26805 +0.8 1.7 cellulose biosynthesis protein BcsF compare
BWI76_RS11830 +0.8 2.5 hypothetical protein compare
BWI76_RS13515 +0.8 2.0 amino acid permease compare
BWI76_RS04055 +0.8 6.2 GGDEF domain-containing protein compare
BWI76_RS01835 +0.8 3.0 chemotaxis protein CheW compare
BWI76_RS16395 +0.8 1.8 glutathione S-transferase compare
BWI76_RS15265 +0.8 1.9 hypothetical protein compare
BWI76_RS18455 +0.8 0.6 tRNA-Ser compare
BWI76_RS16660 +0.8 2.0 SfnB family sulfur acquisition oxidoreductase compare
BWI76_RS15085 +0.8 3.3 3-deoxy-D-arabinose-heptulosonic-7-phosphate synthase compare
BWI76_RS20430 +0.8 2.2 penicillin-insensitive murein endopeptidase compare
BWI76_RS23470 +0.8 4.4 hypothetical protein compare
BWI76_RS23575 +0.8 1.5 hypothetical protein compare
BWI76_RS16525 +0.8 1.9 cyclopropane-fatty-acyl-phospholipid synthase compare
BWI76_RS07620 +0.8 2.9 transcriptional regulator BetI compare
BWI76_RS20970 +0.8 1.0 phosphoribosylglycinamide formyltransferase compare
BWI76_RS13170 +0.8 0.9 methyltransferase compare
BWI76_RS16160 +0.8 1.3 LysR family transcriptional regulator compare
BWI76_RS20230 +0.8 0.6 hypothetical protein compare
BWI76_RS11500 +0.8 3.9 D-hexose-6-phosphate mutarotase compare
BWI76_RS16015 +0.8 1.3 pheromone autoinducer 2 transporter compare
BWI76_RS18890 +0.8 3.1 nif-specific transcriptional activator NifA compare
BWI76_RS20220 +0.8 2.5 sugar phosphatase compare
BWI76_RS10270 +0.8 3.4 acetylornithine deacetylase compare
BWI76_RS06325 +0.8 2.0 hypothetical protein compare
BWI76_RS00820 +0.8 2.2 fructose-6-phosphate aldolase compare
BWI76_RS11880 +0.8 1.9 23S rRNA pseudouridylate synthase B compare
BWI76_RS17085 +0.8 2.5 hypothetical protein compare
BWI76_RS23250 +0.8 1.5 hypothetical protein compare
BWI76_RS16335 +0.8 0.9 division septum protein Blr compare
BWI76_RS21495 +0.8 2.4 outer membrane lipoprotein compare
BWI76_RS18385 +0.8 1.0 hypothetical protein compare


Specific Phenotypes

For 7 genes in this experiment

For mixed community Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL in Klebsiella michiganensis M5al

For mixed community Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL across organisms