Experiment set14IT042 for Klebsiella michiganensis M5al

Compare to:

RCH2_defined_noCarbon with Mixed culture; Pseudomonas simiae WCS417 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x

200 most important genes:

  gene name fitness t score description  
BWI76_RS05260 -4.5 -1.5 chaperone compare
BWI76_RS08520 -4.2 -2.3 colicin transporter TolQ compare
BWI76_RS23265 -4.2 -1.9 hypothetical protein compare
BWI76_RS17975 -3.9 -4.5 tail-specific protease compare
BWI76_RS10990 -3.9 -2.8 dihydroorotase compare
BWI76_RS05840 -3.7 -3.5 glutamate 5-kinase compare
BWI76_RS08385 -3.5 -3.8 citrate (Si)-synthase compare
BWI76_RS25335 -3.5 -1.9 stringent starvation protein A compare
BWI76_RS14065 -3.5 -2.6 hypothetical protein compare
BWI76_RS21235 -3.5 -1.1 hypothetical protein compare
BWI76_RS17980 -3.3 -4.8 RNA chaperone ProQ compare
BWI76_RS26460 -3.3 -4.4 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
BWI76_RS04240 -3.3 -1.6 thr operon leader peptide compare
BWI76_RS05075 -3.3 -1.0 type II secretion system protein GspG compare
BWI76_RS05835 -3.3 -2.1 gamma-glutamyl-phosphate reductase compare
BWI76_RS25115 -3.2 -6.6 argininosuccinate synthase compare
BWI76_RS23920 -3.1 -2.1 D-3-phosphoglycerate dehydrogenase compare
BWI76_RS08525 -3.1 -1.6 colicin transporter compare
BWI76_RS07070 -3.1 -4.4 5-(carboxyamino)imidazole ribonucleotide mutase compare
BWI76_RS22755 -3.1 -4.2 phosphoadenosine phosphosulfate reductase compare
BWI76_RS07465 -3.0 -1.3 TetR family transcriptional regulator compare
BWI76_RS26390 -3.0 -6.1 cell division protein FtsX compare
BWI76_RS04160 -3.0 -3.4 phosphoserine phosphatase compare
BWI76_RS05015 -2.9 -2.2 transcriptional regulator compare
BWI76_RS00965 -2.9 -0.9 acetolactate synthase 2 small subunit compare
BWI76_RS20355 -2.9 -3.5 colicin V production protein compare
BWI76_RS06535 -2.8 -1.9 endopeptidase La compare
BWI76_RS01350 -2.8 -0.9 NAD(P)H-flavin reductase compare
BWI76_RS00875 -2.8 -5.2 DNA-binding transcriptional regulator FabR compare
BWI76_RS04465 -2.8 -5.8 carbamoyl-phosphate synthase small subunit compare
BWI76_RS16965 -2.8 -2.0 murein lipoprotein compare
BWI76_RS08535 -2.7 -1.5 translocation protein TolB compare
BWI76_RS08210 -2.7 -1.2 N-acetylglucosamine-6-phosphate deacetylase compare
BWI76_RS01870 -2.7 -3.7 diacylglycerol kinase compare
BWI76_RS20350 -2.7 -10.1 amidophosphoribosyltransferase compare
BWI76_RS23365 -2.6 -4.3 LysR family transcriptional regulator compare
BWI76_RS04245 -2.6 -12.9 bifunctional aspartate kinase/homoserine dehydrogenase I compare
BWI76_RS08530 -2.6 -1.5 protein TolA compare
BWI76_RS04250 -2.6 -6.3 homoserine kinase compare
BWI76_RS07065 -2.6 -8.2 5-(carboxyamino)imidazole ribonucleotide synthase compare
BWI76_RS00855 -2.5 -6.8 argininosuccinate lyase compare
BWI76_RS04255 -2.5 -11.1 threonine synthase compare
BWI76_RS01115 -2.5 -2.4 dTDP-4-amino-4,6-dideoxygalactose transaminase compare
BWI76_RS04645 -2.5 -2.9 3-dehydroquinase compare
BWI76_RS26455 -2.4 -1.6 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase compare
BWI76_RS18950 -2.4 -5.5 imidazole glycerol phosphate synthase cyclase subunit compare
BWI76_RS00835 -2.4 -11.4 phosphoenolpyruvate carboxylase compare
BWI76_RS03010 -2.4 -9.1 ornithine carbamoyltransferase compare
BWI76_RS01135 -2.4 -4.3 lipopolysaccharide N-acetylmannosaminouronosyltransferase compare
BWI76_RS13820 -2.4 -1.6 hypothetical protein compare
BWI76_RS18920 -2.4 -3.4 ATP phosphoribosyltransferase compare
BWI76_RS21370 -2.4 -1.0 ATP-dependent RNA helicase SrmB compare
BWI76_RS20490 -2.4 -2.2 hypothetical protein compare
BWI76_RS19770 -2.3 -1.2 bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase compare
BWI76_RS00240 -2.3 -1.4 FMN-binding protein MioC compare
BWI76_RS09910 -2.3 -11.8 dihydroorotate dehydrogenase (quinone) compare
BWI76_RS02995 -2.3 -4.9 aspartate carbamoyltransferase compare
BWI76_RS04470 -2.3 -8.3 carbamoyl phosphate synthase large subunit compare
BWI76_RS09970 -2.3 -0.9 porin OmpA compare
BWI76_RS11840 -2.2 -3.8 tryptophan synthase subunit alpha compare
BWI76_RS20150 -2.2 -2.4 NADH:ubiquinone oxidoreductase subunit J compare
BWI76_RS11300 -2.2 -1.0 cupin compare
BWI76_RS25920 -2.2 -1.6 peptidylprolyl isomerase compare
BWI76_RS17300 -2.2 -0.9 tRNA-Tyr compare
BWI76_RS27385 -2.2 -5.8 orotate phosphoribosyltransferase compare
BWI76_RS22765 -2.2 -6.5 sulfite reductase subunit alpha compare
BWI76_RS21265 -2.1 -10.4 phosphoribosylformylglycinamidine synthase compare
BWI76_RS01630 -2.1 -1.2 16S ribosomal RNA compare
BWI76_RS26395 -2.1 -6.2 cell division protein FtsE compare
BWI76_RS00845 -2.1 -8.4 N-acetyl-gamma-glutamyl-phosphate reductase compare
BWI76_RS01615 -2.1 -7.6 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase compare
BWI76_RS17675 -2.1 -1.8 hypothetical protein compare
BWI76_RS18930 -2.1 -3.3 histidinol-phosphate transaminase compare
BWI76_RS14320 -2.1 -1.9 hypothetical protein compare
BWI76_RS22690 -2.1 -1.8 adenylyl-sulfate kinase compare
BWI76_RS27820 -2.1 -0.9 ilvB operon leader peptide IvbL compare
BWI76_RS00345 -2.0 -3.5 protein disulfide oxidoreductase DsbA compare
BWI76_RS08605 -2.0 -1.7 phosphoglyceromutase compare
BWI76_RS21340 -2.0 -1.8 SoxR reducing system protein RseC compare
BWI76_RS25070 -2.0 -1.4 hypothetical protein compare
BWI76_RS24740 -2.0 -3.2 GntR family transcriptional regulator compare
BWI76_RS02530 -2.0 -1.3 tRNA dimethylallyltransferase compare
BWI76_RS01610 -2.0 -9.2 phosphoribosylamine--glycine ligase compare
BWI76_RS12170 -2.0 -2.3 hypothetical protein compare
BWI76_RS09870 -2.0 -3.9 aromatic amino acid aminotransferase compare
BWI76_RS20965 -1.9 -3.7 phosphoribosylformylglycinamidine cyclo-ligase compare
BWI76_RS20360 -1.9 -0.8 cell division protein DedD compare
BWI76_RS23220 -1.9 -7.2 amino-acid N-acetyltransferase compare
BWI76_RS11845 -1.9 -2.5 tryptophan synthase subunit beta compare
BWI76_RS18935 -1.9 -5.1 bifunctional imidazole glycerol-phosphate dehydratase/histidinol phosphatase compare
BWI76_RS11850 -1.9 -7.9 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase compare
BWI76_RS24605 -1.9 -4.8 dihydroxyacetone kinase subunit DhaM compare
BWI76_RS04705 -1.9 -3.8 DNA-binding transcriptional regulator FruR compare
BWI76_RS21460 -1.9 -1.1 translation inhibitor protein RaiA compare
BWI76_RS11980 -1.8 -1.6 DeoR family transcriptional regulator compare
BWI76_RS18940 -1.8 -2.9 imidazole glycerol phosphate synthase subunit HisH compare
BWI76_RS18955 -1.8 -5.3 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase compare
BWI76_RS00180 -1.8 -0.8 F0F1 ATP synthase subunit epsilon compare
BWI76_RS21075 -1.8 -1.6 membrane protein compare
BWI76_RS21070 -1.8 -1.4 outer membrane protein assembly factor BamB compare
BWI76_RS21375 -1.8 -0.8 autonomous glycyl radical cofactor GrcA compare
BWI76_RS22805 -1.8 -8.2 GTP diphosphokinase compare
BWI76_RS24580 -1.8 -3.8 PTS-dependent dihydroxyacetone kinase operon transcriptional regulator DhaR compare
BWI76_RS00600 -1.8 -4.3 LacI family transcriptional regulator compare
BWI76_RS25300 -1.8 -2.8 hybrid sensor histidine kinase/response regulator compare
BWI76_RS16955 -1.8 -0.9 hypothetical protein compare
BWI76_RS27390 -1.8 -3.0 ribonuclease PH compare
BWI76_RS23360 -1.8 -1.5 diaminopimelate decarboxylase compare
BWI76_RS25060 -1.8 -4.8 lipoprotein NlpI compare
BWI76_RS24575 -1.7 -1.6 hypothetical protein compare
BWI76_RS12090 -1.7 -1.7 HNH endonuclease compare
BWI76_RS16480 -1.7 -1.8 lactoylglutathione lyase compare
BWI76_RS16425 -1.7 -2.5 hypothetical protein compare
BWI76_RS11860 -1.7 -5.1 anthranilate synthase component I compare
BWI76_RS01080 -1.7 -5.6 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase compare
BWI76_RS09195 -1.7 -1.0 N-acetyltransferase compare
BWI76_RS15825 -1.7 -0.8 hypothetical protein compare
BWI76_RS14300 -1.7 -2.4 hypothetical protein compare
BWI76_RS11205 -1.7 -2.9 transcription-repair coupling factor compare
BWI76_RS25870 -1.7 -1.2 elongation factor Tu compare
BWI76_RS04525 -1.7 -1.4 4-hydroxythreonine-4-phosphate dehydrogenase PdxA compare
BWI76_RS00975 -1.6 -8.9 dihydroxy-acid dehydratase compare
BWI76_RS18770 -1.6 -1.0 DNA gyrase inhibitor compare
BWI76_RS04305 -1.6 -1.0 molecular chaperone DnaJ compare
BWI76_RS26095 -1.6 -0.7 shikimate kinase compare
BWI76_RS20895 -1.6 -2.7 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
BWI76_RS21580 -1.6 -1.2 SsrA-binding protein compare
BWI76_RS27440 -1.6 -1.1 DNA helicase RecG compare
BWI76_RS11815 -1.6 -1.1 hypothetical protein compare
BWI76_RS22940 -1.6 -1.9 DNA-binding transcriptional activator FucR compare
BWI76_RS11190 -1.5 -1.6 putative TetR/AcrR family transcriptional regulatory protein compare
BWI76_RS18815 -1.5 -1.9 nitrogenase molybdenum-iron protein alpha chain compare
BWI76_RS01110 -1.5 -2.7 TDP-fucosamine acetyltransferase compare
BWI76_RS16920 -1.5 -1.0 3-(2,3-dihydroxyphenyl)propionate dioxygenase compare
BWI76_RS23285 -1.5 -1.8 hypothetical protein compare
BWI76_RS14305 -1.5 -3.6 metallophosphoesterase compare
BWI76_RS09755 -1.5 -2.5 phosphoserine transaminase compare
BWI76_RS21475 -1.5 -2.8 bifunctional chorismate mutase/prephenate dehydrogenase compare
BWI76_RS19730 -1.5 -3.0 1-phosphofructokinase compare
BWI76_RS15110 -1.5 -3.1 putative excinuclease ABC subunit A compare
BWI76_RS07510 -1.5 -2.2 hypothetical protein compare
BWI76_RS21450 -1.5 -1.9 23S rRNA pseudouridine(1911/1915/1917) synthase compare
BWI76_RS14005 -1.5 -1.3 TetR family transcriptional regulator compare
BWI76_RS00850 -1.5 -6.2 acetylglutamate kinase compare
BWI76_RS10575 -1.5 -0.9 polar amino acid ABC transporter permease compare
BWI76_RS10930 -1.5 -4.5 glucan biosynthesis protein G compare
BWI76_RS01125 -1.5 -4.1 4-alpha-L-fucosyltransferase compare
BWI76_RS17290 -1.5 -3.3 formyltetrahydrofolate deformylase compare
BWI76_RS07820 -1.4 -1.8 S-methyl-5-thioribose kinase compare
BWI76_RS05120 -1.4 -4.1 bifunctional glycosyl transferase/transpeptidase compare
BWI76_RS09625 -1.4 -0.9 hypothetical protein compare
BWI76_RS17775 -1.4 -2.3 hypothetical protein compare
BWI76_RS10055 -1.4 -2.1 AraC family transcriptional regulator compare
BWI76_RS05450 -1.4 -0.6 ribonuclease HI compare
BWI76_RS24850 -1.4 -4.5 DeoR family transcriptional regulator compare
BWI76_RS00355 -1.4 -0.9 DNA polymerase I compare
BWI76_RS19615 -1.4 -2.2 vancomycin high temperature exclusion protein compare
BWI76_RS03225 -1.4 -4.2 transcriptional regulator compare
BWI76_RS08430 -1.4 -4.0 succinate--CoA ligase subunit alpha compare
BWI76_RS06475 -1.4 -1.2 protoheme IX farnesyltransferase compare
BWI76_RS15360 -1.4 -1.8 hypothetical protein compare
BWI76_RS02725 -1.4 -0.8 HxlR family transcriptional regulator compare
BWI76_RS00715 -1.4 -0.9 two-component sensor histidine kinase compare
BWI76_RS15650 -1.4 -4.5 gp5 compare
BWI76_RS02815 -1.4 -1.3 fructose-bisphosphatase class I compare
BWI76_RS05515 -1.4 -2.6 NADH:ubiquinone reductase (Na(+)-transporting) subunit F compare
BWI76_RS26410 -1.3 -1.3 membrane protein compare
BWI76_RS23125 -1.3 -2.1 propanediol dehydratase small subunit compare
BWI76_RS17720 -1.3 -0.4 muramoyltetrapeptide carboxypeptidase compare
BWI76_RS12050 -1.3 -2.7 hypothetical protein compare
BWI76_RS01185 -1.3 -0.9 adenylate cyclase compare
BWI76_RS23480 -1.3 -9.4 EAL domain-containing protein compare
BWI76_RS10350 -1.3 -5.2 EamA family transporter compare
BWI76_RS09110 -1.3 -1.8 glutathione ABC transporter permease GsiD compare
BWI76_RS06485 -1.3 -1.7 cytochrome o ubiquinol oxidase subunit III compare
BWI76_RS26440 -1.3 -0.9 hypothetical protein compare
BWI76_RS00990 -1.3 -5.6 ketol-acid reductoisomerase compare
BWI76_RS24275 -1.3 -2.1 biopolymer transport protein ExbD compare
BWI76_RS09825 -1.3 -3.8 envelope biogenesis factor ElyC compare
BWI76_RS18925 -1.3 -2.6 histidinol dehydrogenase compare
BWI76_RS23490 -1.3 -3.2 fimbrial protein compare
BWI76_RS20380 -1.3 -0.5 tRNA pseudouridine(38-40) synthase TruA compare
BWI76_RS14570 -1.3 -2.2 hypothetical protein compare
BWI76_RS26665 -1.3 -2.1 DNA-binding response regulator compare
BWI76_RS06730 -1.3 -1.3 lac repressor compare
BWI76_RS09530 -1.3 -1.1 hypothetical protein compare
BWI76_RS19685 -1.3 -3.2 lysine transporter compare
BWI76_RS24595 -1.2 -2.4 dihydroxyacetone kinase subunit DhaK compare
BWI76_RS19010 -1.2 -2.0 polysaccharide pyruvyl transferase yvff compare
BWI76_RS09735 -1.2 -3.2 formate acetyltransferase compare
BWI76_RS00400 -1.2 -0.6 glutamine synthetase compare
BWI76_RS08425 -1.2 -2.1 succinyl-CoA ligase subunit beta compare
BWI76_RS23580 -1.2 -2.0 hypothetical protein compare
BWI76_RS09655 -1.2 -3.3 leucine-responsive regulatory protein compare
BWI76_RS13560 -1.2 -0.6 amino acid ABC transporter substrate-binding subunit compare
BWI76_RS26075 -1.2 -0.8 DNA adenine methylase compare
BWI76_RS12535 -1.2 -3.6 hypothetical protein compare
BWI76_RS18240 -1.2 -1.5 L-arabinose ABC transporter permease AraH compare
BWI76_RS08495 -1.2 -2.6 cytochrome bd-I ubiquinol oxidase subunit I compare
BWI76_RS15690 -1.2 -2.4 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Klebsiella michiganensis M5al in mixed community experiments

For mixed community Mixed culture; Pseudomonas simiae WCS417 3:1 starting OD to Klebsiella across organisms