Experiment set14IT048 for Klebsiella michiganensis M5al

Compare to:

Fungal_growth_media_mCAFEs_v1 with Carbenicillin disodium salt 0.008 mg/mL

200 most important genes:

  gene name fitness t score description  
BWI76_RS04250 -7.5 -5.2 homoserine kinase compare
BWI76_RS20965 -7.4 -3.8 phosphoribosylformylglycinamidine cyclo-ligase compare
BWI76_RS18940 -7.2 -4.5 imidazole glycerol phosphate synthase subunit HisH compare
BWI76_RS11965 -7.0 -4.1 orotidine-5'-phosphate decarboxylase compare
BWI76_RS25115 -6.9 -6.7 argininosuccinate synthase compare
BWI76_RS20350 -6.8 -6.2 amidophosphoribosyltransferase compare
BWI76_RS18935 -6.6 -8.1 bifunctional imidazole glycerol-phosphate dehydratase/histidinol phosphatase compare
BWI76_RS21265 -6.5 -13.3 phosphoribosylformylglycinamidine synthase compare
BWI76_RS01610 -6.2 -8.7 phosphoribosylamine--glycine ligase compare
BWI76_RS00850 -6.0 -8.1 acetylglutamate kinase compare
BWI76_RS23365 -5.7 -3.1 LysR family transcriptional regulator compare
BWI76_RS18925 -5.6 -4.6 histidinol dehydrogenase compare
BWI76_RS11840 -5.6 -2.4 tryptophan synthase subunit alpha compare
BWI76_RS01615 -5.5 -7.5 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase compare
BWI76_RS27385 -5.5 -6.5 orotate phosphoribosyltransferase compare
BWI76_RS07070 -5.4 -3.7 5-(carboxyamino)imidazole ribonucleotide mutase compare
BWI76_RS18920 -5.3 -3.1 ATP phosphoribosyltransferase compare
BWI76_RS04255 -5.2 -10.1 threonine synthase compare
BWI76_RS04675 -5.2 -5.1 3-isopropylmalate dehydrogenase compare
BWI76_RS04245 -5.0 -14.1 bifunctional aspartate kinase/homoserine dehydrogenase I compare
BWI76_RS20895 -4.9 -3.4 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
BWI76_RS23220 -4.8 -8.2 amino-acid N-acetyltransferase compare
BWI76_RS00845 -4.8 -9.7 N-acetyl-gamma-glutamyl-phosphate reductase compare
BWI76_RS16490 -4.7 -1.4 glutaredoxin compare
BWI76_RS18930 -4.7 -2.9 histidinol-phosphate transaminase compare
BWI76_RS26460 -4.6 -3.2 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
BWI76_RS26455 -4.6 -1.9 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase compare
BWI76_RS18950 -4.6 -4.1 imidazole glycerol phosphate synthase cyclase subunit compare
BWI76_RS04470 -4.5 -8.2 carbamoyl phosphate synthase large subunit compare
BWI76_RS00990 -4.5 -10.7 ketol-acid reductoisomerase compare
BWI76_RS04670 -4.3 -9.5 3-isopropylmalate dehydratase large subunit compare
BWI76_RS02995 -4.3 -7.0 aspartate carbamoyltransferase compare
BWI76_RS10990 -4.3 -1.9 dihydroorotase compare
BWI76_RS00875 -4.2 -4.1 DNA-binding transcriptional regulator FabR compare
BWI76_RS19870 -4.2 -3.8 malate:quinone oxidoreductase compare
BWI76_RS23265 -4.1 -1.7 hypothetical protein compare
BWI76_RS08385 -4.1 -3.0 citrate (Si)-synthase compare
BWI76_RS04465 -4.1 -5.2 carbamoyl-phosphate synthase small subunit compare
BWI76_RS02815 -4.1 -2.0 fructose-bisphosphatase class I compare
BWI76_RS00855 -4.1 -7.1 argininosuccinate lyase compare
BWI76_RS07065 -4.0 -5.8 5-(carboxyamino)imidazole ribonucleotide synthase compare
BWI76_RS18955 -4.0 -4.8 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase compare
BWI76_RS08520 -4.0 -2.0 colicin transporter TolQ compare
BWI76_RS00835 -4.0 -12.0 phosphoenolpyruvate carboxylase compare
BWI76_RS09910 -3.9 -15.2 dihydroorotate dehydrogenase (quinone) compare
BWI76_RS04665 -3.9 -15.4 3-isopropylmalate dehydratase small subunit compare
BWI76_RS11850 -3.9 -8.1 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase compare
BWI76_RS22690 -3.8 -2.5 adenylyl-sulfate kinase compare
BWI76_RS09760 -3.8 -2.6 3-phosphoshikimate 1-carboxyvinyltransferase compare
BWI76_RS15350 -3.8 -1.1 hypothetical protein compare
BWI76_RS00975 -3.7 -6.8 dihydroxy-acid dehydratase compare
BWI76_RS04525 -3.7 -1.8 4-hydroxythreonine-4-phosphate dehydrogenase PdxA compare
BWI76_RS00805 -3.7 -5.2 5,10-methylenetetrahydrofolate reductase compare
BWI76_RS03010 -3.7 -6.9 ornithine carbamoyltransferase compare
BWI76_RS24285 -3.7 -9.2 cystathionine beta-lyase compare
BWI76_RS04240 -3.6 -1.2 thr operon leader peptide compare
BWI76_RS22760 -3.6 -6.4 sulfite reductase subunit beta compare
BWI76_RS05015 -3.5 -2.1 transcriptional regulator compare
BWI76_RS13755 -3.5 -1.4 hypothetical protein compare
BWI76_RS11610 -3.5 -2.0 glutamate dehydrogenase compare
BWI76_RS25700 -3.5 -4.9 heavy metal-responsive transcriptional regulator compare
BWI76_RS21070 -3.5 -1.7 outer membrane protein assembly factor BamB compare
BWI76_RS25335 -3.4 -1.7 stringent starvation protein A compare
BWI76_RS26000 -3.4 -5.3 aspartate aminotransferase family protein compare
BWI76_RS08530 -3.3 -1.4 protein TolA compare
BWI76_RS11845 -3.3 -1.8 tryptophan synthase subunit beta compare
BWI76_RS20355 -3.2 -1.8 colicin V production protein compare
BWI76_RS08500 -3.2 -1.8 cytochrome d ubiquinol oxidase subunit 2 compare
BWI76_RS26425 -3.2 -5.6 zinc/cadmium/mercury/lead-transporting ATPase compare
BWI76_RS00980 -3.2 -7.7 PLP-dependent threonine dehydratase compare
BWI76_RS22765 -3.2 -9.1 sulfite reductase subunit alpha compare
BWI76_RS05835 -3.1 -1.8 gamma-glutamyl-phosphate reductase compare
BWI76_RS10745 -3.1 -0.9 hypothetical protein compare
BWI76_RS04680 -3.1 -10.3 2-isopropylmalate synthase compare
BWI76_RS22755 -3.1 -4.2 phosphoadenosine phosphosulfate reductase compare
BWI76_RS25645 -3.1 -5.9 shikimate dehydrogenase compare
BWI76_RS23920 -3.1 -1.9 D-3-phosphoglycerate dehydrogenase compare
BWI76_RS04645 -3.1 -2.1 3-dehydroquinase compare
BWI76_RS21465 -3.0 -5.0 bifunctional chorismate mutase/prephenate dehydratase compare
BWI76_RS01655 -3.0 -8.5 homoserine O-succinyltransferase compare
BWI76_RS11860 -3.0 -6.5 anthranilate synthase component I compare
BWI76_RS08525 -2.9 -1.3 colicin transporter compare
BWI76_RS14300 -2.9 -2.7 hypothetical protein compare
BWI76_RS00965 -2.9 -0.8 acetolactate synthase 2 small subunit compare
BWI76_RS06475 -2.9 -1.2 protoheme IX farnesyltransferase compare
BWI76_RS07465 -2.9 -1.2 TetR family transcriptional regulator compare
BWI76_RS04685 -2.9 -7.4 putative leucine operon leader peptide compare
BWI76_RS09755 -2.9 -2.0 phosphoserine transaminase compare
BWI76_RS25960 -2.8 -3.3 NUDIX hydrolase compare
BWI76_RS27390 -2.8 -3.2 ribonuclease PH compare
BWI76_RS06535 -2.7 -1.9 endopeptidase La compare
BWI76_RS04100 -2.7 -2.6 peptide chain release factor 3 compare
BWI76_RS16895 -2.7 -1.1 3-(3-hydroxy-phenyl)propionate transporter MhpT compare
BWI76_RS01870 -2.7 -3.6 diacylglycerol kinase compare
BWI76_RS00785 -2.7 -4.8 cystathionine gamma-synthase compare
BWI76_RS11520 -2.7 -1.1 hypothetical protein compare
BWI76_RS26620 -2.6 -0.8 Fe-S biogenesis protein NfuA compare
BWI76_RS11635 -2.6 -1.5 ABC transporter compare
BWI76_RS08210 -2.6 -1.0 N-acetylglucosamine-6-phosphate deacetylase compare
BWI76_RS07215 -2.5 -8.9 class A extended-spectrum beta-lactamase OXY-6-4 compare
BWI76_RS21580 -2.5 -1.2 SsrA-binding protein compare
BWI76_RS08535 -2.5 -1.2 translocation protein TolB compare
BWI76_RS26665 -2.5 -3.3 DNA-binding response regulator compare
BWI76_RS15825 -2.5 -1.0 hypothetical protein compare
BWI76_RS01800 -2.5 -2.4 glucose-6-phosphate isomerase compare
BWI76_RS21360 -2.5 -9.7 L-aspartate oxidase compare
BWI76_RS09645 -2.5 -0.7 thioredoxin-disulfide reductase compare
BWI76_RS21450 -2.4 -1.8 23S rRNA pseudouridine(1911/1915/1917) synthase compare
BWI76_RS20380 -2.4 -0.7 tRNA pseudouridine(38-40) synthase TruA compare
BWI76_RS20390 -2.4 -3.3 erythronate-4-phosphate dehydrogenase compare
BWI76_RS00960 -2.4 -3.7 acetolactate synthase 2 catalytic subunit compare
BWI76_RS22805 -2.4 -6.0 GTP diphosphokinase compare
BWI76_RS08040 -2.3 -1.9 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH compare
BWI76_RS26390 -2.3 -6.3 cell division protein FtsX compare
BWI76_RS25070 -2.3 -1.3 hypothetical protein compare
BWI76_RS15535 -2.3 -2.5 hypothetical protein compare
BWI76_RS23490 -2.3 -5.9 fimbrial protein compare
BWI76_RS21340 -2.3 -1.8 SoxR reducing system protein RseC compare
BWI76_RS01275 -2.3 -5.5 LysR family transcriptional regulator compare
BWI76_RS25300 -2.3 -3.1 hybrid sensor histidine kinase/response regulator compare
BWI76_RS05840 -2.3 -2.8 glutamate 5-kinase compare
BWI76_RS11855 -2.3 -6.6 bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase compare
BWI76_RS21370 -2.3 -0.9 ATP-dependent RNA helicase SrmB compare
BWI76_RS20440 -2.3 -2.3 50S ribosomal protein L3 N(5)-glutamine methyltransferase compare
BWI76_RS01095 -2.2 -1.9 UDP-N-acetyl-D-mannosamine dehydrogenase compare
BWI76_RS17975 -2.2 -2.3 tail-specific protease compare
BWI76_RS20970 -2.2 -1.6 phosphoribosylglycinamide formyltransferase compare
BWI76_RS21075 -2.2 -1.5 membrane protein compare
BWI76_RS22090 -2.2 -1.7 transcriptional regulator compare
BWI76_RS18605 -2.2 -1.7 oxidoreductase molybdopterin-binding protein compare
BWI76_RS16210 -2.2 -1.2 hypothetical protein compare
BWI76_RS06290 -2.2 -1.6 ACP phosphodiesterase compare
BWI76_RS25920 -2.2 -1.4 peptidylprolyl isomerase compare
BWI76_RS10935 -2.2 -3.3 glucan biosynthesis glucosyltransferase H compare
BWI76_RS03660 -2.2 -2.5 hypothetical protein compare
BWI76_RS19700 -2.1 -1.8 deoxyribonuclease IV compare
BWI76_RS20730 -2.1 -1.5 hypothetical protein compare
BWI76_RS09640 -2.1 -2.0 cysteine/glutathione ABC transporter permease/ATP-binding protein CydD compare
BWI76_RS19770 -2.1 -1.5 bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase compare
BWI76_RS25425 -2.1 -0.8 arginine repressor compare
BWI76_RS26395 -2.1 -4.9 cell division protein FtsE compare
BWI76_RS24605 -2.1 -4.7 dihydroxyacetone kinase subunit DhaM compare
BWI76_RS01900 -2.0 -5.3 tRNA-dihydrouridine synthase A compare
BWI76_RS16315 -2.0 -1.2 SirA-like protein compare
BWI76_RS23360 -2.0 -1.1 diaminopimelate decarboxylase compare
BWI76_RS14305 -2.0 -3.2 metallophosphoesterase compare
BWI76_RS04845 -2.0 -5.1 nicotinate-nucleotide pyrophosphorylase compare
BWI76_RS02530 -2.0 -1.3 tRNA dimethylallyltransferase compare
BWI76_RS24610 -2.0 -2.3 dihydroxyacetone kinase compare
BWI76_RS08580 -2.0 -2.1 quinolinate synthetase compare
BWI76_RS01115 -2.0 -1.7 dTDP-4-amino-4,6-dideoxygalactose transaminase compare
BWI76_RS12225 -2.0 -2.4 hypothetical protein compare
BWI76_RS23885 -2.0 -0.8 2-octaprenylphenol hydroxylase compare
BWI76_RS17980 -2.0 -2.7 RNA chaperone ProQ compare
BWI76_RS04160 -1.9 -1.9 phosphoserine phosphatase compare
BWI76_RS24580 -1.9 -3.6 PTS-dependent dihydroxyacetone kinase operon transcriptional regulator DhaR compare
BWI76_RS00755 -1.9 -3.1 ATP-dependent protease subunit HslV compare
BWI76_RS16360 -1.9 -0.9 electron transport complex subunit RsxB compare
BWI76_RS23285 -1.9 -1.8 hypothetical protein compare
BWI76_RS11440 -1.9 -1.1 hypothetical protein compare
BWI76_RS00720 -1.9 -1.5 DNA-binding response regulator compare
BWI76_RS13445 -1.9 -1.0 alpha/beta hydrolase compare
BWI76_RS09730 -1.9 -0.7 pyruvate formate lyase 1-activating protein compare
BWI76_RS01110 -1.9 -3.5 TDP-fucosamine acetyltransferase compare
BWI76_RS19840 -1.8 -0.5 hypothetical protein compare
BWI76_RS25315 -1.8 -7.0 glutamate synthase large subunit compare
BWI76_RS15835 -1.8 -1.4 hypothetical protein compare
BWI76_RS24740 -1.8 -2.3 GntR family transcriptional regulator compare
BWI76_RS01795 -1.8 -2.4 hypothetical protein compare
BWI76_RS00180 -1.8 -0.7 F0F1 ATP synthase subunit epsilon compare
BWI76_RS09190 -1.8 -1.2 hypothetical protein compare
BWI76_RS05005 -1.8 -2.0 polynucleotide adenylyltransferase compare
BWI76_RS01540 -1.8 -2.3 thiamine biosynthesis protein ThiS compare
BWI76_RS24340 -1.8 -4.7 two-component sensor histidine kinase compare
BWI76_RS14005 -1.7 -1.2 TetR family transcriptional regulator compare
BWI76_RS06405 -1.7 -1.8 2-dehydropantoate 2-reductase compare
BWI76_RS13560 -1.7 -0.7 amino acid ABC transporter substrate-binding subunit compare
BWI76_RS16375 -1.7 -1.1 electron transport complex subunit G compare
BWI76_RS09030 -1.7 -3.8 transpeptidase compare
BWI76_RS01135 -1.7 -3.7 lipopolysaccharide N-acetylmannosaminouronosyltransferase compare
BWI76_RS11190 -1.7 -1.8 putative TetR/AcrR family transcriptional regulatory protein compare
BWI76_RS17370 -1.7 -1.6 nitrate transporter NasD compare
BWI76_RS09970 -1.7 -0.9 porin OmpA compare
BWI76_RS16965 -1.6 -1.6 murein lipoprotein compare
BWI76_RS21475 -1.6 -1.5 bifunctional chorismate mutase/prephenate dehydrogenase compare
BWI76_RS09335 -1.6 -0.9 baseplate assembly protein W compare
BWI76_RS00240 -1.6 -1.2 FMN-binding protein MioC compare
BWI76_RS15290 -1.6 -1.0 transcriptional regulator compare
BWI76_RS22475 -1.6 -1.9 heme ABC transporter ATP-binding protein compare
BWI76_RS12345 -1.6 -2.0 nitrite transporter compare
BWI76_RS27440 -1.6 -1.1 DNA helicase RecG compare
BWI76_RS19035 -1.6 -5.5 dTDP-rhamnosyl transferase compare
BWI76_RS24900 -1.6 -0.9 DeoR family transcriptional regulator compare
BWI76_RS21810 -1.6 -1.1 universal stress protein compare
BWI76_RS00345 -1.6 -2.6 protein disulfide oxidoreductase DsbA compare
BWI76_RS00750 -1.5 -2.5 ATP-dependent protease ATP-binding subunit HslU compare
BWI76_RS12495 -1.5 -0.9 2-Cys peroxiredoxin compare
BWI76_RS01535 -1.5 -3.9 thiazole synthase compare
BWI76_RS21505 -1.5 -1.0 hypothetical protein compare
BWI76_RS20640 -1.5 -2.2 cysteine synthase A compare


Specific Phenotypes

For 4 genes in this experiment

For stress Carbenicillin disodium salt in Klebsiella michiganensis M5al

For stress Carbenicillin disodium salt across organisms