Experiment set14IT045 for Klebsiella michiganensis M5al

Compare to:

RCH2_defined_noCarbon with Mixed culture; Microbacterium sp. AnTP90 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x

200 most important genes:

  gene name fitness t score description  
BWI76_RS17975 -5.2 -3.4 tail-specific protease compare
BWI76_RS25870 -4.6 -1.3 elongation factor Tu compare
BWI76_RS12090 -4.4 -2.1 HNH endonuclease compare
BWI76_RS08720 -4.3 -2.1 imidazolonepropionase compare
BWI76_RS07985 -4.0 -1.1 fluoride ion transporter CrcB compare
BWI76_RS17980 -3.9 -4.5 RNA chaperone ProQ compare
BWI76_RS09625 -3.8 -1.1 hypothetical protein compare
BWI76_RS05015 -3.5 -1.9 transcriptional regulator compare
BWI76_RS08530 -3.4 -1.4 protein TolA compare
BWI76_RS25920 -3.3 -1.6 peptidylprolyl isomerase compare
BWI76_RS25335 -3.3 -1.6 stringent starvation protein A compare
BWI76_RS20360 -3.2 -0.9 cell division protein DedD compare
BWI76_RS21075 -2.9 -1.4 membrane protein compare
BWI76_RS20150 -2.9 -2.4 NADH:ubiquinone oxidoreductase subunit J compare
BWI76_RS26455 -2.8 -2.1 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase compare
BWI76_RS14770 -2.8 -1.1 PTS IIA 2 domain protein compare
BWI76_RS00965 -2.8 -0.8 acetolactate synthase 2 small subunit compare
BWI76_RS04160 -2.7 -3.1 phosphoserine phosphatase compare
BWI76_RS14620 -2.7 -1.8 acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase compare
BWI76_RS01350 -2.7 -0.7 NAD(P)H-flavin reductase compare
BWI76_RS08535 -2.6 -1.2 translocation protein TolB compare
BWI76_RS14320 -2.6 -2.0 hypothetical protein compare
BWI76_RS22690 -2.6 -2.7 adenylyl-sulfate kinase compare
BWI76_RS08210 -2.6 -1.0 N-acetylglucosamine-6-phosphate deacetylase compare
BWI76_RS21580 -2.6 -1.2 SsrA-binding protein compare
BWI76_RS23265 -2.5 -1.9 hypothetical protein compare
BWI76_RS26620 -2.5 -0.7 Fe-S biogenesis protein NfuA compare
BWI76_RS09670 -2.5 -2.6 recombination factor protein RarA compare
BWI76_RS01115 -2.4 -1.8 dTDP-4-amino-4,6-dideoxygalactose transaminase compare
BWI76_RS04705 -2.4 -4.0 DNA-binding transcriptional regulator FruR compare
BWI76_RS09195 -2.4 -0.9 N-acetyltransferase compare
BWI76_RS21370 -2.3 -0.9 ATP-dependent RNA helicase SrmB compare
BWI76_RS25960 -2.3 -3.1 NUDIX hydrolase compare
BWI76_RS23365 -2.3 -3.9 LysR family transcriptional regulator compare
BWI76_RS18605 -2.2 -1.7 oxidoreductase molybdopterin-binding protein compare
BWI76_RS20355 -2.2 -1.7 colicin V production protein compare
BWI76_RS17300 -2.2 -0.8 tRNA-Tyr compare
BWI76_RS08525 -2.2 -1.8 colicin transporter compare
BWI76_RS00240 -2.2 -1.2 FMN-binding protein MioC compare
BWI76_RS14065 -2.1 -1.8 hypothetical protein compare
BWI76_RS26460 -2.1 -2.7 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
BWI76_RS00875 -2.1 -3.6 DNA-binding transcriptional regulator FabR compare
BWI76_RS11770 -2.1 -1.7 hypothetical protein compare
BWI76_RS21235 -2.1 -0.8 hypothetical protein compare
BWI76_RS00785 -2.1 -4.1 cystathionine gamma-synthase compare
BWI76_RS02785 -2.1 -2.4 AIG2 family protein compare
BWI76_RS08275 -2.1 -1.8 LexA regulated protein compare
BWI76_RS09335 -2.0 -1.0 baseplate assembly protein W compare
BWI76_RS21660 -2.0 -1.2 antirestriction protein compare
BWI76_RS27820 -2.0 -0.7 ilvB operon leader peptide IvbL compare
BWI76_RS23360 -2.0 -1.0 diaminopimelate decarboxylase compare
BWI76_RS00345 -1.9 -3.3 protein disulfide oxidoreductase DsbA compare
BWI76_RS10745 -1.9 -0.7 hypothetical protein compare
BWI76_RS15660 -1.9 -1.6 hypothetical protein compare
BWI76_RS24580 -1.9 -3.5 PTS-dependent dihydroxyacetone kinase operon transcriptional regulator DhaR compare
BWI76_RS25070 -1.9 -1.2 hypothetical protein compare
BWI76_RS09640 -1.9 -1.7 cysteine/glutathione ABC transporter permease/ATP-binding protein CydD compare
BWI76_RS25600 -1.9 -0.7 tRNA-Thr compare
BWI76_RS10465 -1.9 -2.4 hypothetical protein compare
BWI76_RS02530 -1.8 -1.1 tRNA dimethylallyltransferase compare
BWI76_RS05075 -1.8 -0.7 type II secretion system protein GspG compare
BWI76_RS20440 -1.8 -2.5 50S ribosomal protein L3 N(5)-glutamine methyltransferase compare
BWI76_RS09190 -1.8 -1.2 hypothetical protein compare
BWI76_RS11980 -1.8 -1.4 DeoR family transcriptional regulator compare
BWI76_RS15535 -1.8 -2.2 hypothetical protein compare
BWI76_RS21465 -1.7 -2.6 bifunctional chorismate mutase/prephenate dehydratase compare
BWI76_RS15825 -1.7 -0.8 hypothetical protein compare
BWI76_RS00180 -1.7 -0.7 F0F1 ATP synthase subunit epsilon compare
BWI76_RS21070 -1.7 -1.0 outer membrane protein assembly factor BamB compare
BWI76_RS13490 -1.7 -2.3 pyrimidine-specific ribonucleoside hydrolase RihA compare
BWI76_RS16480 -1.7 -1.1 lactoylglutathione lyase compare
BWI76_RS15195 -1.7 -1.3 DUF4186 domain-containing protein compare
BWI76_RS02815 -1.7 -1.1 fructose-bisphosphatase class I compare
BWI76_RS10950 -1.6 -1.7 MFS transporter compare
BWI76_RS16425 -1.6 -2.5 hypothetical protein compare
BWI76_RS16200 -1.6 -1.2 NAD(P) transhydrogenase subunit beta compare
BWI76_RS23580 -1.6 -1.6 hypothetical protein compare
BWI76_RS18870 -1.6 -1.6 protein NifZ compare
BWI76_RS24080 -1.6 -1.4 DUF179 domain-containing protein compare
BWI76_RS24600 -1.6 -1.9 dihydroxyacetone kinase compare
BWI76_RS08605 -1.6 -1.2 phosphoglyceromutase compare
BWI76_RS22090 -1.6 -1.4 transcriptional regulator compare
BWI76_RS08520 -1.5 -1.1 colicin transporter TolQ compare
BWI76_RS17530 -1.5 -2.1 hypothetical protein compare
BWI76_RS15530 -1.5 -2.6 hypothetical protein compare
BWI76_RS11205 -1.5 -2.1 transcription-repair coupling factor compare
BWI76_RS26095 -1.5 -0.6 shikimate kinase compare
BWI76_RS26390 -1.5 -4.7 cell division protein FtsX compare
BWI76_RS00845 -1.5 -5.1 N-acetyl-gamma-glutamyl-phosphate reductase compare
BWI76_RS24900 -1.5 -0.8 DeoR family transcriptional regulator compare
BWI76_RS04305 -1.5 -0.8 molecular chaperone DnaJ compare
BWI76_RS01630 -1.5 -0.8 16S ribosomal RNA compare
BWI76_RS21565 -1.5 -0.7 outer membrane protein assembly factor BamE compare
BWI76_RS16375 -1.5 -1.5 electron transport complex subunit G compare
BWI76_RS27440 -1.5 -1.0 DNA helicase RecG compare
BWI76_RS14625 -1.5 -1.3 protein TolA compare
BWI76_RS18925 -1.5 -4.2 histidinol dehydrogenase compare
BWI76_RS03660 -1.5 -2.2 hypothetical protein compare
BWI76_RS07820 -1.5 -1.5 S-methyl-5-thioribose kinase compare
BWI76_RS00060 -1.5 -1.4 N-acetylneuraminate lyase compare
BWI76_RS04470 -1.5 -4.7 carbamoyl phosphate synthase large subunit compare
BWI76_RS01385 -1.5 -1.4 potassium transporter compare
BWI76_RS25115 -1.4 -4.8 argininosuccinate synthase compare
BWI76_RS04645 -1.4 -1.9 3-dehydroquinase compare
BWI76_RS00755 -1.4 -1.1 ATP-dependent protease subunit HslV compare
BWI76_RS13545 -1.4 -0.9 N-acetyltransferase compare
BWI76_RS18430 -1.4 -1.9 hypothetical protein compare
BWI76_RS15605 -1.4 -1.9 hypothetical protein compare
BWI76_RS25425 -1.4 -0.7 arginine repressor compare
BWI76_RS15110 -1.4 -3.6 putative excinuclease ABC subunit A compare
BWI76_RS14935 -1.4 -0.9 NIPSNAP family containing protein compare
BWI76_RS07465 -1.4 -1.0 TetR family transcriptional regulator compare
BWI76_RS05450 -1.4 -0.5 ribonuclease HI compare
BWI76_RS00975 -1.4 -6.8 dihydroxy-acid dehydratase compare
BWI76_RS26395 -1.4 -3.7 cell division protein FtsE compare
BWI76_RS07070 -1.4 -2.2 5-(carboxyamino)imidazole ribonucleotide mutase compare
BWI76_RS25060 -1.3 -3.5 lipoprotein NlpI compare
BWI76_RS12335 -1.3 -3.8 hypothetical protein compare
BWI76_RS12240 -1.3 -5.0 terminase small subunit compare
BWI76_RS12400 -1.3 -3.5 TetR family transcriptional regulator compare
BWI76_RS09420 -1.3 -1.1 hypothetical protein compare
BWI76_RS19705 -1.3 -3.1 kinase compare
BWI76_RS03345 -1.3 -6.2 prophage P4 integrase compare
BWI76_RS17720 -1.3 -0.3 muramoyltetrapeptide carboxypeptidase compare
BWI76_RS15680 -1.3 -3.6 hypothetical protein compare
BWI76_RS09025 -1.3 -1.7 GntR family transcriptional regulator compare
BWI76_RS24605 -1.3 -3.5 dihydroxyacetone kinase subunit DhaM compare
BWI76_RS15760 -1.3 -1.3 hypothetical protein compare
BWI76_RS14915 -1.3 -2.0 hypothetical protein compare
BWI76_RS11840 -1.3 -2.8 tryptophan synthase subunit alpha compare
BWI76_RS21100 -1.3 -1.2 nucleoside-diphosphate kinase compare
BWI76_RS21475 -1.3 -1.4 bifunctional chorismate mutase/prephenate dehydrogenase compare
BWI76_RS21350 -1.2 -1.5 anti-RNA polymerase sigma factor SigE compare
BWI76_RS00805 -1.2 -2.4 5,10-methylenetetrahydrofolate reductase compare
BWI76_RS07640 -1.2 -1.4 short chain dehydrogenase compare
BWI76_RS22760 -1.2 -3.2 sulfite reductase subunit beta compare
BWI76_RS23920 -1.2 -1.1 D-3-phosphoglycerate dehydrogenase compare
BWI76_RS09255 -1.2 -1.9 hypothetical protein compare
BWI76_RS05840 -1.2 -1.4 glutamate 5-kinase compare
BWI76_RS15400 -1.2 -3.3 anti-RssB factor compare
BWI76_RS18940 -1.2 -2.8 imidazole glycerol phosphate synthase subunit HisH compare
BWI76_RS12170 -1.2 -1.9 hypothetical protein compare
BWI76_RS17405 -1.2 -1.8 cation transport regulator compare
BWI76_RS20510 -1.2 -2.7 glucokinase compare
BWI76_RS20475 -1.2 -2.3 phospholipid-binding lipoprotein MlaA compare
BWI76_RS10935 -1.2 -2.4 glucan biosynthesis glucosyltransferase H compare
BWI76_RS08385 -1.2 -1.6 citrate (Si)-synthase compare
BWI76_RS10625 -1.2 -4.7 hypothetical protein compare
BWI76_RS01185 -1.2 -0.8 adenylate cyclase compare
BWI76_RS04670 -1.2 -5.3 3-isopropylmalate dehydratase large subunit compare
BWI76_RS04240 -1.2 -1.5 thr operon leader peptide compare
BWI76_RS04675 -1.2 -2.4 3-isopropylmalate dehydrogenase compare
BWI76_RS06030 -1.2 -2.4 homocysteine S-methyltransferase compare
BWI76_RS06535 -1.2 -2.0 endopeptidase La compare
BWI76_RS04250 -1.2 -3.7 homoserine kinase compare
BWI76_RS09530 -1.1 -0.9 hypothetical protein compare
BWI76_RS04270 -1.1 -2.6 transaldolase compare
BWI76_RS22475 -1.1 -1.4 heme ABC transporter ATP-binding protein compare
BWI76_RS20190 -1.1 -2.9 NADH-quinone oxidoreductase subunit A compare
BWI76_RS18950 -1.1 -1.9 imidazole glycerol phosphate synthase cyclase subunit compare
BWI76_RS20785 -1.1 -0.8 ethanolamine utilization protein EutJ compare
BWI76_RS02610 -1.1 -2.0 transcriptional regulator compare
BWI76_RS12195 -1.1 -1.7 hypothetical protein compare
BWI76_RS14390 -1.1 -0.5 hypothetical protein compare
BWI76_RS27600 -1.1 -2.4 tRNA-Sec compare
BWI76_RS01125 -1.1 -2.1 4-alpha-L-fucosyltransferase compare
BWI76_RS12215 -1.1 -2.5 HNH endonuclease compare
BWI76_RS15715 -1.1 -1.9 putative ninG protein compare
BWI76_RS01080 -1.1 -3.6 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase compare
BWI76_RS21715 -1.1 -1.4 transcriptional regulator compare
BWI76_RS04685 -1.1 -3.9 putative leucine operon leader peptide compare
BWI76_RS18955 -1.1 -2.4 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase compare
BWI76_RS06765 -1.1 -1.9 transcriptional regulator compare
BWI76_RS01655 -1.1 -4.5 homoserine O-succinyltransferase compare
BWI76_RS00855 -1.1 -3.2 argininosuccinate lyase compare
BWI76_RS17310 -1.1 -1.4 AsnC family transcriptional regulator compare
BWI76_RS12270 -1.1 -2.9 hypothetical protein compare
BWI76_RS20160 -1.1 -1.9 NADH-quinone oxidoreductase subunit H compare
BWI76_RS22765 -1.1 -4.2 sulfite reductase subunit alpha compare
BWI76_RS00400 -1.1 -0.5 glutamine synthetase compare
BWI76_RS16965 -1.1 -1.6 murein lipoprotein compare
BWI76_RS15645 -1.1 -3.2 gp6 compare
BWI76_RS26775 -1.1 -2.5 endo-1,4-D-glucanase compare
BWI76_RS01220 -1.1 -2.2 DNA-dependent helicase II compare
BWI76_RS12320 -1.1 -4.6 hypothetical protein compare
BWI76_RS19205 -1.0 -1.2 putative proline iminopeptidase compare
BWI76_RS18695 -1.0 -1.8 GntR family transcriptional regulator compare
BWI76_RS14570 -1.0 -1.6 hypothetical protein compare
BWI76_RS00835 -1.0 -4.6 phosphoenolpyruvate carboxylase compare
BWI76_RS16010 -1.0 -2.9 hypothetical protein compare
BWI76_RS09030 -1.0 -2.3 transpeptidase compare
BWI76_RS00760 -1.0 -2.4 cell division protein FtsN compare
BWI76_RS04255 -1.0 -3.2 threonine synthase compare
BWI76_RS01200 -1.0 -0.6 diaminopimelate epimerase compare
BWI76_RS18745 -1.0 -1.9 adenosylhomocysteinase compare
BWI76_RS20710 -1.0 -2.2 dyp-type peroxidase family protein compare
BWI76_RS01380 -1.0 -1.4 YigZ family protein compare
BWI76_RS03010 -1.0 -3.9 ornithine carbamoyltransferase compare
BWI76_RS00990 -1.0 -4.0 ketol-acid reductoisomerase compare
BWI76_RS01800 -1.0 -1.4 glucose-6-phosphate isomerase compare


Specific Phenotypes

None in this experiment

For Klebsiella michiganensis M5al in mixed community experiments

For mixed community Mixed culture; Microbacterium sp. AnTP90 3:1 starting OD to Klebsiella across organisms