Experiment set14IT045 for Klebsiella michiganensis M5al

Compare to:

RCH2_defined_noCarbon with Mixed culture; Microbacterium sp. AnTP90 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x

200 most detrimental genes:

  gene name fitness t score description  
BWI76_RS27430 +2.0 0.7 (p)ppGpp synthetase compare
BWI76_RS11430 +2.0 1.8 lipoprotein compare
BWI76_RS23560 +1.8 1.8 hypothetical protein compare
BWI76_RS11435 +1.7 2.8 hypothetical protein compare
BWI76_RS17400 +1.6 2.0 transporter compare
BWI76_RS11810 +1.6 2.2 outer membrane protein OmpW compare
BWI76_RS17770 +1.4 2.2 isomerase/hydrolase compare
BWI76_RS11610 +1.4 2.0 glutamate dehydrogenase compare
BWI76_RS13445 +1.4 1.6 alpha/beta hydrolase compare
BWI76_RS06405 +1.4 2.3 2-dehydropantoate 2-reductase compare
BWI76_RS13435 +1.4 1.5 hypothetical protein compare
BWI76_RS07255 +1.3 2.0 hypothetical protein compare
BWI76_RS09130 +1.3 3.2 biofilm formation regulatory protein BssR compare
BWI76_RS07475 +1.3 2.0 DNA-binding transcriptional regulator RamA compare
BWI76_RS05810 +1.3 1.5 hypothetical protein compare
BWI76_RS24035 +1.2 4.5 hypothetical protein compare
BWI76_RS21505 +1.2 1.6 hypothetical protein compare
BWI76_RS11750 +1.2 3.2 chitooligosaccharide deacetylase compare
BWI76_RS21375 +1.2 1.0 autonomous glycyl radical cofactor GrcA compare
BWI76_RS11675 +1.2 2.9 arginine N-succinyltransferase compare
BWI76_RS03045 +1.2 1.8 hypothetical protein compare
BWI76_RS15975 +1.2 0.9 hypothetical protein compare
BWI76_RS14805 +1.2 2.7 hypothetical protein compare
BWI76_RS11790 +1.2 2.6 acyl-CoA thioesterase compare
BWI76_RS19310 +1.2 2.9 ABC transporter permease compare
BWI76_RS12825 +1.1 2.7 hypothetical protein compare
BWI76_RS14775 +1.1 1.6 creatinine amidohydrolase compare
BWI76_RS20230 +1.1 1.5 hypothetical protein compare
BWI76_RS23190 +1.1 3.1 propanediol utilization protein PduU compare
BWI76_RS23705 +1.1 2.4 2-deoxy-D-ribonyl-CoA 3-dehydrogenase (from data) compare
BWI76_RS13320 +1.1 2.4 putative LpxA-like enzyme compare
BWI76_RS23895 +1.1 0.8 Xaa-Pro aminopeptidase compare
BWI76_RS13480 +1.1 1.0 XRE family transcriptional regulator compare
BWI76_RS12780 +1.1 2.4 hypothetical protein compare
BWI76_RS22935 +1.1 1.8 L-fucose mutarotase compare
BWI76_RS00865 +1.1 2.8 DNA-binding transcriptional regulator OxyR compare
BWI76_RS23250 +1.0 1.6 hypothetical protein compare
BWI76_RS12910 +1.0 1.9 3,4-dihydroxyphenylacetate 2,3-dioxygenase compare
BWI76_RS15030 +1.0 2.4 ABC transporter compare
BWI76_RS15735 +1.0 2.1 hypothetical protein compare
BWI76_RS16590 +1.0 2.2 short-chain dehydrogenase compare
BWI76_RS13850 +1.0 4.1 N-acetyltransferase compare
BWI76_RS07730 +1.0 0.6 iron-enterobactin transporter membrane protein compare
BWI76_RS10585 +1.0 2.4 amino acid ABC transporter ATP-binding protein compare
BWI76_RS00375 +1.0 1.8 hypothetical protein compare
BWI76_RS19935 +1.0 1.4 hypothetical protein compare
BWI76_RS12865 +1.0 2.5 acetylornithine deacetylase compare
BWI76_RS16170 +1.0 3.4 amidohydrolase compare
BWI76_RS03015 +1.0 2.1 RNase E inhibitor protein compare
BWI76_RS01895 +1.0 2.3 cupin compare
BWI76_RS12460 +1.0 1.0 envelope stress response membrane protein PspC compare
BWI76_RS09015 +0.9 3.9 aldo/keto reductase compare
BWI76_RS03105 +0.9 0.9 myo-inosose-2 dehydratase compare
BWI76_RS05895 +0.9 2.9 phosphonate ABC transporter, permease protein PhnE compare
BWI76_RS06910 +0.9 1.7 transcriptional regulator compare
BWI76_RS09135 +0.9 2.5 oxidoreductase compare
BWI76_RS24810 +0.9 2.7 hypothetical protein compare
BWI76_RS21130 +0.9 1.9 Fe-S assembly protein IscX compare
BWI76_RS16870 +0.9 2.2 LysR family transcriptional regulator compare
BWI76_RS16360 +0.9 0.9 electron transport complex subunit RsxB compare
BWI76_RS23885 +0.9 0.8 2-octaprenylphenol hydroxylase compare
BWI76_RS11515 +0.9 1.5 peptide-methionine (R)-S-oxide reductase compare
BWI76_RS06120 +0.9 1.3 membrane protein compare
BWI76_RS02745 +0.9 0.9 hypothetical protein compare
BWI76_RS18130 +0.9 2.3 zinc ABC transporter substrate-binding protein compare
BWI76_RS19460 +0.9 1.1 lipoprotein compare
BWI76_RS23195 +0.9 2.2 ethanolamine utilization protein EutP compare
BWI76_RS23455 +0.9 2.0 Na(+)-translocating NADH-quinone reductase subunit E compare
BWI76_RS08765 +0.9 1.8 8-amino-7-oxononanoate synthase compare
BWI76_RS01840 +0.9 2.7 maltose ABC transporter, ATPase component (MalK) (from data) compare
BWI76_RS19985 +0.9 1.5 MFS transporter compare
BWI76_RS19495 +0.9 0.8 ABC transporter, quaternary amine uptake transporter (QAT) family, ATP-binding protein compare
BWI76_RS14930 +0.9 1.6 hypothetical protein compare
BWI76_RS15185 +0.9 2.1 N-acetyltransferase compare
BWI76_RS15215 +0.9 0.6 N-acetyltransferase compare
BWI76_RS06435 +0.9 2.3 MFS transporter compare
BWI76_RS03515 +0.9 3.3 hypothetical protein compare
BWI76_RS11815 +0.9 0.9 hypothetical protein compare
BWI76_RS13805 +0.9 2.2 inorganic diphosphatase compare
BWI76_RS17190 +0.9 1.2 TonB system transport protein TonB compare
BWI76_RS22980 +0.9 3.3 murein transglycosylase A compare
BWI76_RS02255 +0.9 1.4 chaperone-modulator protein CbpM compare
BWI76_RS09490 +0.8 2.3 DNA-binding response regulator compare
BWI76_RS27940 +0.8 1.1 2-dehydro-3-deoxy-6-phosphogalactonate aldolase compare
BWI76_RS07645 +0.8 1.2 short-chain dehydrogenase/reductase compare
BWI76_RS06015 +0.8 1.2 hypothetical protein compare
BWI76_RS04840 +0.8 1.5 prepilin peptidase-dependent pilin compare
BWI76_RS15890 +0.8 2.5 Zn-dependent oxidoreductase compare
BWI76_RS20930 +0.8 1.8 arsenate reductase (glutaredoxin) compare
BWI76_RS18005 +0.8 2.3 hypothetical protein compare
BWI76_RS13505 +0.8 2.0 putative receptor compare
BWI76_RS27635 +0.8 3.1 AraC family transcriptional regulator compare
BWI76_RS08380 +0.8 0.7 endonuclease VIII compare
BWI76_RS00640 +0.8 2.2 L-rhamnose mutarotase compare
BWI76_RS08315 +0.8 1.8 K+-transporting ATPase subunit B compare
BWI76_RS06735 +0.8 1.5 50S ribosomal protein L31 compare
BWI76_RS10550 +0.8 2.7 AtzE family amidohydrolase compare
BWI76_RS14970 +0.8 1.1 pyrroline-5-carboxylate reductase compare
BWI76_RS24370 +0.8 3.4 hypothetical protein compare
BWI76_RS03740 +0.8 2.7 hypothetical protein compare
BWI76_RS09520 +0.8 1.0 arginine ABC transporter ATP-binding protein ArtP compare
BWI76_RS13215 +0.8 1.1 type I glyceraldehyde-3-phosphate dehydrogenase compare
BWI76_RS11640 +0.8 2.4 ABC transporter membrane protein compare
BWI76_RS12940 +0.8 1.6 AraC family transcriptional regulator compare
BWI76_RS26630 +0.8 2.1 pimeloyl-[acyl-carrier protein] methyl ester esterase compare
BWI76_RS03040 +0.8 2.4 leucyl aminopeptidase compare
BWI76_RS16925 +0.8 2.7 3-(3-hydroxyphenyl)propionate hydroxylase compare
BWI76_RS12475 +0.8 3.7 hypothetical protein compare
BWI76_RS18575 +0.8 1.0 transcriptional regulator compare
BWI76_RS10725 +0.8 1.8 hypothetical protein compare
BWI76_RS17370 +0.8 1.2 nitrate transporter NasD compare
BWI76_RS19750 +0.8 1.8 elongation factor P-like protein YeiP compare
BWI76_RS07595 +0.8 1.6 putative oxidoreductase compare
BWI76_RS04960 +0.8 3.3 carbonate dehydratase compare
BWI76_RS05640 +0.8 1.5 GntR family transcriptional regulator compare
BWI76_RS05010 +0.8 2.1 tRNA glutamyl-Q synthetase compare
BWI76_RS24155 +0.8 2.5 A/G-specific adenine glycosylase compare
BWI76_RS19230 +0.8 1.7 polar amino acid ABC transporter inner membrane subunit compare
BWI76_RS13730 +0.8 1.6 hypothetical protein compare
BWI76_RS11680 +0.8 1.8 succinylglutamate-semialdehyde dehydrogenase compare
BWI76_RS21905 +0.8 2.1 class II aldolase compare
BWI76_RS07165 +0.8 1.7 hypothetical protein compare
BWI76_RS07530 +0.8 3.0 binding-protein-dependent transport system inner membrane protein compare
BWI76_RS26405 +0.8 1.2 16S rRNA (guanine(966)-N(2))-methyltransferase compare
BWI76_RS18335 +0.8 4.1 DNA-binding response regulator compare
BWI76_RS12620 +0.8 2.9 2-nitropropane dioxygenase compare
BWI76_RS07740 +0.8 0.9 Fe2+-enterobactin ABC transporter substrate-binding protein compare
BWI76_RS10750 +0.8 2.1 pyrimidine utilization transport protein G compare
BWI76_RS16795 +0.8 0.9 amino acid ABC transporter ATPase compare
BWI76_RS17930 +0.8 2.8 cold-shock protein CspC compare
BWI76_RS14985 +0.8 2.9 amino acid ABC transporter substrate-binding protein compare
BWI76_RS13880 +0.8 1.2 lysine transporter LysE compare
BWI76_RS18820 +0.8 2.2 nitrogenase molybdenum-iron protein subunit beta compare
BWI76_RS17325 +0.8 2.0 nitrate reductase molybdenum cofactor assembly chaperone compare
BWI76_RS19445 +0.7 3.6 hypothetical protein compare
BWI76_RS27650 +0.7 2.3 EamA family transporter compare
BWI76_RS26440 +0.7 0.8 hypothetical protein compare
BWI76_RS14040 +0.7 2.0 thiaminase compare
BWI76_RS19330 +0.7 0.5 HAD family hydrolase compare
BWI76_RS12625 +0.7 2.9 isoflavone reductase compare
BWI76_RS22450 +0.7 1.0 selenoprotein W-related protein compare
BWI76_RS18080 +0.7 1.8 protein YebE compare
BWI76_RS24955 +0.7 1.7 hypothetical protein compare
BWI76_RS05235 +0.7 0.6 hypothetical protein compare
BWI76_RS25485 +0.7 1.1 septum formation protein Maf compare
BWI76_RS15925 +0.7 2.5 dimethyl sulfoxide reductase subunit A compare
BWI76_RS23255 +0.7 2.6 prepilin-type cleavage/methylation domain-containing protein compare
BWI76_RS13625 +0.7 1.6 hypothetical protein compare
BWI76_RS19540 +0.7 2.5 multidrug transporter permease compare
BWI76_RS01775 +0.7 0.9 hypothetical protein compare
BWI76_RS22210 +0.7 2.9 murein transglycosylase B compare
BWI76_RS01585 +0.7 1.9 transcriptional regulator compare
BWI76_RS19360 +0.7 1.5 glucose dehydrogenase compare
BWI76_RS16080 +0.7 2.9 LysR family transcriptional regulator compare
BWI76_RS23005 +0.7 1.9 bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase compare
BWI76_RS14045 +0.7 2.4 oxidoreductase compare
BWI76_RS13205 +0.7 2.2 hypothetical protein compare
BWI76_RS15150 +0.7 1.8 outer membrane efflux protein compare
BWI76_RS03615 +0.7 3.0 putative transcriptional regulatory protein compare
BWI76_RS13630 +0.7 2.0 ABC transporter compare
BWI76_RS01725 +0.7 3.5 PTS mannose/fructose/sorbose family transporter subunit IID compare
BWI76_RS23760 +0.7 1.0 tRNA-Gly compare
BWI76_RS02585 +0.7 2.1 hypothetical protein compare
BWI76_RS16900 +0.7 1.2 4-hydroxy-2-oxovalerate aldolase compare
BWI76_RS00270 +0.7 2.3 D-ribose pyranase (EC 5.4.99.62) (from data) compare
BWI76_RS07790 +0.7 1.3 plasmid stabilization protein compare
BWI76_RS14825 +0.7 0.9 dienelactone hydrolase family protein compare
BWI76_RS10490 +0.7 2.0 vanillate O-demethylase oxygenase subunit compare
BWI76_RS18730 +0.7 1.9 LysR family transcriptional regulator compare
BWI76_RS24180 +0.7 1.3 hypothetical protein compare
BWI76_RS15950 +0.7 0.8 dethiobiotin synthase compare
BWI76_RS13560 +0.7 0.5 amino acid ABC transporter substrate-binding subunit compare
BWI76_RS14840 +0.7 1.2 hypothetical protein compare
BWI76_RS00140 +0.7 0.8 phosphate transport system regulator PhoU compare
BWI76_RS06475 +0.7 0.7 protoheme IX farnesyltransferase compare
BWI76_RS19700 +0.7 1.2 deoxyribonuclease IV compare
BWI76_RS23340 +0.7 1.5 transcriptional regulator compare
BWI76_RS11950 +0.7 2.1 phosphatidylglycerophosphatase B compare
BWI76_RS14550 +0.7 1.6 2,3-dihydroxybenzoate-AMP ligase compare
BWI76_RS27780 +0.7 1.2 hypothetical protein compare
BWI76_RS24350 +0.7 1.1 quinol monooxygenase compare
BWI76_RS23810 +0.7 1.9 bifunctional protein-disulfide isomerase/oxidoreductase DsbC compare
BWI76_RS26875 +0.7 1.2 dipeptide ABC transporter permease DppC compare
BWI76_RS02720 +0.7 4.2 NAD(P)-dependent oxidoreductase compare
BWI76_RS22100 +0.7 1.4 multidrug effux MFS transporter subunit EmrB compare
BWI76_RS12870 +0.7 1.2 putative phytanoyl-CoA dioxygenase compare
BWI76_RS24010 +0.7 4.5 hypothetical protein compare
BWI76_RS10640 +0.7 1.4 AraC family transcriptional regulator compare
BWI76_RS26145 +0.7 1.7 heat-shock protein Hsp15 compare
BWI76_RS21245 +0.7 1.5 nitrogen regulatory protein P-II compare
BWI76_RS01620 +0.7 2.1 hypothetical protein compare
BWI76_RS11150 +0.7 0.8 membrane protein compare
BWI76_RS23505 +0.7 5.2 ferrous iron transporter B compare
BWI76_RS06465 +0.7 1.0 IclR family transcriptional regulator compare
BWI76_RS14035 +0.7 1.1 ABC transporter ATPase compare
BWI76_RS16810 +0.7 3.0 RpiR family transcriptional regulator compare
BWI76_RS19695 +0.7 1.3 membrane protein compare
BWI76_RS03715 +0.7 3.7 hypothetical protein compare
BWI76_RS03120 +0.7 3.3 ABC transporter ATP-binding protein compare
BWI76_RS06880 +0.7 1.1 biopolymer transport protein ExbD/TolR compare


Specific Phenotypes

None in this experiment

For Klebsiella michiganensis M5al in mixed community experiments

For mixed community Mixed culture; Microbacterium sp. AnTP90 3:1 starting OD to Klebsiella across organisms