Experiment set14IT049 for Klebsiella michiganensis M5al
Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL
Group: mixed communityMedia: Fungal_growth_media_mCAFEs_v1 + Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL
Culturing: Koxy_ML2a, 24-well transparent microplate; Multitron, Aerobic, at 30 (C), shaken=700 rpm
By: Trenton on 7/18/2018
Media components: 20 g/L D-Glucose, 0.2 g/L Magnesium Sulfate Heptahydrate, 0.9 g/L Potassium phosphate dibasic, 0.2 g/L Potassium Chloride, 1 g/L Ammonium Nitrate, 0.002 g/L Iron (II) sulfate heptahydrate, 0.002 g/L Zinc sulfate heptahydrate, 0.002 g/L Manganese (II) chloride tetrahydrate, 0.002 g/L Cobalt chloride hexahydrate
Growth plate: Plate 3 A1
Specific Phenotypes
For 7 genes in this experiment
SEED Subsystems
Metabolic Maps
Color code by fitness: see overview map or list of maps.
Maps containing gene(s) with specific phenotypes:
- Puromycin biosynthesis
- beta-Alanine metabolism
- Nucleotide sugars metabolism
- alpha-Linolenic acid metabolism
- Trinitrotoluene degradation
- Vitamin B6 metabolism
- Pantothenate and CoA biosynthesis
- Porphyrin and chlorophyll metabolism
- Carotenoid biosynthesis - General
- Alkaloid biosynthesis I
- Insect hormone biosynthesis
MetaCyc Pathways
Pathways that contain genes with specific phenotypes:
Pathway | #Steps | #Present | #Specific |
---|---|---|---|
phosphopantothenate biosynthesis I | 4 | 4 | 1 |
pyridoxal 5'-phosphate biosynthesis I | 7 | 7 | 1 |
superpathway of coenzyme A biosynthesis I (bacteria) | 9 | 9 | 1 |
superpathway of coenzyme A biosynthesis II (plants) | 10 | 5 | 1 |
superpathway of pyridoxal 5'-phosphate biosynthesis and salvage | 12 | 12 | 1 |