Experiment set14IT043 for Sinorhizobium meliloti 1021

Compare to:

Lactitol carbon source

200 most important genes:

  gene name fitness t score description  
SMc01726 -6.6 -4.6 acetylglutamate kinase compare
SMc02569 -6.6 -4.6 imidazole glycerol phosphate synthase subunit HisF compare
SMc02766 -6.5 -13.9 tryptophan synthase subunit beta compare
SMc00235 -6.1 -8.4 anthranilate phosphoribosyltransferase compare
SMc02725 -6.0 -10.8 anthranilate synthase compare
SMc00640 -5.9 -9.0 phosphoserine aminotransferase compare
SMc01494 -5.9 -13.1 phosphoserine phosphatase compare
SMc02899 -5.8 -11.7 prephenate dehydratase compare
SMc02217 -5.8 -5.6 O-succinylhomoserine sulfhydrylase compare
SMc00917 -5.7 -5.5 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) compare
SMc02717 -5.6 -13.7 2-isopropylmalate synthase compare
SMc00918 -5.6 -8.5 ATP phosphoribosyltransferase regulatory subunit compare
SMc02767 -5.4 -9.0 N-(5'-phosphoribosyl)anthranilate isomerase compare
SMc01843 -5.4 -12.7 5,10-methylenetetrahydrofolate reductase compare
SMc02425 -5.3 -5.1 transcriptional regulator compare
SMc02765 -5.3 -13.1 tryptophan synthase subunit alpha compare
SMc00711 -5.3 -4.6 cyclohexadienyl dehydrogenase compare
SMc02137 -5.2 -3.6 ornithine carbamoyltransferase compare
SMc01004 -5.2 -11.1 phosphoribosyl-AMP cyclohydrolase compare
SMc00293 -5.1 -11.4 homoserine dehydrogenase compare
SMc04045 -5.0 -9.6 dihydroxy-acid dehydratase compare
SMc01431 -5.0 -16.0 acetolactate synthase 3 catalytic subunit compare
SMc00488 -5.0 -17.6 phosphoribosylformylglycinamidine synthase II compare
SMc00092 -4.9 -13.4 phosphoadenosine phosphosulfate reductase compare
SMc02123 -4.8 -4.2 required for sulfate utilization, putative electron transport protein for sulfite reductase (from data) compare
SMc03797 -4.7 -8.5 homoserine O-succinyltransferase compare
SMc03823 -4.7 -12.9 isopropylmalate isomerase large subunit compare
SMc03112 -4.6 -19.3 B12-dependent methionine synthase compare
SMc01881 -4.6 -4.4 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
SMc00131 -4.5 -13.2 transcriptional regulator compare
SMc04028 -4.5 -20.9 glutamate synthase compare
SMc00493 -4.5 -6.6 phosphoribosylformylglycinamidine synthase I compare
SMc00614 -4.5 -7.9 phosphoribosylglycinamide formyltransferase compare
SMc04001 -4.5 -1.7 phosphoribosylaminoimidazole carboxylase catalytic subunit protein compare
SMc03776 -4.4 -3.1 gamma-glutamyl kinase compare
SMc03974 -4.4 -6.8 hypothetical protein compare
SMc00494 -4.4 -2.4 phosphoribosylformylglycinamidine synthase subunit PurS compare
SMa1635 -4.2 -2.3 hypothetical protein compare
SMc00236 -4.2 -4.7 Indole-3-glycerol phosphate synthase compare
SMc04346 -4.1 -7.4 ketol-acid reductoisomerase compare
SMc00554 -4.1 -9.9 amidophosphoribosyltransferase compare
SMc02124 -4.1 -15.7 nitrite reductase compare
SMc04088 -4.1 -8.6 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
SMc03777 -4.0 -7.9 gamma-glutamyl phosphate reductase compare
SMc00495 -4.0 -6.1 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
SMc03763 -4.0 -3.9 cytosine-specific methyltransferase compare
SMc02753 -4.0 -2.2 PTS system transporter subunit IIA compare
SMc04026 -3.9 -8.3 glutamate synthase compare
SMc00993 -3.9 -11.3 phosphoribosylamine--glycine ligase compare
SMc01361 -3.9 -6.0 dihydroorotase compare
SMc04405 -3.9 -7.1 3-isopropylmalate dehydrogenase compare
SMc00615 -3.9 -9.2 phosphoribosylaminoimidazole synthetase compare
SMc02141 -3.8 -5.8 phosphate transporter PhoU compare
SMc01801 -3.8 -3.0 N-acetylglutamylphosphate reductase (EC 1.2.1.38) (from data) compare
SMc00090 -3.7 -10.5 sulfate adenylyltransferase compare
SMc02570 -3.7 -6.3 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
SMc03795 -3.7 -2.0 isopropylmalate isomerase small subunit compare
SMc01880 -3.7 -2.5 pantoate--beta-alanine ligase compare
SMc00641 -3.7 -7.5 D-3-phosphoglycerate dehydrogenase compare
SMc02245 -3.6 -6.5 dihydroorotate dehydrogenase 2 compare
SMc00882 -3.6 -4.1 2-dehydro-3-deoxy-6-phosphogalactonate aldolase compare
SMc02755 -3.6 -8.0 S-adenosyl-L-homocysteine hydrolase compare
SMa1924 -3.6 -1.4 hypothetical protein compare
SMc02572 -3.5 -2.7 imidazole glycerol phosphate synthase subunit HisH compare
SMc04002 -3.5 -5.4 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
SMc02246 -3.5 -1.3 hypothetical protein compare
SMc01053 -3.5 -4.6 siroheme synthase compare
SMc02166 -3.4 -9.5 dihydroorotase compare
SMc00017 -3.3 -1.7 homoserine kinase compare
SMc03826 -3.3 -2.3 argininosuccinate synthase compare
SMc02165 -3.3 -7.8 orotate phosphoribosyltransferase compare
SMc01054 -3.2 -3.7 required for sulfate utilization, putative electron source for sulfite reductase CysI (from data) compare
SMc00876 -3.2 -7.7 ATP-binding MRP protein compare
SMc02724 -3.2 -3.7 hypothetical protein compare
SMc00982 -3.2 -6.7 dioxygenase compare
SMc00412 -3.2 -4.3 orotidine 5'-phosphate decarboxylase compare
SMc01360 -3.1 -4.5 aspartate carbamoyltransferase catalytic subunit compare
SMc01770 -3.0 -1.9 serine hydroxymethyltransferase compare
SMc00091 -3.0 -10.3 sulfate adenylyltransferase compare
SMc00295 -3.0 -1.5 hypothetical protein compare
SMc01206 -2.8 -2.5 queuine tRNA-ribosyltransferase compare
SMc02707 -2.8 -2.8 hypothetical protein compare
SMc02147 -2.7 -6.1 phosphate regulon sensor histidine kinase transmembrane protein compare
SMc00450 -2.7 -4.1 protoheme IX farnesyltransferase compare
SM_b21655 -2.7 -11.3 Beta-galactosidase (EC 3.2.1.23) (from data) compare
SMc02140 -2.6 -2.4 phosphate regulon transcriptional regulatory protein compare
SMc02138 -2.6 -6.7 acetylornithine transaminase compare
SMc01569 -2.5 -1.3 carbamoyl phosphate synthase small subunit compare
SMa0789 -2.5 -4.9 GntR family transcriptional regulator compare
SM_b21174 -2.4 -5.6 phosphate uptake ABC transporter permease compare
SMc02047 -2.4 -6.3 glycine cleavage system aminomethyltransferase T compare
SMc01215 -2.3 -2.2 carbamoyl phosphate synthase large subunit compare
SMc03979 -2.3 -2.7 glyceraldehyde-3-phosphate dehydrogenase compare
SMc01842 -2.3 -2.4 methyltransferase transcription regulator protein compare
SMc03140 -2.2 -5.1 transcriptional regulator compare
SMc00451 -2.2 -6.2 processing protease compare
SMc03100 -2.2 -1.4 hypothetical protein compare
SM_b21175 -2.1 -4.6 phosphate uptake ABC transporter permease compare
SMc03895 -2.1 -12.2 pyruvate carboxylase compare
SMc00492 -2.1 -1.1 hypothetical protein compare
SMc02048 -2.1 -4.9 glycine cleavage system protein H compare
SMc00815 -2.0 -2.0 inosine 5'-monophosphate dehydrogenase compare
SMc02307 -2.0 -5.3 histidinol dehydrogenase compare
SM_b21096 -2.0 -1.5 amino acid transporter ABC transporter ATP-binding protein compare
SMc03978 -1.9 -2.9 transketolase compare
SM_b21652 -1.8 -6.4 ABC transporter for Lactose, periplasmic substrate-binding component (from data) conserved
SMc03993 -1.8 -5.6 hypothetical protein compare
SMc03069 -1.8 -2.4 6-phosphogluconolactonase compare
SM_b20148 -1.8 -4.2 transcriptional regulator compare
SMa5010 -1.8 -1.5 hypothetical protein compare
SM_b21176 -1.8 -3.9 phosphate uptake ABC transporter substrate-binding protein precursor compare
SMc02142 -1.8 -3.5 phosphate transporter ATP-binding protein compare
SMc02084 -1.7 -1.1 biopolymer transport transmembrane protein compare
SMc02172 -1.7 -5.0 transcriptional regulator compare
SMc02228 -1.7 -3.7 acetyl-CoA acetyltransferase compare
SMa0211 -1.7 -1.5 hypothetical protein compare
SMc01568 -1.7 -1.8 hypothetical protein compare
SMc00334 -1.7 -2.2 cytidylate kinase compare
SMc02112 -1.7 -6.0 hypothetical protein compare
SMc04256 -1.7 -9.7 ABC transporter for D-Cellobiose and D-Salicin, ATPase component (from data) conserved
SMc00981 -1.7 -5.4 ferredoxin protein compare
SMc02225 -1.7 -3.9 hypothetical protein compare
SM_b21177 -1.7 -4.5 phosphate uptake ABC transporter ATP-binding protein compare
SMc02495 -1.7 -2.1 translaldolase compare
SMc04257 -1.6 -9.4 ABC transporter for D-Cellobiose and D-Salicin, permease component 1 (from data) conserved
SMc01124 -1.6 -5.9 PII uridylyl-transferase compare
SMc01430 -1.6 -4.4 acetolactate synthase 3 regulatory subunit compare
SMc02308 -1.6 -6.1 hypothetical protein compare
SMc01454 -1.6 -9.2 hypothetical protein compare
SMc00294 -1.6 -5.6 aminotransferase compare
SMc01622 -1.6 -5.2 oxidoreductase compare
SMc01500 -1.6 -3.2 sorbitol dehydrogenase compare
SMc03258 -1.6 -5.4 transcriptional regulator compare
SMc01592 -1.5 -5.5 transcriptional regulator compare
SMc00619 -1.5 -2.0 hypothetical protein compare
SMc02510 -1.5 -1.0 ferric uptake regulation protein compare
SM_b20701 -1.5 -1.1 hypothetical protein compare
SM_b21646 -1.5 -8.3 ABC transporter for D-Raffinose, permease component 2 (from data) compare
SMc02858 -1.5 -0.8 chaperone protein DnaJ compare
SMc00356 -1.5 -4.3 lysyl-tRNA synthetase compare
SM_b21373 -1.5 -4.6 D-tagatose 6-phosphate 4-epimerase [EC:5.1.3.40] (from data) compare
SMc01164 -1.5 -6.9 hypothetical protein compare
SMa1765 -1.5 -1.3 hypothetical protein compare
SMc02234 -1.5 -2.0 hypothetical protein compare
SM_b21653 -1.5 -4.5 ABC transporter for Lactose, permease component 1 (from data) compare
SM_b21645 -1.5 -3.6 ABC transporter for D-Raffinose, permease component 1 (from data) compare
SMc02833 -1.4 -1.5 penicillin-insensitive murein endopeptidase compare
SMc04224 -1.4 -1.7 hypothetical protein compare
SMc02521 -1.4 -2.6 glycerol-3-phosphate regulon repressor transcription regulator protein compare
SMc03981 -1.4 -4.5 phosphoglycerate kinase compare
SM_b21647 -1.4 -9.5 ABC transporter for D-Raffinose, periplasmic substrate-binding protein (from data) compare
SMc02697 -1.4 -1.7 hypothetical protein compare
SMc02229 -1.4 -7.3 acyl-CoA dehydrogenase compare
SMa1095 -1.4 -1.0 hypothetical protein compare
SMc04259 -1.4 -3.9 ABC transporter for D-Cellobiose and D-Salicin, periplasmic substrate-binding protein (from data) compare
SMc04327 -1.3 -1.2 hypothetical protein compare
SMc04005 -1.3 -4.4 pyruvate kinase compare
SMa1174 -1.3 -1.7 hypothetical protein compare
SMc00941 -1.3 -1.9 hypothetical protein compare
SMc02983 -1.3 -4.2 ornithine, DAP, or arginine decarboxylase compare
SM_b21035 -1.3 -3.8 hypothetical protein compare
SMc00513 -1.3 -5.5 amino acid-binding periplasmic protein compare
SMc04258 -1.3 -6.5 ABC transporter for D-Cellobiose and D-Salicin, permease component 2 (from data) conserved
SMc01441 -1.3 -3.9 membrane bound protease compare
SM_b21644 -1.3 -7.2 ABC transporter for D-Raffinose, ATPase component (from data) compare
SMc00239 -1.3 -1.1 hypothetical protein compare
SMc00025 -1.3 -5.8 pyruvate phosphate dikinase compare
SMc00856 -1.3 -1.0 hypothetical protein compare
SM_b21654 -1.3 -6.3 ABC transporter for Lactose, permease component 2 (from data) compare
SMc02144 -1.3 -3.1 phosphate ABC transporter permease compare
SM_b21181 -1.2 -4.8 glutaryl-CoA dehydrogenase compare
SMc00088 -1.2 -1.2 hypothetical protein compare
SMc00622 -1.2 -4.1 ribonuclease D protein compare
SMc01768 -1.2 -2.9 transcriptional regulator compare
SM_b20154 -1.2 -4.9 transcriptional regulator compare
SMc01440 -1.2 -4.5 hydrolase serine protease transmembrane protein compare
SMa2020 -1.2 -5.0 Transcriptional regulator compare
SM_b20580 -1.2 -2.0 LysR family transcriptional regulator compare
SMc00369 -1.2 -1.3 oxidoreductase compare
SMc02227 -1.2 -3.3 fatty oxidation complex enoyl-COA hydratase/3-hydroxyacyl-COA dehydrogenase/3-hydroxybutyryl-COA epimerase compare
SM_b21372 -1.2 -6.6 LacI family transcriptional regulator compare
SM_b20312 -1.2 -5.1 dihydroxyacetone kinase compare
SM_b20258 -1.2 -2.7 transcriptional regulator compare
SMc01147 -1.2 -3.0 coproporphyrinogen III oxidase compare
SMc04344 -1.2 -1.8 signal peptide protein compare
SMc02058 -1.2 -2.7 YAJC protein compare
SMc02049 -1.2 -7.8 glycine dehydrogenase compare
SMa0222 -1.2 -1.4 GntR family transcriptional regulator compare
SMc00511 -1.2 -3.1 D-ribulose-5-phosphate 3-epimerase compare
SMc02107 -1.1 -1.1 hypothetical protein compare
SMc00349 -1.1 -5.5 GTP-binding protein LepA compare
SM_b20392 -1.1 -3.6 transcriptional regulator NanR compare
SM_b21551 -1.1 -1.1 hypothetical protein compare
SMc00881 -1.1 -4.3 2-dehydro-3-deoxygalactonokinase compare
SMc01499 -1.1 -6.5 ATP-binding transport ABC transporter protein compare
SMa0717 -1.1 -5.5 hypothetical protein compare
SM_b21102 -1.1 -6.2 transcriptional regulator compare
SM_b21598 -1.1 -3.9 transcriptional regulator compare
SMc01144 -1.1 -2.8 ribonuclease PH compare
SMc02478 -1.1 -5.5 hypothetical protein compare


Specific Phenotypes

For 18 genes in this experiment

For carbon source Lactitol in Sinorhizobium meliloti 1021

For carbon source Lactitol across organisms