Experiment set14IT043 for Klebsiella michiganensis M5al

Compare to:

RCH2_defined_noCarbon with Mixed culture; Cupriavidus sp. AnTP704 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x

200 most detrimental genes:

  gene name fitness t score description  
BWI76_RS23895 +1.8 2.2 Xaa-Pro aminopeptidase compare
BWI76_RS07730 +1.6 1.2 iron-enterobactin transporter membrane protein compare
BWI76_RS15215 +1.6 1.5 N-acetyltransferase compare
BWI76_RS14775 +1.3 2.3 creatinine amidohydrolase compare
BWI76_RS15975 +1.2 1.1 hypothetical protein compare
BWI76_RS15260 +1.2 1.6 hypothetical protein compare
BWI76_RS19310 +1.2 3.1 ABC transporter permease compare
BWI76_RS02745 +1.2 1.5 hypothetical protein compare
BWI76_RS04515 +1.2 1.5 Co2+/Mg2+ efflux protein ApaG compare
BWI76_RS00025 +1.1 1.4 hypothetical protein compare
BWI76_RS15950 +1.1 2.2 dethiobiotin synthase compare
BWI76_RS20230 +1.1 1.7 hypothetical protein compare
BWI76_RS11680 +1.1 2.6 succinylglutamate-semialdehyde dehydrogenase compare
BWI76_RS15435 +1.1 1.3 hypothetical protein compare
BWI76_RS21375 +1.1 0.9 autonomous glycyl radical cofactor GrcA compare
BWI76_RS14805 +1.0 2.1 hypothetical protein compare
BWI76_RS13215 +1.0 1.8 type I glyceraldehyde-3-phosphate dehydrogenase compare
BWI76_RS19470 +1.0 2.2 DNA-binding response regulator compare
BWI76_RS10295 +1.0 1.9 short chain dehydrogenase/reductase family oxidoreductase compare
BWI76_RS18065 +1.0 1.7 DNA polymerase III subunit theta compare
BWI76_RS01935 +1.0 1.8 thiamin phosphate synthase compare
BWI76_RS04840 +1.0 3.6 prepilin peptidase-dependent pilin compare
BWI76_RS26875 +1.0 2.2 dipeptide ABC transporter permease DppC compare
BWI76_RS14575 +1.0 2.3 TENA/THI-4 family protein compare
BWI76_RS12825 +1.0 2.6 hypothetical protein compare
BWI76_RS08310 +1.0 2.3 potassium-transporting ATPase subunit C compare
BWI76_RS20765 +1.0 2.8 ethanolamine ammonia lyase large subunit compare
BWI76_RS12780 +0.9 2.4 hypothetical protein compare
BWI76_RS11755 +0.9 3.9 catalase HPII compare
BWI76_RS18810 +0.9 2.9 nitrogenase iron protein compare
BWI76_RS20715 +0.9 1.6 RpoE-regulated lipoprotein compare
BWI76_RS02180 +0.9 1.3 hypothetical protein compare
BWI76_RS14930 +0.9 2.1 hypothetical protein compare
BWI76_RS18165 +0.9 1.0 NUDIX pyrophosphatase compare
BWI76_RS20900 +0.9 1.1 outer membrane protein assembly factor BamC compare
BWI76_RS14980 +0.9 0.8 hypothetical protein compare
BWI76_RS11810 +0.9 1.2 outer membrane protein OmpW compare
BWI76_RS05465 +0.9 1.1 amidohydrolase compare
BWI76_RS18305 +0.9 2.3 dihydrodipicolinate synthase family protein compare
BWI76_RS16160 +0.9 2.0 LysR family transcriptional regulator compare
BWI76_RS14765 +0.9 3.6 PTS lactose/cellobiose transporter subunit IIB compare
BWI76_RS11430 +0.9 0.8 lipoprotein compare
BWI76_RS11435 +0.9 1.3 hypothetical protein compare
BWI76_RS08825 +0.9 2.6 cyclic pyranopterin monophosphate synthase MoaC compare
BWI76_RS21365 +0.9 1.6 tRNA (adenosine(37)-N6)-methyltransferase TrmM compare
BWI76_RS23250 +0.8 2.1 hypothetical protein compare
BWI76_RS23340 +0.8 1.1 transcriptional regulator compare
BWI76_RS21685 +0.8 0.9 hypothetical protein compare
BWI76_RS16760 +0.8 2.4 lipase compare
BWI76_RS19700 +0.8 1.2 deoxyribonuclease IV compare
BWI76_RS09720 +0.8 3.3 PTS ascorbate transporter subunit IIB compare
BWI76_RS13625 +0.8 1.5 hypothetical protein compare
BWI76_RS14750 +0.8 3.7 transcriptional regulator compare
BWI76_RS07255 +0.8 1.5 hypothetical protein compare
BWI76_RS10530 +0.8 2.2 GntR family transcriptional regulator with compare
BWI76_RS07350 +0.8 2.5 alcohol dehydrogenase compare
BWI76_RS05810 +0.8 1.0 hypothetical protein compare
BWI76_RS07725 +0.8 0.9 iron-enterobactin transporter permease compare
BWI76_RS09565 +0.8 2.9 hybrid-cluster NAD(P)-dependent oxidoreductase compare
BWI76_RS16335 +0.8 1.2 division septum protein Blr compare
BWI76_RS07780 +0.8 0.9 hypothetical protein compare
BWI76_RS07855 +0.8 2.1 PucR family transcriptional regulator compare
BWI76_RS19935 +0.8 1.2 hypothetical protein compare
BWI76_RS11150 +0.8 1.1 membrane protein compare
BWI76_RS12480 +0.8 3.3 TIGR01620 family protein compare
BWI76_RS26630 +0.8 2.5 pimeloyl-[acyl-carrier protein] methyl ester esterase compare
BWI76_RS06080 +0.8 2.8 taurine dioxygenase compare
BWI76_RS24810 +0.8 2.7 hypothetical protein compare
BWI76_RS16300 +0.7 1.4 bifunctional beta-cystathionase/maltose regulon regulatory protein compare
BWI76_RS18175 +0.7 4.0 hydrolase compare
BWI76_RS22430 +0.7 1.9 manganese/iron transporter ATP-binding protein compare
BWI76_RS14925 +0.7 1.4 ABC transporter substrate-binding protein compare
BWI76_RS17400 +0.7 0.9 transporter compare
BWI76_RS05790 +0.7 0.9 phage DNA-binding protein compare
BWI76_RS03560 +0.7 2.7 propanediol utilization phosphotransacylase compare
BWI76_RS11645 +0.7 2.7 ABC transporter substrate-binding protein compare
BWI76_RS16025 +0.7 1.8 triphosphoribosyl-dephospho-CoA synthase compare
BWI76_RS01195 +0.7 1.0 membrane protein compare
BWI76_RS09390 +0.7 1.9 phage tail protein compare
BWI76_RS19330 +0.7 0.6 HAD family hydrolase compare
BWI76_RS02655 +0.7 2.0 hypothetical protein compare
BWI76_RS13980 +0.7 0.9 hypothetical protein compare
BWI76_RS18605 +0.7 1.2 oxidoreductase molybdopterin-binding protein compare
BWI76_RS07165 +0.7 2.1 hypothetical protein compare
BWI76_RS15980 +0.7 1.7 lysine transporter LysE compare
BWI76_RS24720 +0.7 1.3 hypothetical protein compare
BWI76_RS19710 +0.7 2.1 NupC/NupG family nucleoside CNT transporter compare
BWI76_RS01285 +0.7 2.2 amino acid ABC transporter substrate-binding protein compare
BWI76_RS16080 +0.7 3.3 LysR family transcriptional regulator compare
BWI76_RS26405 +0.7 0.9 16S rRNA (guanine(966)-N(2))-methyltransferase compare
BWI76_RS16795 +0.7 1.3 amino acid ABC transporter ATPase compare
BWI76_RS19465 +0.7 1.5 hypothetical protein compare
BWI76_RS11675 +0.7 1.6 arginine N-succinyltransferase compare
BWI76_RS24500 +0.7 1.5 urease subunit gamma compare
BWI76_RS16915 +0.7 2.1 alpha/beta hydrolase fold protein compare
BWI76_RS09195 +0.7 0.8 N-acetyltransferase compare
BWI76_RS26005 +0.7 2.3 glutamine amidotransferase compare
BWI76_RS19585 +0.7 1.4 gentisate 1,2-dioxygenase compare
BWI76_RS23020 +0.7 1.3 cobalamin biosynthesis protein CbiQ compare
BWI76_RS23065 +0.7 1.4 cobalt-precorrin-6Y C(15)-methyltransferase compare
BWI76_RS06340 +0.7 1.8 hypothetical protein compare
BWI76_RS16055 +0.7 3.9 malonate decarboxylase subunit epsilon compare
BWI76_RS01775 +0.7 1.0 hypothetical protein compare
BWI76_RS12620 +0.7 2.5 2-nitropropane dioxygenase compare
BWI76_RS12785 +0.7 2.6 heat-shock protein HslJ compare
BWI76_RS16015 +0.7 2.3 pheromone autoinducer 2 transporter compare
BWI76_RS17325 +0.7 1.8 nitrate reductase molybdenum cofactor assembly chaperone compare
BWI76_RS23195 +0.7 1.7 ethanolamine utilization protein EutP compare
BWI76_RS01225 +0.6 3.0 magnesium transporter CorA compare
BWI76_RS05570 +0.6 0.6 hypothetical protein compare
BWI76_RS13415 +0.6 1.6 spermidine/putrescine ABC transporter permease compare
BWI76_RS06425 +0.6 3.7 MFS transporter compare
BWI76_RS16515 +0.6 1.1 LysR family transcriptional regulator compare
BWI76_RS06025 +0.6 4.2 amino acid transporter compare
BWI76_RS14415 +0.6 1.2 transcriptional regulator, TetR family protein compare
BWI76_RS14955 +0.6 2.9 peptidase M17 leucyl aminopeptidase domain-containing protein compare
BWI76_RS23030 +0.6 0.9 cobalamin biosynthesis protein CbiM compare
BWI76_RS06280 +0.6 2.7 hypothetical protein compare
BWI76_RS10535 +0.6 2.7 Asp/Glu/hydantoin racemase compare
BWI76_RS09520 +0.6 0.9 arginine ABC transporter ATP-binding protein ArtP compare
BWI76_RS18130 +0.6 2.0 zinc ABC transporter substrate-binding protein compare
BWI76_RS03595 +0.6 1.0 ethanolamine utilization protein EutM compare
BWI76_RS16150 +0.6 1.7 IclR family transcriptional regulator compare
BWI76_RS12080 +0.6 2.1 hypothetical protein compare
BWI76_RS01620 +0.6 2.9 hypothetical protein compare
BWI76_RS18005 +0.6 2.9 hypothetical protein compare
BWI76_RS16050 +0.6 3.0 malonate decarboxylase holo-ACP synthase compare
BWI76_RS07510 +0.6 0.8 hypothetical protein compare
BWI76_RS01815 +0.6 1.9 phosphate-starvation-inducible protein PsiE compare
BWI76_RS18390 +0.6 1.2 hypothetical protein compare
BWI76_RS01355 +0.6 3.0 hypothetical protein compare
BWI76_RS15790 +0.6 1.5 replication protein compare
BWI76_RS17970 +0.6 1.8 zinc metalloprotease HtpX compare
BWI76_RS03295 +0.6 0.6 transposase compare
BWI76_RS10400 +0.6 1.2 hypothetical protein compare
BWI76_RS20605 +0.6 1.8 purine-nucleoside phosphorylase compare
BWI76_RS14215 +0.6 2.6 hypothetical protein compare
BWI76_RS02720 +0.6 3.7 NAD(P)-dependent oxidoreductase compare
BWI76_RS17735 +0.6 1.2 D-amino acid dehydrogenase small subunit compare
BWI76_RS13720 +0.6 2.4 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase compare
BWI76_RS19375 +0.6 0.8 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase compare
BWI76_RS20295 +0.6 1.8 dihydroneopterin triphosphate 2'-epimerase compare
BWI76_RS01030 +0.6 3.1 cytosine/purine, uracil, thiamine, allantoin permease family protein compare
BWI76_RS08765 +0.6 1.3 8-amino-7-oxononanoate synthase compare
BWI76_RS11830 +0.6 1.7 hypothetical protein compare
BWI76_RS16485 +0.6 0.7 ribonuclease T compare
BWI76_RS23050 +0.6 1.0 cobalt-precorrin-3B C(17)-methyltransferase compare
BWI76_RS19530 +0.6 1.8 YIP1 family protein compare
BWI76_RS08375 +0.6 1.5 pyroglutamyl-peptidase I compare
BWI76_RS19360 +0.6 1.8 glucose dehydrogenase compare
BWI76_RS14800 +0.6 1.5 non-heme chloroperoxidase compare
BWI76_RS21185 +0.6 2.3 hypothetical protein compare
BWI76_RS07545 +0.6 1.7 amidase compare
BWI76_RS13880 +0.6 2.6 lysine transporter LysE compare
BWI76_RS14010 +0.6 1.8 SDR family oxidoreductase compare
BWI76_RS26285 +0.6 2.3 glycerophosphodiester phosphodiesterase compare
BWI76_RS24485 +0.6 1.0 bifunctional dihydroneopterin aldolase/7,8-dihydroneopterin epimerase compare
BWI76_RS17875 +0.6 2.2 L-serine ammonia-lyase compare
BWI76_RS16210 +0.6 0.9 hypothetical protein compare
BWI76_RS24925 +0.6 1.9 DnaA initiator-associating protein DiaA compare
BWI76_RS26760 +0.6 2.3 C4-dicarboxylate transport protein DctA (from data) compare
BWI76_RS04595 +0.6 2.8 DNA-binding transcriptional regulator AraC compare
BWI76_RS19435 +0.6 2.4 hypothetical protein compare
BWI76_RS12940 +0.6 1.4 AraC family transcriptional regulator compare
BWI76_RS07740 +0.6 0.5 Fe2+-enterobactin ABC transporter substrate-binding protein compare
BWI76_RS19200 +0.6 1.4 binding-protein-dependent transport system inner membrane protein compare
BWI76_RS20930 +0.6 1.4 arsenate reductase (glutaredoxin) compare
BWI76_RS22425 +0.6 2.0 metal ABC transporter substrate-binding protein compare
BWI76_RS25865 +0.6 2.9 ferredoxin compare
BWI76_RS13545 +0.6 0.7 N-acetyltransferase compare
BWI76_RS17085 +0.6 1.8 hypothetical protein compare
BWI76_RS11815 +0.6 0.7 hypothetical protein compare
BWI76_RS22210 +0.6 1.4 murein transglycosylase B compare
BWI76_RS23055 +0.6 1.3 cobalamin biosynthesis protein CbiG compare
BWI76_RS04600 +0.6 1.8 inner membrane protein compare
BWI76_RS09300 +0.6 2.4 phage lysozyme compare
BWI76_RS14780 +0.6 1.1 phosphotriesterase compare
BWI76_RS19390 +0.6 2.1 LysR family transcriptional regulator compare
BWI76_RS27670 +0.6 1.9 LysR family transcriptional regulator compare
BWI76_RS08640 +0.6 1.2 multidrug efflux pump-associated protein, AcrZ family compare
BWI76_RS11520 +0.6 0.6 hypothetical protein compare
BWI76_RS17805 +0.6 0.6 membrane protein compare
BWI76_RS12795 +0.6 2.9 DedA family protein compare
BWI76_RS24070 +0.6 1.3 16S rRNA (uracil(1498)-N(3))-methyltransferase compare
BWI76_RS13955 +0.6 1.2 hypothetical protein compare
BWI76_RS12600 +0.6 1.8 MFS transporter compare
BWI76_RS23520 +0.6 0.8 hypothetical protein compare
BWI76_RS22840 +0.6 0.9 transposase compare
BWI76_RS19540 +0.6 2.4 multidrug transporter permease compare
BWI76_RS13990 +0.6 2.6 allophanate hydrolase compare
BWI76_RS13685 +0.6 1.0 IclR family transcriptional regulator compare
BWI76_RS15075 +0.6 3.1 non-ribosomal peptide synthase compare
BWI76_RS13290 +0.5 1.5 protocatechuate 3,4-dioxygenase subunit beta compare
BWI76_RS00640 +0.5 1.4 L-rhamnose mutarotase compare
BWI76_RS18335 +0.5 2.4 DNA-binding response regulator compare
BWI76_RS10500 +0.5 1.0 flavoprotein monooxygenase compare
BWI76_RS14670 +0.5 0.7 hypothetical protein compare
BWI76_RS23960 +0.5 3.7 oxidative stress defense protein compare
BWI76_RS25935 +0.5 1.8 glutathione-regulated potassium-efflux system ancillary protein KefG compare
BWI76_RS06325 +0.5 0.8 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Klebsiella michiganensis M5al in mixed community experiments

For mixed community Mixed culture; Cupriavidus sp. AnTP704 3:1 starting OD to Klebsiella across organisms