Experiment set14IT047 for Klebsiella michiganensis M5al

Compare to:

Fungal_growth_media_mCAFEs_v1 with Phosphomycin disodium salt 0.01 mg/mL

Group: stress
Media: Fungal_growth_media_mCAFEs_v1 + Phosphomycin disodium salt (0.01 mg/mL)
Culturing: Koxy_ML2a, 24-well transparent microplate; Multitron, Aerobic, at 30 (C), shaken=700 rpm
By: Trenton on 7/18/2018
Media components: 20 g/L D-Glucose, 0.2 g/L Magnesium Sulfate Heptahydrate, 0.9 g/L Potassium phosphate dibasic, 0.2 g/L Potassium Chloride, 1 g/L Ammonium Nitrate, 0.002 g/L Iron (II) sulfate heptahydrate, 0.002 g/L Zinc sulfate heptahydrate, 0.002 g/L Manganese (II) chloride tetrahydrate, 0.002 g/L Cobalt chloride hexahydrate
Growth plate: Plate 2 D5

Specific Phenotypes

For 11 genes in this experiment

For stress Phosphomycin disodium salt in Klebsiella michiganensis M5al

For stress Phosphomycin disodium salt across organisms

SEED Subsystems

Subsystem #Specific
Bacterial Cytoskeleton 2
Bacterial Cell Division 1
KDO2-Lipid A biosynthesis 1
Orphan regulatory proteins 1
Pyridoxin (Vitamin B6) Biosynthesis 1
Serine-glyoxylate cycle 1

Metabolic Maps

Color code by fitness: see overview map or list of maps.

Maps containing gene(s) with specific phenotypes:

MetaCyc Pathways

Pathways that contain genes with specific phenotypes:

Pathway #Steps #Present #Specific
glyoxylate cycle 6 6 1
pyridoxal 5'-phosphate biosynthesis I 7 7 1
peptidoglycan recycling II 10 7 1
superpathway of pyridoxal 5'-phosphate biosynthesis and salvage 12 12 1
superpathway of glyoxylate bypass and TCA 12 11 1
peptidoglycan recycling I 14 14 1
superpathway of glyoxylate cycle and fatty acid degradation 14 11 1
superpathway of glycolysis, pyruvate dehydrogenase, TCA, and glyoxylate bypass 26 25 1