Experiment set14IT043 for Klebsiella michiganensis M5al

Compare to:

RCH2_defined_noCarbon with Mixed culture; Cupriavidus sp. AnTP704 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x

200 most important genes:

  gene name fitness t score description  
BWI76_RS26455 -4.7 -2.1 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase compare
BWI76_RS08520 -4.3 -2.3 colicin transporter TolQ compare
BWI76_RS23265 -4.3 -1.9 hypothetical protein compare
BWI76_RS09760 -4.1 -2.8 3-phosphoshikimate 1-carboxyvinyltransferase compare
BWI76_RS22690 -4.1 -2.8 adenylyl-sulfate kinase compare
BWI76_RS08385 -4.1 -3.8 citrate (Si)-synthase compare
BWI76_RS26460 -4.0 -3.9 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
BWI76_RS23365 -3.9 -5.5 LysR family transcriptional regulator compare
BWI76_RS05015 -3.8 -2.4 transcriptional regulator compare
BWI76_RS21465 -3.1 -6.0 bifunctional chorismate mutase/prephenate dehydratase compare
BWI76_RS17980 -3.1 -4.7 RNA chaperone ProQ compare
BWI76_RS22755 -3.1 -4.2 phosphoadenosine phosphosulfate reductase compare
BWI76_RS16895 -3.0 -1.3 3-(3-hydroxy-phenyl)propionate transporter MhpT compare
BWI76_RS06535 -3.0 -2.0 endopeptidase La compare
BWI76_RS00965 -3.0 -0.9 acetolactate synthase 2 small subunit compare
BWI76_RS15825 -2.9 -1.2 hypothetical protein compare
BWI76_RS08535 -2.9 -1.5 translocation protein TolB compare
BWI76_RS21580 -2.8 -1.5 SsrA-binding protein compare
BWI76_RS05840 -2.8 -3.8 glutamate 5-kinase compare
BWI76_RS10990 -2.8 -2.2 dihydroorotase compare
BWI76_RS11840 -2.7 -4.9 tryptophan synthase subunit alpha compare
BWI76_RS05260 -2.7 -1.5 chaperone compare
BWI76_RS21310 -2.7 -1.5 DNA repair protein RecO compare
BWI76_RS22765 -2.7 -9.2 sulfite reductase subunit alpha compare
BWI76_RS16425 -2.7 -4.1 hypothetical protein compare
BWI76_RS04470 -2.6 -8.2 carbamoyl phosphate synthase large subunit compare
BWI76_RS02815 -2.6 -1.8 fructose-bisphosphatase class I compare
BWI76_RS08605 -2.6 -2.1 phosphoglyceromutase compare
BWI76_RS21475 -2.6 -2.5 bifunctional chorismate mutase/prephenate dehydrogenase compare
BWI76_RS04645 -2.6 -3.0 3-dehydroquinase compare
BWI76_RS04160 -2.6 -3.1 phosphoserine phosphatase compare
BWI76_RS11845 -2.5 -2.7 tryptophan synthase subunit beta compare
BWI76_RS17975 -2.5 -4.0 tail-specific protease compare
BWI76_RS00875 -2.5 -4.4 DNA-binding transcriptional regulator FabR compare
BWI76_RS21370 -2.5 -1.0 ATP-dependent RNA helicase SrmB compare
BWI76_RS07465 -2.5 -1.5 TetR family transcriptional regulator compare
BWI76_RS11855 -2.5 -9.7 bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase compare
BWI76_RS13755 -2.4 -2.1 hypothetical protein compare
BWI76_RS25335 -2.4 -1.7 stringent starvation protein A compare
BWI76_RS08530 -2.4 -1.7 protein TolA compare
BWI76_RS09910 -2.3 -13.7 dihydroorotate dehydrogenase (quinone) compare
BWI76_RS18935 -2.3 -11.0 bifunctional imidazole glycerol-phosphate dehydratase/histidinol phosphatase compare
BWI76_RS24580 -2.3 -2.2 PTS-dependent dihydroxyacetone kinase operon transcriptional regulator DhaR compare
BWI76_RS14390 -2.3 -1.4 hypothetical protein compare
BWI76_RS20355 -2.3 -2.8 colicin V production protein compare
BWI76_RS00345 -2.3 -3.4 protein disulfide oxidoreductase DsbA compare
BWI76_RS23920 -2.3 -2.3 D-3-phosphoglycerate dehydrogenase compare
BWI76_RS26395 -2.2 -4.7 cell division protein FtsE compare
BWI76_RS07070 -2.2 -3.4 5-(carboxyamino)imidazole ribonucleotide mutase compare
BWI76_RS01610 -2.2 -10.6 phosphoribosylamine--glycine ligase compare
BWI76_RS23360 -2.2 -1.3 diaminopimelate decarboxylase compare
BWI76_RS11850 -2.2 -8.3 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase compare
BWI76_RS00835 -2.2 -11.1 phosphoenolpyruvate carboxylase compare
BWI76_RS01615 -2.2 -8.3 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase compare
BWI76_RS00975 -2.2 -10.4 dihydroxy-acid dehydratase compare
BWI76_RS24605 -2.2 -4.9 dihydroxyacetone kinase subunit DhaM compare
BWI76_RS25645 -2.2 -5.2 shikimate dehydrogenase compare
BWI76_RS08210 -2.1 -1.3 N-acetylglucosamine-6-phosphate deacetylase compare
BWI76_RS07065 -2.1 -9.4 5-(carboxyamino)imidazole ribonucleotide synthase compare
BWI76_RS21795 -2.1 -3.9 EAL domain-containing protein compare
BWI76_RS27820 -2.1 -0.9 ilvB operon leader peptide IvbL compare
BWI76_RS20895 -2.1 -4.0 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
BWI76_RS14300 -2.1 -2.6 hypothetical protein compare
BWI76_RS04465 -2.1 -4.9 carbamoyl-phosphate synthase small subunit compare
BWI76_RS05120 -2.1 -6.3 bifunctional glycosyl transferase/transpeptidase compare
BWI76_RS12090 -2.1 -1.8 HNH endonuclease compare
BWI76_RS20360 -2.1 -0.9 cell division protein DedD compare
BWI76_RS00855 -2.1 -9.3 argininosuccinate lyase compare
BWI76_RS04250 -2.1 -6.0 homoserine kinase compare
BWI76_RS19840 -2.1 -0.6 hypothetical protein compare
BWI76_RS18930 -2.1 -4.8 histidinol-phosphate transaminase compare
BWI76_RS11965 -2.1 -5.5 orotidine-5'-phosphate decarboxylase compare
BWI76_RS04675 -2.0 -5.1 3-isopropylmalate dehydrogenase compare
BWI76_RS18950 -2.0 -4.1 imidazole glycerol phosphate synthase cyclase subunit compare
BWI76_RS18925 -2.0 -8.4 histidinol dehydrogenase compare
BWI76_RS04255 -2.0 -7.5 threonine synthase compare
BWI76_RS00240 -2.0 -1.5 FMN-binding protein MioC compare
BWI76_RS20350 -2.0 -6.8 amidophosphoribosyltransferase compare
BWI76_RS08525 -1.9 -2.2 colicin transporter compare
BWI76_RS06680 -1.9 -1.2 hypothetical protein compare
BWI76_RS22760 -1.9 -4.2 sulfite reductase subunit beta compare
BWI76_RS21265 -1.9 -10.0 phosphoribosylformylglycinamidine synthase compare
BWI76_RS20965 -1.8 -3.8 phosphoribosylformylglycinamidine cyclo-ligase compare
BWI76_RS25920 -1.8 -1.4 peptidylprolyl isomerase compare
BWI76_RS23220 -1.8 -6.2 amino-acid N-acetyltransferase compare
BWI76_RS15690 -1.8 -3.2 hypothetical protein compare
BWI76_RS11860 -1.8 -9.5 anthranilate synthase component I compare
BWI76_RS01385 -1.8 -2.1 potassium transporter compare
BWI76_RS26470 -1.8 -3.5 4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase compare
BWI76_RS21570 -1.8 -2.0 RnfH family protein compare
BWI76_RS12750 -1.8 -3.3 hypothetical protein compare
BWI76_RS21450 -1.8 -1.6 23S rRNA pseudouridine(1911/1915/1917) synthase compare
BWI76_RS20440 -1.8 -2.2 50S ribosomal protein L3 N(5)-glutamine methyltransferase compare
BWI76_RS11980 -1.8 -1.6 DeoR family transcriptional regulator compare
BWI76_RS22805 -1.8 -8.0 GTP diphosphokinase compare
BWI76_RS04705 -1.7 -3.8 DNA-binding transcriptional regulator FruR compare
BWI76_RS00990 -1.7 -7.3 ketol-acid reductoisomerase compare
BWI76_RS09625 -1.7 -1.0 hypothetical protein compare
BWI76_RS15115 -1.7 -1.2 MFS transporter compare
BWI76_RS27385 -1.7 -4.7 orotate phosphoribosyltransferase compare
BWI76_RS17195 -1.7 -2.0 hypothetical protein compare
BWI76_RS01080 -1.7 -6.4 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase compare
BWI76_RS02995 -1.7 -4.7 aspartate carbamoyltransferase compare
BWI76_RS25070 -1.7 -1.3 hypothetical protein compare
BWI76_RS04685 -1.7 -5.8 putative leucine operon leader peptide compare
BWI76_RS19495 -1.7 -1.0 ABC transporter, quaternary amine uptake transporter (QAT) family, ATP-binding protein compare
BWI76_RS00785 -1.7 -6.0 cystathionine gamma-synthase compare
BWI76_RS05835 -1.7 -1.5 gamma-glutamyl-phosphate reductase compare
BWI76_RS04665 -1.6 -11.5 3-isopropylmalate dehydratase small subunit compare
BWI76_RS01115 -1.6 -2.0 dTDP-4-amino-4,6-dideoxygalactose transaminase compare
BWI76_RS14320 -1.6 -1.8 hypothetical protein compare
BWI76_RS18940 -1.6 -5.2 imidazole glycerol phosphate synthase subunit HisH compare
BWI76_RS26390 -1.6 -4.2 cell division protein FtsX compare
BWI76_RS08380 -1.6 -1.1 endonuclease VIII compare
BWI76_RS26665 -1.6 -3.0 DNA-binding response regulator compare
BWI76_RS22090 -1.6 -1.3 transcriptional regulator compare
BWI76_RS24740 -1.6 -2.1 GntR family transcriptional regulator compare
BWI76_RS00805 -1.6 -3.9 5,10-methylenetetrahydrofolate reductase compare
BWI76_RS01135 -1.6 -3.7 lipopolysaccharide N-acetylmannosaminouronosyltransferase compare
BWI76_RS15110 -1.5 -4.2 putative excinuclease ABC subunit A compare
BWI76_RS25960 -1.5 -3.4 NUDIX hydrolase compare
BWI76_RS08040 -1.5 -1.7 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH compare
BWI76_RS27425 -1.5 -1.3 DNA-directed RNA polymerase subunit omega compare
BWI76_RS12495 -1.5 -1.0 2-Cys peroxiredoxin compare
BWI76_RS01800 -1.5 -2.1 glucose-6-phosphate isomerase compare
BWI76_RS04670 -1.5 -8.2 3-isopropylmalate dehydratase large subunit compare
BWI76_RS09190 -1.5 -1.4 hypothetical protein compare
BWI76_RS14305 -1.5 -2.8 metallophosphoesterase compare
BWI76_RS12270 -1.5 -2.3 hypothetical protein compare
BWI76_RS00980 -1.5 -5.6 PLP-dependent threonine dehydratase compare
BWI76_RS05450 -1.5 -0.6 ribonuclease HI compare
BWI76_RS18000 -1.5 -3.9 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF compare
BWI76_RS26440 -1.5 -1.1 hypothetical protein compare
BWI76_RS12895 -1.5 -2.5 hypothetical protein compare
BWI76_RS12070 -1.5 -0.9 hypothetical protein compare
BWI76_RS09645 -1.5 -0.6 thioredoxin-disulfide reductase compare
BWI76_RS00845 -1.5 -5.2 N-acetyl-gamma-glutamyl-phosphate reductase compare
BWI76_RS04245 -1.5 -8.2 bifunctional aspartate kinase/homoserine dehydrogenase I compare
BWI76_RS26570 -1.4 -1.0 anion permease compare
BWI76_RS21070 -1.4 -1.4 outer membrane protein assembly factor BamB compare
BWI76_RS17720 -1.4 -0.4 muramoyltetrapeptide carboxypeptidase compare
BWI76_RS10465 -1.4 -3.2 hypothetical protein compare
BWI76_RS00715 -1.4 -1.0 two-component sensor histidine kinase compare
BWI76_RS17300 -1.4 -1.0 tRNA-Tyr compare
BWI76_RS02775 -1.4 -3.1 outer membrane protein assembly factor compare
BWI76_RS19010 -1.4 -2.2 polysaccharide pyruvyl transferase yvff compare
BWI76_RS24595 -1.4 -1.8 dihydroxyacetone kinase subunit DhaK compare
BWI76_RS08395 -1.4 -1.5 succinate dehydrogenase cytochrome b556 large subunit compare
BWI76_RS05680 -1.4 -3.2 LacI family transcriptional regulator compare
BWI76_RS15000 -1.4 -2.5 amino acid ABC transporter ATP-binding protein compare
BWI76_RS27390 -1.4 -3.1 ribonuclease PH compare
BWI76_RS01185 -1.4 -0.9 adenylate cyclase compare
BWI76_RS25870 -1.4 -1.2 elongation factor Tu compare
BWI76_RS00710 -1.4 -1.6 6-N-hydroxylaminopurine resistance protein compare
BWI76_RS01095 -1.4 -1.2 UDP-N-acetyl-D-mannosamine dehydrogenase compare
BWI76_RS04680 -1.3 -8.0 2-isopropylmalate synthase compare
BWI76_RS16920 -1.3 -0.9 3-(2,3-dihydroxyphenyl)propionate dioxygenase compare
BWI76_RS14770 -1.3 -0.9 PTS IIA 2 domain protein compare
BWI76_RS09335 -1.3 -0.9 baseplate assembly protein W compare
BWI76_RS18955 -1.3 -5.1 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase compare
BWI76_RS25115 -1.3 -3.9 argininosuccinate synthase compare
BWI76_RS10930 -1.3 -4.9 glucan biosynthesis protein G compare
BWI76_RS04240 -1.3 -2.0 thr operon leader peptide compare
BWI76_RS03010 -1.3 -4.4 ornithine carbamoyltransferase compare
BWI76_RS00400 -1.3 -0.6 glutamine synthetase compare
BWI76_RS26075 -1.3 -0.9 DNA adenine methylase compare
BWI76_RS04270 -1.3 -3.4 transaldolase compare
BWI76_RS25065 -1.3 -1.9 polyribonucleotide nucleotidyltransferase compare
BWI76_RS24400 -1.2 -2.6 outer membrane channel protein TolC compare
BWI76_RS14005 -1.2 -1.2 TetR family transcriptional regulator compare
BWI76_RS09755 -1.2 -2.2 phosphoserine transaminase compare
BWI76_RS01200 -1.2 -0.8 diaminopimelate epimerase compare
BWI76_RS00095 -1.2 -1.6 DNA-binding transcriptional regulator compare
BWI76_RS11440 -1.2 -1.0 hypothetical protein compare
BWI76_RS08405 -1.2 -1.7 succinate dehydrogenase flavoprotein subunit compare
BWI76_RS00985 -1.2 -4.0 transcriptional regulator IlvY compare
BWI76_RS16965 -1.2 -1.8 murein lipoprotein compare
BWI76_RS12390 -1.2 -1.6 antibiotic biosynthesis monooxygenase compare
BWI76_RS15605 -1.2 -2.1 hypothetical protein compare
BWI76_RS00850 -1.2 -4.7 acetylglutamate kinase compare
BWI76_RS16375 -1.2 -1.9 electron transport complex subunit G compare
BWI76_RS12265 -1.2 -3.0 hypothetical protein compare
BWI76_RS08495 -1.2 -3.0 cytochrome bd-I ubiquinol oxidase subunit I compare
BWI76_RS23490 -1.2 -3.9 fimbrial protein compare
BWI76_RS04305 -1.2 -0.8 molecular chaperone DnaJ compare
BWI76_RS14325 -1.2 -1.8 maturase compare
BWI76_RS27780 -1.2 -1.4 hypothetical protein compare
BWI76_RS09825 -1.2 -2.9 envelope biogenesis factor ElyC compare
BWI76_RS02610 -1.2 -3.0 transcriptional regulator compare
BWI76_RS02780 -1.2 -7.0 translocation and assembly module TamB compare
BWI76_RS00600 -1.1 -4.0 LacI family transcriptional regulator compare
BWI76_RS23480 -1.1 -8.0 EAL domain-containing protein compare
BWI76_RS12335 -1.1 -4.0 hypothetical protein compare
BWI76_RS09255 -1.1 -1.9 hypothetical protein compare
BWI76_RS12200 -1.1 -1.6 hypothetical protein compare
BWI76_RS09670 -1.1 -2.2 recombination factor protein RarA compare
BWI76_RS12325 -1.1 -7.9 hypothetical protein compare
BWI76_RS20130 -1.1 -2.4 NADH-quinone oxidoreductase subunit N compare
BWI76_RS10035 -1.1 -1.3 hypothetical protein compare
BWI76_RS27915 -1.1 -1.5 YceK/YidQ family lipoprotein compare


Specific Phenotypes

None in this experiment

For Klebsiella michiganensis M5al in mixed community experiments

For mixed community Mixed culture; Cupriavidus sp. AnTP704 3:1 starting OD to Klebsiella across organisms