Experiment set14IT041 for Klebsiella michiganensis M5al

Compare to:

RCH2_defined_noCarbon with Mixed culture; Sinorhizobium meliloti 1021 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x

200 most important genes:

  gene name fitness t score description  
BWI76_RS08395 -5.2 -1.8 succinate dehydrogenase cytochrome b556 large subunit compare
BWI76_RS18920 -5.1 -3.4 ATP phosphoribosyltransferase compare
BWI76_RS17975 -4.9 -3.4 tail-specific protease compare
BWI76_RS26455 -4.3 -2.1 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase compare
BWI76_RS15605 -4.3 -2.1 hypothetical protein compare
BWI76_RS23265 -3.9 -1.8 hypothetical protein compare
BWI76_RS18950 -3.9 -5.1 imidazole glycerol phosphate synthase cyclase subunit compare
BWI76_RS08520 -3.8 -2.1 colicin transporter TolQ compare
BWI76_RS17980 -3.8 -3.2 RNA chaperone ProQ compare
BWI76_RS05840 -3.7 -2.5 glutamate 5-kinase compare
BWI76_RS00975 -3.6 -10.5 dihydroxy-acid dehydratase compare
BWI76_RS07070 -3.6 -3.7 5-(carboxyamino)imidazole ribonucleotide mutase compare
BWI76_RS00845 -3.6 -9.4 N-acetyl-gamma-glutamyl-phosphate reductase compare
BWI76_RS09760 -3.6 -2.4 3-phosphoshikimate 1-carboxyvinyltransferase compare
BWI76_RS16965 -3.5 -2.3 murein lipoprotein compare
BWI76_RS20440 -3.5 -3.5 50S ribosomal protein L3 N(5)-glutamine methyltransferase compare
BWI76_RS18935 -3.5 -6.6 bifunctional imidazole glycerol-phosphate dehydratase/histidinol phosphatase compare
BWI76_RS23365 -3.5 -4.6 LysR family transcriptional regulator compare
BWI76_RS18925 -3.5 -6.6 histidinol dehydrogenase compare
BWI76_RS04255 -3.5 -10.5 threonine synthase compare
BWI76_RS04240 -3.4 -1.2 thr operon leader peptide compare
BWI76_RS12070 -3.4 -1.1 hypothetical protein compare
BWI76_RS07065 -3.4 -8.9 5-(carboxyamino)imidazole ribonucleotide synthase compare
BWI76_RS04160 -3.4 -2.3 phosphoserine phosphatase compare
BWI76_RS21565 -3.3 -1.1 outer membrane protein assembly factor BamE compare
BWI76_RS05015 -3.3 -2.2 transcriptional regulator compare
BWI76_RS00990 -3.3 -7.5 ketol-acid reductoisomerase compare
BWI76_RS21070 -3.3 -1.9 outer membrane protein assembly factor BamB compare
BWI76_RS20965 -3.3 -3.5 phosphoribosylformylglycinamidine cyclo-ligase compare
BWI76_RS11300 -3.3 -1.1 cupin compare
BWI76_RS01610 -3.2 -8.1 phosphoribosylamine--glycine ligase compare
BWI76_RS25960 -3.2 -3.1 NUDIX hydrolase compare
BWI76_RS01615 -3.2 -7.8 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase compare
BWI76_RS20355 -3.2 -2.9 colicin V production protein compare
BWI76_RS00855 -3.2 -9.8 argininosuccinate lyase compare
BWI76_RS04250 -3.2 -7.3 homoserine kinase compare
BWI76_RS08530 -3.2 -1.5 protein TolA compare
BWI76_RS20350 -3.2 -6.5 amidophosphoribosyltransferase compare
BWI76_RS22760 -3.2 -6.7 sulfite reductase subunit beta compare
BWI76_RS18940 -3.2 -6.8 imidazole glycerol phosphate synthase subunit HisH compare
BWI76_RS25335 -3.1 -1.8 stringent starvation protein A compare
BWI76_RS02995 -3.1 -7.8 aspartate carbamoyltransferase compare
BWI76_RS21660 -3.1 -1.5 antirestriction protein compare
BWI76_RS00980 -3.1 -10.7 PLP-dependent threonine dehydratase compare
BWI76_RS03010 -3.1 -9.4 ornithine carbamoyltransferase compare
BWI76_RS11635 -3.1 -1.4 ABC transporter compare
BWI76_RS01095 -3.1 -2.2 UDP-N-acetyl-D-mannosamine dehydrogenase compare
BWI76_RS26460 -3.1 -3.6 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
BWI76_RS10990 -3.0 -2.9 dihydroorotase compare
BWI76_RS04245 -3.0 -11.6 bifunctional aspartate kinase/homoserine dehydrogenase I compare
BWI76_RS23220 -3.0 -8.5 amino-acid N-acetyltransferase compare
BWI76_RS20360 -3.0 -1.0 cell division protein DedD compare
BWI76_RS10745 -3.0 -1.0 hypothetical protein compare
BWI76_RS18930 -3.0 -4.1 histidinol-phosphate transaminase compare
BWI76_RS22690 -3.0 -2.7 adenylyl-sulfate kinase compare
BWI76_RS05835 -3.0 -2.0 gamma-glutamyl-phosphate reductase compare
BWI76_RS21265 -2.9 -9.9 phosphoribosylformylglycinamidine synthase compare
BWI76_RS00850 -2.9 -6.5 acetylglutamate kinase compare
BWI76_RS04465 -2.9 -5.4 carbamoyl-phosphate synthase small subunit compare
BWI76_RS04665 -2.9 -14.7 3-isopropylmalate dehydratase small subunit compare
BWI76_RS14065 -2.9 -2.2 hypothetical protein compare
BWI76_RS04670 -2.8 -9.4 3-isopropylmalate dehydratase large subunit compare
BWI76_RS22755 -2.8 -3.7 phosphoadenosine phosphosulfate reductase compare
BWI76_RS01655 -2.8 -8.1 homoserine O-succinyltransferase compare
BWI76_RS07465 -2.7 -1.3 TetR family transcriptional regulator compare
BWI76_RS21075 -2.7 -1.5 membrane protein compare
BWI76_RS00805 -2.7 -3.6 5,10-methylenetetrahydrofolate reductase compare
BWI76_RS21465 -2.7 -4.8 bifunctional chorismate mutase/prephenate dehydratase compare
BWI76_RS00835 -2.7 -9.3 phosphoenolpyruvate carboxylase compare
BWI76_RS08385 -2.7 -3.1 citrate (Si)-synthase compare
BWI76_RS09755 -2.6 -1.8 phosphoserine transaminase compare
BWI76_RS06535 -2.6 -1.8 endopeptidase La compare
BWI76_RS21475 -2.6 -3.5 bifunctional chorismate mutase/prephenate dehydrogenase compare
BWI76_RS01350 -2.6 -0.9 NAD(P)H-flavin reductase compare
BWI76_RS04470 -2.6 -8.5 carbamoyl phosphate synthase large subunit compare
BWI76_RS25645 -2.6 -5.1 shikimate dehydrogenase compare
BWI76_RS04675 -2.5 -5.5 3-isopropylmalate dehydrogenase compare
BWI76_RS01800 -2.5 -1.7 glucose-6-phosphate isomerase compare
BWI76_RS11850 -2.5 -7.0 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase compare
BWI76_RS09910 -2.5 -11.3 dihydroorotate dehydrogenase (quinone) compare
BWI76_RS26470 -2.5 -4.1 4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase compare
BWI76_RS11840 -2.5 -4.3 tryptophan synthase subunit alpha compare
BWI76_RS24285 -2.5 -7.3 cystathionine beta-lyase compare
BWI76_RS20490 -2.5 -1.7 hypothetical protein compare
BWI76_RS22765 -2.5 -8.0 sulfite reductase subunit alpha compare
BWI76_RS08210 -2.5 -1.1 N-acetylglucosamine-6-phosphate deacetylase compare
BWI76_RS21450 -2.5 -2.2 23S rRNA pseudouridine(1911/1915/1917) synthase compare
BWI76_RS23920 -2.4 -2.3 D-3-phosphoglycerate dehydrogenase compare
BWI76_RS01630 -2.4 -1.1 16S ribosomal RNA compare
BWI76_RS08535 -2.4 -1.3 translocation protein TolB compare
BWI76_RS21580 -2.4 -1.3 SsrA-binding protein compare
BWI76_RS09335 -2.4 -1.1 baseplate assembly protein W compare
BWI76_RS01190 -2.4 -1.6 iron donor protein CyaY compare
BWI76_RS18955 -2.3 -2.7 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase compare
BWI76_RS26390 -2.3 -6.3 cell division protein FtsX compare
BWI76_RS27390 -2.3 -4.2 ribonuclease PH compare
BWI76_RS11520 -2.3 -1.1 hypothetical protein compare
BWI76_RS26395 -2.2 -5.6 cell division protein FtsE compare
BWI76_RS08525 -2.2 -1.7 colicin transporter compare
BWI76_RS04680 -2.2 -9.1 2-isopropylmalate synthase compare
BWI76_RS09255 -2.2 -2.8 hypothetical protein compare
BWI76_RS04685 -2.1 -7.4 putative leucine operon leader peptide compare
BWI76_RS25115 -2.1 -6.3 argininosuccinate synthase compare
BWI76_RS20135 -2.1 -3.5 NADH-quinone oxidoreductase subunit M compare
BWI76_RS00985 -2.1 -5.6 transcriptional regulator IlvY compare
BWI76_RS12400 -2.1 -5.4 TetR family transcriptional regulator compare
BWI76_RS00240 -2.1 -1.3 FMN-binding protein MioC compare
BWI76_RS25060 -2.1 -5.3 lipoprotein NlpI compare
BWI76_RS21310 -2.1 -1.2 DNA repair protein RecO compare
BWI76_RS00785 -2.1 -5.0 cystathionine gamma-synthase compare
BWI76_RS16935 -2.0 -1.3 shikimate dehydrogenase compare
BWI76_RS00875 -2.0 -3.8 DNA-binding transcriptional regulator FabR compare
BWI76_RS19770 -2.0 -1.1 bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase compare
BWI76_RS01795 -2.0 -2.4 hypothetical protein compare
BWI76_RS11965 -2.0 -2.4 orotidine-5'-phosphate decarboxylase compare
BWI76_RS07640 -2.0 -1.4 short chain dehydrogenase compare
BWI76_RS12745 -1.9 -2.9 putative prophage membrane protein compare
BWI76_RS02815 -1.9 -1.4 fructose-bisphosphatase class I compare
BWI76_RS21350 -1.9 -1.4 anti-RNA polymerase sigma factor SigE compare
BWI76_RS20280 -1.9 -2.7 phosphodiesterase compare
BWI76_RS20640 -1.9 -3.3 cysteine synthase A compare
BWI76_RS20150 -1.9 -2.0 NADH:ubiquinone oxidoreductase subunit J compare
BWI76_RS11845 -1.9 -2.1 tryptophan synthase subunit beta compare
BWI76_RS22805 -1.9 -7.0 GTP diphosphokinase compare
BWI76_RS11860 -1.9 -6.4 anthranilate synthase component I compare
BWI76_RS21460 -1.9 -1.0 translation inhibitor protein RaiA compare
BWI76_RS04645 -1.9 -2.4 3-dehydroquinase compare
BWI76_RS13025 -1.8 -4.8 histidine phosphatase family protein compare
BWI76_RS01220 -1.8 -4.3 DNA-dependent helicase II compare
BWI76_RS24605 -1.8 -4.0 dihydroxyacetone kinase subunit DhaM compare
BWI76_RS00720 -1.8 -1.6 DNA-binding response regulator compare
BWI76_RS05915 -1.8 -2.4 helix-turn-helix transcriptional regulator compare
BWI76_RS20895 -1.8 -3.3 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
BWI76_RS19840 -1.8 -0.6 hypothetical protein compare
BWI76_RS10935 -1.8 -3.3 glucan biosynthesis glucosyltransferase H compare
BWI76_RS02530 -1.8 -1.2 tRNA dimethylallyltransferase compare
BWI76_RS22090 -1.7 -1.5 transcriptional regulator compare
BWI76_RS19685 -1.7 -3.2 lysine transporter compare
BWI76_RS09730 -1.7 -0.8 pyruvate formate lyase 1-activating protein compare
BWI76_RS13585 -1.7 -2.8 4-oxalocrotonate tautomerase compare
BWI76_RS04270 -1.7 -3.0 transaldolase compare
BWI76_RS25280 -1.7 -0.9 RNase adaptor protein RapZ compare
BWI76_RS00180 -1.7 -0.8 F0F1 ATP synthase subunit epsilon compare
BWI76_RS02340 -1.6 -3.5 membrane protein FxsA compare
BWI76_RS25300 -1.6 -2.5 hybrid sensor histidine kinase/response regulator compare
BWI76_RS01110 -1.6 -3.0 TDP-fucosamine acetyltransferase compare
BWI76_RS08205 -1.6 -3.3 DNA-binding transcriptional dual regulator NagC compare
BWI76_RS13490 -1.6 -2.8 pyrimidine-specific ribonucleoside hydrolase RihA compare
BWI76_RS25705 -1.6 -3.1 hypothetical protein compare
BWI76_RS11855 -1.6 -7.5 bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase compare
BWI76_RS09650 -1.6 -3.9 hypothetical protein compare
BWI76_RS20140 -1.6 -3.4 NADH-quinone oxidoreductase subunit L compare
BWI76_RS16490 -1.6 -1.1 glutaredoxin compare
BWI76_RS12495 -1.6 -0.9 2-Cys peroxiredoxin compare
BWI76_RS19730 -1.5 -2.5 1-phosphofructokinase compare
BWI76_RS12335 -1.5 -4.2 hypothetical protein compare
BWI76_RS24580 -1.5 -3.0 PTS-dependent dihydroxyacetone kinase operon transcriptional regulator DhaR compare
BWI76_RS18165 -1.5 -1.0 NUDIX pyrophosphatase compare
BWI76_RS05120 -1.5 -4.2 bifunctional glycosyl transferase/transpeptidase compare
BWI76_RS09655 -1.5 -2.2 leucine-responsive regulatory protein compare
BWI76_RS25070 -1.5 -1.1 hypothetical protein compare
BWI76_RS23480 -1.5 -9.9 EAL domain-containing protein compare
BWI76_RS27385 -1.5 -3.6 orotate phosphoribosyltransferase compare
BWI76_RS23360 -1.5 -1.3 diaminopimelate decarboxylase compare
BWI76_RS19460 -1.5 -1.8 lipoprotein compare
BWI76_RS00355 -1.5 -0.7 DNA polymerase I compare
BWI76_RS16375 -1.5 -1.7 electron transport complex subunit G compare
BWI76_RS09735 -1.5 -3.0 formate acetyltransferase compare
BWI76_RS24900 -1.4 -0.9 DeoR family transcriptional regulator compare
BWI76_RS09190 -1.4 -1.3 hypothetical protein compare
BWI76_RS12320 -1.4 -5.0 hypothetical protein compare
BWI76_RS08425 -1.4 -2.7 succinyl-CoA ligase subunit beta compare
BWI76_RS25870 -1.4 -1.0 elongation factor Tu compare
BWI76_RS21675 -1.4 -0.6 hypothetical protein compare
BWI76_RS16275 -1.4 -2.2 fumarate hydratase FumA compare
BWI76_RS09970 -1.4 -0.9 porin OmpA compare
BWI76_RS26000 -1.4 -4.6 aspartate aminotransferase family protein compare
BWI76_RS15530 -1.4 -2.2 hypothetical protein compare
BWI76_RS24400 -1.4 -1.6 outer membrane channel protein TolC compare
BWI76_RS09825 -1.4 -3.8 envelope biogenesis factor ElyC compare
BWI76_RS01080 -1.4 -5.6 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase compare
BWI76_RS16910 -1.4 -1.7 2-keto-4-pentenoate hydratase compare
BWI76_RS21680 -1.4 -1.9 antitoxin of the YeeV-YeeU toxin-antitoxin system compare
BWI76_RS16230 -1.4 -1.4 dihydromonapterin reductase compare
BWI76_RS08430 -1.4 -3.3 succinate--CoA ligase subunit alpha compare
BWI76_RS12300 -1.4 -4.4 hypothetical protein compare
BWI76_RS02735 -1.3 -1.6 3'(2'),5'-bisphosphate nucleotidase CysQ compare
BWI76_RS21795 -1.3 -2.5 EAL domain-containing protein compare
BWI76_RS15825 -1.3 -0.6 hypothetical protein compare
BWI76_RS07510 -1.3 -1.3 hypothetical protein compare
BWI76_RS14005 -1.3 -1.0 TetR family transcriptional regulator compare
BWI76_RS21740 -1.3 -2.7 transcriptional regulator, LysR family protein compare
BWI76_RS25920 -1.3 -1.0 peptidylprolyl isomerase compare
BWI76_RS06680 -1.3 -0.8 hypothetical protein compare
BWI76_RS15680 -1.3 -3.3 hypothetical protein compare
BWI76_RS04100 -1.3 -2.0 peptide chain release factor 3 compare
BWI76_RS01125 -1.3 -2.3 4-alpha-L-fucosyltransferase compare
BWI76_RS06730 -1.3 -1.5 lac repressor compare
BWI76_RS00390 -1.3 -4.0 two-component system sensor histidine kinase NtrB compare
BWI76_RS26055 -1.3 -3.7 siroheme synthase compare


Specific Phenotypes

None in this experiment

For Klebsiella michiganensis M5al in mixed community experiments

For mixed community Mixed culture; Sinorhizobium meliloti 1021 3:1 starting OD to Klebsiella across organisms