Experiment set14IT044 for Sinorhizobium meliloti 1021

Compare to:

Mannobiose carbon source

200 most important genes:

  gene name fitness t score description  
SMc00236 -8.7 -6.0 Indole-3-glycerol phosphate synthase compare
SMc02766 -8.3 -11.4 tryptophan synthase subunit beta compare
SMc04405 -8.1 -5.6 3-isopropylmalate dehydrogenase compare
SMc02767 -8.0 -7.8 N-(5'-phosphoribosyl)anthranilate isomerase compare
SMc02899 -7.9 -7.7 prephenate dehydratase compare
SMc01054 -7.8 -5.4 required for sulfate utilization, putative electron source for sulfite reductase CysI (from data) compare
SM_b21175 -7.7 -5.3 phosphate uptake ABC transporter permease compare
SMc02717 -7.6 -5.3 2-isopropylmalate synthase compare
SMc04002 -7.5 -8.9 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
SMc01494 -7.4 -12.9 phosphoserine phosphatase compare
SMc02245 -7.3 -5.1 dihydroorotate dehydrogenase 2 compare
SMc03797 -7.3 -11.2 homoserine O-succinyltransferase compare
SMc00918 -7.2 -7.1 ATP phosphoribosyltransferase regulatory subunit compare
SMc00235 -7.0 -8.4 anthranilate phosphoribosyltransferase compare
SMc00614 -7.0 -6.8 phosphoribosylglycinamide formyltransferase compare
SMc00640 -7.0 -8.3 phosphoserine aminotransferase compare
SMc02572 -7.0 -5.6 imidazole glycerol phosphate synthase subunit HisH compare
SMc00488 -6.9 -16.8 phosphoribosylformylglycinamidine synthase II compare
SMc00993 -6.9 -9.5 phosphoribosylamine--glycine ligase compare
SMc04045 -6.7 -9.2 dihydroxy-acid dehydratase compare
SMc03111 -6.6 -9.1 mannose 6-phosphate isomerase (EC 5.3.1.8) (from data) compare
SMc01431 -6.6 -13.4 acetolactate synthase 3 catalytic subunit compare
SMc04028 -6.5 -18.4 glutamate synthase compare
SMc00494 -6.5 -2.5 phosphoribosylformylglycinamidine synthase subunit PurS compare
SMc01843 -6.5 -13.1 5,10-methylenetetrahydrofolate reductase compare
SMc03823 -6.4 -11.4 isopropylmalate isomerase large subunit compare
SMc00615 -6.4 -9.2 phosphoribosylaminoimidazole synthetase compare
SMc02725 -6.4 -14.9 anthranilate synthase compare
SMc02217 -6.3 -7.6 O-succinylhomoserine sulfhydrylase compare
SMc02765 -6.3 -11.1 tryptophan synthase subunit alpha compare
SMc00131 -6.3 -14.0 transcriptional regulator compare
SMa1635 -6.3 -2.5 hypothetical protein compare
SMc00711 -6.3 -6.1 cyclohexadienyl dehydrogenase compare
SMc00092 -6.2 -13.3 phosphoadenosine phosphosulfate reductase compare
SMc03895 -6.2 -17.9 pyruvate carboxylase compare
SMc00554 -6.2 -7.3 amidophosphoribosyltransferase compare
SMc01004 -6.1 -11.1 phosphoribosyl-AMP cyclohydrolase compare
SMc03112 -6.0 -17.4 B12-dependent methionine synthase compare
SMc04026 -6.0 -9.8 glutamate synthase compare
SMc00493 -6.0 -7.1 phosphoribosylformylglycinamidine synthase I compare
SMc01801 -6.0 -4.0 N-acetylglutamylphosphate reductase (EC 1.2.1.38) (from data) compare
SMc02124 -5.9 -15.8 nitrite reductase compare
SMc00815 -5.8 -3.9 inosine 5'-monophosphate dehydrogenase compare
SMc03109 -5.7 -11.1 Mannokinase (EC 2.7.1.7) (from data) compare
SMc01360 -5.7 -3.9 aspartate carbamoyltransferase catalytic subunit compare
SMc02569 -5.6 -4.9 imidazole glycerol phosphate synthase subunit HisF compare
SMc03763 -5.5 -3.8 cytosine-specific methyltransferase compare
SMc00876 -5.5 -6.5 ATP-binding MRP protein compare
SMc00293 -5.4 -12.2 homoserine dehydrogenase compare
SMc02707 -5.4 -7.1 hypothetical protein compare
SMc00917 -5.4 -6.2 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) compare
SMc03776 -5.4 -3.7 gamma-glutamyl kinase compare
SMc00090 -5.1 -11.1 sulfate adenylyltransferase compare
SMc04001 -5.0 -2.0 phosphoribosylaminoimidazole carboxylase catalytic subunit protein compare
SMc01881 -5.0 -5.9 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
SMc02755 -5.0 -8.3 S-adenosyl-L-homocysteine hydrolase compare
SMc04088 -5.0 -8.7 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
SMc00495 -5.0 -4.8 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
SMc01361 -4.9 -5.9 dihydroorotase compare
SMc01726 -4.9 -6.2 acetylglutamate kinase compare
SM_b21174 -4.9 -6.3 phosphate uptake ABC transporter permease compare
SMc02166 -4.9 -11.6 dihydroorotase compare
SMc02123 -4.8 -5.3 required for sulfate utilization, putative electron transport protein for sulfite reductase (from data) compare
SMc02137 -4.7 -4.6 ornithine carbamoyltransferase compare
SMc04255 -4.7 -18.3 beta-mannosidase conserved
SMc00091 -4.7 -14.0 sulfate adenylyltransferase compare
SMc02570 -4.7 -4.9 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
SMc02574 -4.6 -7.0 imidazoleglycerol-phosphate dehydratase compare
SMc00412 -4.6 -5.4 orotidine 5'-phosphate decarboxylase compare
SMc03979 -4.5 -4.4 glyceraldehyde-3-phosphate dehydrogenase compare
SMc02307 -4.4 -9.5 histidinol dehydrogenase compare
SMc03070 -4.3 -9.0 glucose-6-phosphate 1-dehydrogenase compare
SM_b21177 -4.3 -7.1 phosphate uptake ABC transporter ATP-binding protein compare
SMc03795 -4.3 -2.3 isopropylmalate isomerase small subunit compare
SMc02165 -4.2 -9.0 orotate phosphoribosyltransferase compare
SMc03826 -4.2 -2.9 argininosuccinate synthase compare
SM_b21176 -4.1 -5.0 phosphate uptake ABC transporter substrate-binding protein precursor compare
SMc01880 -4.1 -3.9 pantoate--beta-alanine ligase compare
SMc01770 -4.0 -1.7 serine hydroxymethyltransferase compare
SMc02246 -4.0 -1.6 hypothetical protein compare
SMc04346 -4.0 -4.9 ketol-acid reductoisomerase compare
SMc03978 -3.8 -2.6 transketolase compare
SMc00017 -3.8 -2.0 homoserine kinase compare
SMc01053 -3.8 -5.7 siroheme synthase compare
SMc03777 -3.8 -7.3 gamma-glutamyl phosphate reductase compare
SMc04257 -3.8 -11.4 ABC transporter for D-Cellobiose and D-Salicin, permease component 1 (from data) conserved
SMc03981 -3.7 -5.9 phosphoglycerate kinase compare
SMc01430 -3.7 -6.1 acetolactate synthase 3 regulatory subunit compare
SMc02138 -3.6 -5.3 acetylornithine transaminase compare
SMc00294 -3.6 -10.2 aminotransferase compare
SMc04256 -3.6 -13.6 ABC transporter for D-Cellobiose and D-Salicin, ATPase component (from data) conserved
SMc01215 -3.5 -2.4 carbamoyl phosphate synthase large subunit compare
SMc00641 -3.2 -5.1 D-3-phosphoglycerate dehydrogenase compare
SMc01206 -3.1 -2.9 queuine tRNA-ribosyltransferase compare
SMc04258 -3.1 -10.9 ABC transporter for D-Cellobiose and D-Salicin, permease component 2 (from data) conserved
SMc01207 -3.0 -4.2 S-adenosylmethionine--tRNA ribosyltransferase-isomerase compare
SMc04259 -2.9 -5.3 ABC transporter for D-Cellobiose and D-Salicin, periplasmic substrate-binding protein (from data) conserved
SMc03229 -2.9 -2.1 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase compare
SMc01578 -2.9 -15.1 aspartate aminotransferase compare
SMc01124 -2.9 -8.4 PII uridylyl-transferase compare
SMc02425 -2.8 -5.6 transcriptional regulator compare
SMc02983 -2.6 -8.2 ornithine, DAP, or arginine decarboxylase compare
SMc03068 -2.5 -12.7 phosphogluconate dehydratase compare
SMc01028 -2.3 -11.1 phosphopyruvate hydratase compare
SMc03849 -2.2 -1.4 heme exporter C (cytochrome C-type biogenesis protein) transmembrane compare
SMc00010 -2.2 -2.1 cytochrome C oxidase polypeptide I transmembrane protein compare
SMc04005 -2.2 -7.8 pyruvate kinase compare
SMc02838 -2.1 -6.3 phosphoglyceromutase compare
SMc01569 -2.1 -1.4 carbamoyl phosphate synthase small subunit compare
SMc02978 -2.0 -6.4 hypothetical protein compare
SMc02141 -2.0 -4.2 phosphate transporter PhoU compare
SMc02055 -2.0 -2.3 phytoene synthase compare
SMc01440 -1.9 -6.5 hydrolase serine protease transmembrane protein compare
SMc03110 -1.8 -5.0 hypothetical protein compare
SMc01441 -1.8 -4.8 membrane bound protease compare
SMc01850 -1.7 -3.3 hypothetical protein compare
SMc02140 -1.6 -2.7 phosphate regulon transcriptional regulatory protein compare
SMc00450 -1.6 -3.4 protoheme IX farnesyltransferase compare
SMc00726 -1.6 -1.0 thiol:disulfide interchange redox-active center transmembrane protein compare
SMc03153 -1.6 -3.2 keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase compare
SMc00619 -1.6 -2.1 hypothetical protein compare
SMc02434 -1.6 -2.9 hypothetical protein compare
SMc00334 -1.6 -1.9 cytidylate kinase compare
SMc03850 -1.6 -1.4 heme exporter D (cytochrome C-type biogenesis protein) transmembrane compare
SMc02812 -1.5 -2.4 hypothetical protein compare
SMc03069 -1.5 -3.4 6-phosphogluconolactonase compare
SMc04245 -1.5 -7.7 high-affinity zinc uptake system ABC transporter protein compare
SMc00882 -1.5 -3.1 2-dehydro-3-deoxy-6-phosphogalactonate aldolase compare
SMc02858 -1.4 -0.9 chaperone protein DnaJ compare
SMc00451 -1.3 -5.9 processing protease compare
SMc00405 -1.3 -8.3 hypothetical protein compare
SMa0882 -1.3 -0.5 hypothetical protein compare
SMc00302 -1.3 -4.2 hypothetical protein compare
SMc02147 -1.3 -5.8 phosphate regulon sensor histidine kinase transmembrane protein compare
SMc02058 -1.3 -3.4 YAJC protein compare
SMc02142 -1.3 -4.0 phosphate transporter ATP-binding protein compare
SMc01622 -1.3 -4.3 oxidoreductase compare
SMc02979 -1.2 -3.9 hypothetical protein compare
SMc02144 -1.2 -3.9 phosphate ABC transporter permease compare
SM_b21679 -1.2 -1.4 hypothetical protein compare
SMa0211 -1.2 -1.3 hypothetical protein compare
SMc00928 -1.2 -1.6 signal peptide protein compare
SMc01043 -1.2 -7.5 nitrogen assimilation regulatory protein compare
SMc00013 -1.2 -2.2 cytochrome C oxidase subunit III transmembrane protein compare
SMa1201 -1.1 -2.8 hypothetical protein compare
SM_b20294 -1.1 -1.3 transcriptional regulator NanR compare
SMc03980 -1.1 -3.4 hypothetical protein compare
SM_b20549 -1.1 -2.7 hypothetical protein compare
SMc01280 -1.0 -1.9 protease compare
SMc02558 -1.0 -5.0 hypothetical protein compare
SMc00012 -1.0 -1.8 cytochrome C oxidase assembly protein compare
SMc01842 -1.0 -1.1 methyltransferase transcription regulator protein compare
SMc00982 -1.0 -4.2 dioxygenase compare
SMc04348 -1.0 -1.0 transcriptional regulator compare
SMc00856 -1.0 -1.1 hypothetical protein compare
SMc01568 -1.0 -1.5 hypothetical protein compare
SM_b21569 -1.0 -2.4 transcriptional regulator compare
SMc02677 -1.0 -5.3 pyrroline-5-carboxylate reductase compare
SMc03924 -1.0 -4.7 glycogen synthase compare
SMc02640 -1.0 -2.8 UDP-glucuronic acid epimerase compare
SMa1053 -0.9 -1.3 hypothetical protein compare
SMc01522 -0.9 -1.5 hypothetical protein compare
SMc01613 -0.9 -3.0 ribose-5-phosphate isomerase B compare
SMc02505 -0.9 -1.5 hypothetical protein compare
SMc02143 -0.9 -3.2 phosphate ABC transporter permease compare
SMc00511 -0.9 -3.1 D-ribulose-5-phosphate 3-epimerase compare
SMc03060 -0.9 -5.4 transcriptional regulator compare
SMc00053 -0.9 -0.8 monovalent cation/H+ antiporter subunit C compare
SMc01342 -0.9 -3.3 hypothetical protein compare
SMa2020 -0.9 -3.8 Transcriptional regulator compare
SMc01363 -0.9 -1.3 hypothetical protein compare
SMc00492 -0.9 -0.8 hypothetical protein compare
SM_b20711 -0.9 -1.9 hypothetical protein compare
SMc00588 -0.9 -1.2 L-arabinose 1-dehydrogenase; D-galactose 1-dehydrogenase (EC 1.1.1.46; EC 1.1.1.48) (from data) compare
SMc01183 -0.8 -1.5 LexA repressor compare
SMc04000 -0.8 -0.6 hypothetical protein compare
SMc02867 -0.8 -2.3 multidrug-efflux system transmembrane protein compare
SM_b21480 -0.8 -1.0 hypothetical protein compare
SMc02112 -0.8 -3.0 hypothetical protein compare
SMc05020 -0.8 -1.7 entericidin A precursor compare
SMc01768 -0.8 -3.2 transcriptional regulator compare
SMa1765 -0.8 -1.1 hypothetical protein compare
SMc00941 -0.8 -1.7 hypothetical protein compare
SM_b20701 -0.8 -0.9 hypothetical protein compare
SMc00073 -0.8 -1.5 hypothetical protein compare
SMc02713 -0.8 -1.2 RNA polymerase sigma-E factor (sigma-24) protein compare
SMc02521 -0.8 -2.4 glycerol-3-phosphate regulon repressor transcription regulator protein compare
SMc02050 -0.8 -3.2 trigger factor compare
SMc00189 -0.8 -2.7 cytochrome C1 protein compare
SMc02172 -0.8 -4.9 transcriptional regulator compare
SMc03993 -0.8 -4.2 hypothetical protein compare
SM_b21691 -0.8 -4.4 nitrilotriacetate monooxygenase subunit A compare
SMc04243 -0.8 -3.3 high-affinity zinc uptake system membrane ABC transporter protein compare
SMc00650 -0.8 -1.5 hypothetical protein compare
SMc02989 -0.8 -1.8 hypothetical protein compare
SMc00513 -0.7 -2.7 amino acid-binding periplasmic protein compare
SM_b21373 -0.7 -2.5 D-tagatose 6-phosphate 4-epimerase [EC:5.1.3.40] (from data) compare
SMc02861 -0.7 -0.9 phosphate transporter compare
SMa0659 -0.7 -1.9 cytochrome c binding protein, carboxyl terminus compare
SMc03242 -0.7 -1.8 GTP-binding protein compare


Specific Phenotypes

For 6 genes in this experiment

For carbon source Mannobiose in Sinorhizobium meliloti 1021

For carbon source Mannobiose across organisms