Experiment set14IT042 for Klebsiella michiganensis M5al

Compare to:

RCH2_defined_noCarbon with Mixed culture; Pseudomonas simiae WCS417 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x

200 most detrimental genes:

  gene name fitness t score description  
BWI76_RS23895 +2.6 2.7 Xaa-Pro aminopeptidase compare
BWI76_RS00025 +2.0 2.6 hypothetical protein compare
BWI76_RS11430 +1.7 1.8 lipoprotein compare
BWI76_RS18675 +1.5 2.6 fimbrial protein compare
BWI76_RS15350 +1.3 1.5 hypothetical protein compare
BWI76_RS14775 +1.3 3.3 creatinine amidohydrolase compare
BWI76_RS23705 +1.3 2.9 2-deoxy-D-ribonyl-CoA 3-dehydrogenase (from data) compare
BWI76_RS13215 +1.2 2.1 type I glyceraldehyde-3-phosphate dehydrogenase compare
BWI76_RS11810 +1.2 1.9 outer membrane protein OmpW compare
BWI76_RS18130 +1.2 3.6 zinc ABC transporter substrate-binding protein compare
BWI76_RS14670 +1.2 1.4 hypothetical protein compare
BWI76_RS21165 +1.1 1.7 Fe-S cluster assembly transcriptional regulator IscR compare
BWI76_RS24885 +1.1 0.9 PTS galactitol transporter subunit IIB compare
BWI76_RS11675 +1.1 2.9 arginine N-succinyltransferase compare
BWI76_RS07780 +1.1 1.4 hypothetical protein compare
BWI76_RS11515 +1.1 1.3 peptide-methionine (R)-S-oxide reductase compare
BWI76_RS07185 +1.1 1.1 hypothetical protein compare
BWI76_RS03595 +1.1 2.0 ethanolamine utilization protein EutM compare
BWI76_RS14805 +1.1 1.4 hypothetical protein compare
BWI76_RS23195 +1.0 2.3 ethanolamine utilization protein EutP compare
BWI76_RS16210 +1.0 1.4 hypothetical protein compare
BWI76_RS11780 +1.0 1.8 2-deoxyglucose-6-phosphatase compare
BWI76_RS23255 +1.0 3.3 prepilin-type cleavage/methylation domain-containing protein compare
BWI76_RS19310 +1.0 2.8 ABC transporter permease compare
BWI76_RS03045 +1.0 1.8 hypothetical protein compare
BWI76_RS20900 +1.0 1.3 outer membrane protein assembly factor BamC compare
BWI76_RS08765 +1.0 2.1 8-amino-7-oxononanoate synthase compare
BWI76_RS19935 +1.0 1.7 hypothetical protein compare
BWI76_RS16880 +1.0 2.6 GlpE family protein compare
BWI76_RS14435 +1.0 1.2 glutamine ABC transporter ATP-binding protein compare
BWI76_RS09960 +1.0 1.7 Lon protease compare
BWI76_RS15260 +1.0 1.2 hypothetical protein compare
BWI76_RS14980 +1.0 1.4 hypothetical protein compare
BWI76_RS09450 +1.0 2.3 30S ribosomal protein S6--L-glutamate ligase compare
BWI76_RS21245 +1.0 1.4 nitrogen regulatory protein P-II compare
BWI76_RS13205 +0.9 4.2 hypothetical protein compare
BWI76_RS02695 +0.9 1.9 peptidyl-prolyl cis-trans isomerase compare
BWI76_RS20765 +0.9 3.1 ethanolamine ammonia lyase large subunit compare
BWI76_RS24080 +0.9 2.0 DUF179 domain-containing protein compare
BWI76_RS03850 +0.9 1.7 2-oxo-hepta-3-ene-1,7-dioic acid hydratase compare
BWI76_RS24035 +0.9 1.7 hypothetical protein compare
BWI76_RS17400 +0.9 1.1 transporter compare
BWI76_RS16335 +0.9 1.4 division septum protein Blr compare
BWI76_RS26405 +0.9 1.1 16S rRNA (guanine(966)-N(2))-methyltransferase compare
BWI76_RS16360 +0.9 1.0 electron transport complex subunit RsxB compare
BWI76_RS01030 +0.9 2.6 cytosine/purine, uracil, thiamine, allantoin permease family protein compare
BWI76_RS11435 +0.9 1.6 hypothetical protein compare
BWI76_RS11680 +0.9 3.5 succinylglutamate-semialdehyde dehydrogenase compare
BWI76_RS14765 +0.9 3.3 PTS lactose/cellobiose transporter subunit IIB compare
BWI76_RS05570 +0.9 0.8 hypothetical protein compare
BWI76_RS07985 +0.9 0.9 fluoride ion transporter CrcB compare
BWI76_RS10570 +0.9 1.8 cysteine ABC transporter substrate-binding protein compare
BWI76_RS19330 +0.9 0.7 HAD family hydrolase compare
BWI76_RS24810 +0.9 3.2 hypothetical protein compare
BWI76_RS27940 +0.9 1.6 2-dehydro-3-deoxy-6-phosphogalactonate aldolase compare
BWI76_RS25905 +0.9 2.8 hypothetical protein compare
BWI76_RS14075 +0.8 0.8 TetR family transcriptional regulator compare
BWI76_RS06135 +0.8 1.9 MFS transporter compare
BWI76_RS07255 +0.8 1.9 hypothetical protein compare
BWI76_RS17390 +0.8 1.6 DsrE family protein compare
BWI76_RS15035 +0.8 1.3 metal ABC transporter permease compare
BWI76_RS12585 +0.8 2.8 transcriptional regulator compare
BWI76_RS02940 +0.8 2.0 RpiR family transcriptional regulator compare
BWI76_RS25925 +0.8 1.1 hypothetical protein compare
BWI76_RS03040 +0.8 2.4 leucyl aminopeptidase compare
BWI76_RS23050 +0.8 1.6 cobalt-precorrin-3B C(17)-methyltransferase compare
BWI76_RS10725 +0.8 2.2 hypothetical protein compare
BWI76_RS11350 +0.8 3.2 DeoR family transcriptional regulator compare
BWI76_RS13435 +0.8 0.9 hypothetical protein compare
BWI76_RS11790 +0.8 1.9 acyl-CoA thioesterase compare
BWI76_RS12875 +0.8 2.6 bifunctional deaminase-reductase compare
BWI76_RS09390 +0.8 2.8 phage tail protein compare
BWI76_RS14035 +0.8 2.0 ABC transporter ATPase compare
BWI76_RS25545 +0.8 1.7 hypothetical protein compare
BWI76_RS14965 +0.8 4.3 AraC family transcriptional regulator compare
BWI76_RS12465 +0.8 1.1 phage shock protein D compare
BWI76_RS04805 +0.8 2.6 8-oxo-dGTP diphosphatase compare
BWI76_RS04840 +0.8 2.0 prepilin peptidase-dependent pilin compare
BWI76_RS01995 +0.8 1.3 AraC family transcriptional regulator compare
BWI76_RS18390 +0.8 1.3 hypothetical protein compare
BWI76_RS16760 +0.8 2.0 lipase compare
BWI76_RS11345 +0.8 2.6 LysR family transcriptional regulator compare
BWI76_RS14750 +0.8 2.6 transcriptional regulator compare
BWI76_RS13245 +0.7 1.6 DNA-damage-inducible protein I compare
BWI76_RS17190 +0.7 1.2 TonB system transport protein TonB compare
BWI76_RS24925 +0.7 2.1 DnaA initiator-associating protein DiaA compare
BWI76_RS07705 +0.7 1.6 enterochelin esterase compare
BWI76_RS19465 +0.7 2.0 hypothetical protein compare
BWI76_RS24945 +0.7 1.3 glutamine amidotransferase compare
BWI76_RS12940 +0.7 1.4 AraC family transcriptional regulator compare
BWI76_RS04915 +0.7 1.6 hypothetical protein compare
BWI76_RS15270 +0.7 2.7 phenazine biosynthesis protein PhzF family compare
BWI76_RS20430 +0.7 2.4 penicillin-insensitive murein endopeptidase compare
BWI76_RS23250 +0.7 1.9 hypothetical protein compare
BWI76_RS13945 +0.7 2.8 lysine exporter protein LysE/YggA compare
BWI76_RS21115 +0.7 1.5 3-mercaptopyruvate sulfurtransferase compare
BWI76_RS04010 +0.7 2.9 hypothetical protein compare
BWI76_RS07350 +0.7 2.7 alcohol dehydrogenase compare
BWI76_RS20295 +0.7 2.8 dihydroneopterin triphosphate 2'-epimerase compare
BWI76_RS24965 +0.7 2.8 SCP2 domain-containing protein compare
BWI76_RS19360 +0.7 3.2 glucose dehydrogenase compare
BWI76_RS13095 +0.7 1.4 phenylacetate-CoA oxygenase subunit PaaB compare
BWI76_RS15050 +0.7 1.9 sugar transporter compare
BWI76_RS16075 +0.7 1.1 oxidoreductase compare
BWI76_RS17945 +0.7 1.0 hypothetical protein compare
BWI76_RS04700 +0.7 1.6 acetolactate synthase small subunit compare
BWI76_RS10400 +0.7 1.5 hypothetical protein compare
BWI76_RS13640 +0.7 2.8 binding-protein-dependent transport system inner membrane protein compare
BWI76_RS09065 +0.7 2.8 sugar phosphatase SupH compare
BWI76_RS03560 +0.7 2.4 propanediol utilization phosphotransacylase compare
BWI76_RS11835 +0.7 1.4 putative regulatory protein MarR compare
BWI76_RS20795 +0.7 1.0 ethanolamine catabolic microcompartment shell protein EutN compare
BWI76_RS26030 +0.7 3.1 cytosine deaminase compare
BWI76_RS04095 +0.7 1.2 dUMP phosphatase compare
BWI76_RS25945 +0.7 3.5 ABC transporter ATP-binding protein compare
BWI76_RS18870 +0.7 1.3 protein NifZ compare
BWI76_RS27735 +0.7 2.2 hypothetical protein compare
BWI76_RS20800 +0.7 1.6 carboxysome shell protein compare
BWI76_RS27875 +0.7 1.1 membrane protein compare
BWI76_RS23005 +0.7 1.7 bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase compare
BWI76_RS14780 +0.7 2.0 phosphotriesterase compare
BWI76_RS07725 +0.7 0.8 iron-enterobactin transporter permease compare
BWI76_RS01620 +0.6 1.9 hypothetical protein compare
BWI76_RS10275 +0.6 3.0 ABC transporter compare
BWI76_RS15740 +0.6 0.8 HNH endonuclease compare
BWI76_RS25285 +0.6 0.7 HPr family phosphocarrier protein compare
BWI76_RS10505 +0.6 2.7 putative guanine/xanthin permease compare
BWI76_RS12825 +0.6 1.6 hypothetical protein compare
BWI76_RS06595 +0.6 1.4 hypothetical protein compare
BWI76_RS01585 +0.6 2.7 transcriptional regulator compare
BWI76_RS20710 +0.6 1.8 dyp-type peroxidase family protein compare
BWI76_RS18005 +0.6 2.4 hypothetical protein compare
BWI76_RS23960 +0.6 2.3 oxidative stress defense protein compare
BWI76_RS01355 +0.6 2.5 hypothetical protein compare
BWI76_RS16645 +0.6 1.6 DeoR family transcriptional regulator compare
BWI76_RS04530 +0.6 0.9 peptidylprolyl isomerase SurA compare
BWI76_RS15135 +0.6 2.1 hypothetical protein compare
BWI76_RS16655 +0.6 2.2 CatA-like O-acetyltransferase compare
BWI76_RS19480 +0.6 1.9 transcriptional regulator compare
BWI76_RS15970 +0.6 1.7 carboxypeptidase M32 compare
BWI76_RS14955 +0.6 2.1 peptidase M17 leucyl aminopeptidase domain-containing protein compare
BWI76_RS19955 +0.6 2.1 glycerophosphoryl diester phosphodiesterase compare
BWI76_RS20930 +0.6 1.4 arsenate reductase (glutaredoxin) compare
BWI76_RS16750 +0.6 3.9 acetolactate synthase compare
BWI76_RS19750 +0.6 2.4 elongation factor P-like protein YeiP compare
BWI76_RS12550 +0.6 0.9 hypothetical protein compare
BWI76_RS11865 +0.6 1.1 phosphatase compare
BWI76_RS20220 +0.6 3.3 sugar phosphatase compare
BWI76_RS10560 +0.6 2.7 gamma-glutamyltransferase compare
BWI76_RS22965 +0.6 1.8 cysteine sulfinate desulfinase compare
BWI76_RS23785 +0.6 3.7 hypothetical protein compare
BWI76_RS09710 +0.6 1.8 transketolase compare
BWI76_RS15080 +0.6 5.2 hypothetical protein compare
BWI76_RS25915 +0.6 1.9 protein SlyX compare
BWI76_RS05525 +0.6 1.8 glycerophosphodiester phosphodiesterase compare
BWI76_RS15220 +0.6 1.7 L-lactate dehydrogenase compare
BWI76_RS16015 +0.6 1.4 pheromone autoinducer 2 transporter compare
BWI76_RS07615 +0.6 2.6 betaine-aldehyde dehydrogenase compare
BWI76_RS13625 +0.6 1.5 hypothetical protein compare
BWI76_RS03810 +0.6 2.9 GTPase compare
BWI76_RS04875 +0.6 3.3 transcriptional regulator PdhR compare
BWI76_RS23595 +0.6 2.1 N-acetyltransferase compare
BWI76_RS17715 +0.6 2.4 murein transglycosylase compare
BWI76_RS20230 +0.6 0.8 hypothetical protein compare
BWI76_RS02800 +0.6 1.5 ABC transporter compare
BWI76_RS17380 +0.6 1.7 nitrate transporter component compare
BWI76_RS21275 +0.6 2.9 lytic transglycosylase F compare
BWI76_RS09130 +0.6 1.2 biofilm formation regulatory protein BssR compare
BWI76_RS02180 +0.6 0.8 hypothetical protein compare
BWI76_RS09150 +0.6 1.4 DNA-binding transcriptional repressor DeoR compare
BWI76_RS07475 +0.6 1.0 DNA-binding transcriptional regulator RamA compare
BWI76_RS01010 +0.6 3.0 uridine phosphorylase compare
BWI76_RS00085 +0.6 2.0 hypothetical protein compare
BWI76_RS10365 +0.6 2.3 class IV aminotransferase compare
BWI76_RS23820 +0.6 2.0 flavodoxin FldB compare
BWI76_RS08850 +0.6 2.5 cardiolipin synthase B compare
BWI76_RS10270 +0.6 2.8 acetylornithine deacetylase compare
BWI76_RS21040 +0.6 1.5 peptidase M4 compare
BWI76_RS18360 +0.6 1.0 aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase family protein compare
BWI76_RS19895 +0.6 2.1 bifunctional transcriptional regulator/O6-methylguanine-DNA methyltransferase compare
BWI76_RS18175 +0.6 1.9 hydrolase compare
BWI76_RS14930 +0.6 1.2 hypothetical protein compare
BWI76_RS12625 +0.6 2.6 isoflavone reductase compare
BWI76_RS23065 +0.6 1.7 cobalt-precorrin-6Y C(15)-methyltransferase compare
BWI76_RS12490 +0.6 2.6 AbrB family transcriptional regulator compare
BWI76_RS01000 +0.6 1.9 peptidyl-prolyl cis-trans isomerase compare
BWI76_RS23860 +0.6 1.2 protein disulfide oxidoreductase compare
BWI76_RS13745 +0.6 1.5 formate dehydrogenase subunit beta compare
BWI76_RS04990 +0.6 1.3 pantoate--beta-alanine ligase compare
BWI76_RS13730 +0.6 1.5 hypothetical protein compare
BWI76_RS07790 +0.6 1.2 plasmid stabilization protein compare
BWI76_RS05870 +0.6 2.7 ABC transporter compare
BWI76_RS09640 +0.6 1.1 cysteine/glutathione ABC transporter permease/ATP-binding protein CydD compare
BWI76_RS16925 +0.6 2.8 3-(3-hydroxyphenyl)propionate hydroxylase compare
BWI76_RS02745 +0.6 0.7 hypothetical protein compare
BWI76_RS11750 +0.6 1.5 chitooligosaccharide deacetylase compare
BWI76_RS27605 +0.6 1.4 hypothetical protein compare
BWI76_RS12665 +0.6 0.9 hypothetical protein compare
BWI76_RS06280 +0.6 2.9 hypothetical protein compare
BWI76_RS01815 +0.6 1.7 phosphate-starvation-inducible protein PsiE compare


Specific Phenotypes

None in this experiment

For Klebsiella michiganensis M5al in mixed community experiments

For mixed community Mixed culture; Pseudomonas simiae WCS417 3:1 starting OD to Klebsiella across organisms