Experiment set14IT039 for Sinorhizobium meliloti 1021

Compare to:

D-Trehalose dihydrate carbon source

200 most important genes:

  gene name fitness t score description  
SMc02766 -8.7 -8.4 tryptophan synthase subunit beta compare
SMc00236 -8.3 -5.7 Indole-3-glycerol phosphate synthase compare
SMc02899 -8.0 -7.8 prephenate dehydratase compare
SMc03062 -8.0 -5.5 ABC transporter for D-maltose/D-trehalose/sucrose, permease component 1 (AglF) (from data) compare
SMc03797 -7.9 -9.4 homoserine O-succinyltransferase compare
SMc02572 -7.8 -6.1 imidazole glycerol phosphate synthase subunit HisH compare
SMc01494 -7.5 -10.3 phosphoserine phosphatase compare
SMc01054 -7.4 -5.1 required for sulfate utilization, putative electron source for sulfite reductase CysI (from data) compare
SMc01726 -7.4 -5.1 acetylglutamate kinase compare
SMc00235 -7.3 -7.1 anthranilate phosphoribosyltransferase compare
SMc00640 -7.3 -7.1 phosphoserine aminotransferase compare
SMc02245 -7.2 -5.0 dihydroorotate dehydrogenase 2 compare
SMc02717 -7.0 -8.3 2-isopropylmalate synthase compare
SMc01431 -6.8 -9.4 acetolactate synthase 3 catalytic subunit compare
SMc02767 -6.7 -10.0 N-(5'-phosphoribosyl)anthranilate isomerase compare
SMc04028 -6.7 -16.8 glutamate synthase compare
SMc02123 -6.7 -3.8 required for sulfate utilization, putative electron transport protein for sulfite reductase (from data) compare
SMc00293 -6.7 -12.8 homoserine dehydrogenase compare
SMc01843 -6.6 -11.9 5,10-methylenetetrahydrofolate reductase compare
SMc00993 -6.6 -7.9 phosphoribosylamine--glycine ligase compare
SMc04045 -6.6 -9.0 dihydroxy-acid dehydratase compare
SMc00918 -6.5 -8.9 ATP phosphoribosyltransferase regulatory subunit compare
SMc03112 -6.5 -17.3 B12-dependent methionine synthase compare
SMc04405 -6.5 -10.8 3-isopropylmalate dehydrogenase compare
SMc03895 -6.4 -16.7 pyruvate carboxylase compare
SMc02725 -6.4 -13.0 anthranilate synthase compare
SMa1635 -6.4 -2.5 hypothetical protein compare
SMc03777 -6.3 -7.5 gamma-glutamyl phosphate reductase compare
SMc00917 -6.3 -5.3 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) compare
SMc00614 -6.3 -7.0 phosphoribosylglycinamide formyltransferase compare
SMc04026 -6.3 -8.5 glutamate synthase compare
SMc03823 -6.2 -10.7 isopropylmalate isomerase large subunit compare
SMc00494 -6.2 -2.4 phosphoribosylformylglycinamidine synthase subunit PurS compare
SMc02569 -6.1 -5.7 imidazole glycerol phosphate synthase subunit HisF compare
SMc02765 -6.1 -11.8 tryptophan synthase subunit alpha compare
SMc00711 -6.0 -5.0 cyclohexadienyl dehydrogenase compare
SMc02137 -6.0 -4.1 ornithine carbamoyltransferase compare
SM_b21174 -5.9 -5.7 phosphate uptake ABC transporter permease compare
SMc01004 -5.8 -11.0 phosphoribosyl-AMP cyclohydrolase compare
SMc00554 -5.8 -6.9 amidophosphoribosyltransferase compare
SMc00488 -5.8 -15.5 phosphoribosylformylglycinamidine synthase II compare
SM_b21175 -5.8 -4.6 phosphate uptake ABC transporter permease compare
SMc00495 -5.7 -5.0 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
SMc01801 -5.7 -3.9 N-acetylglutamylphosphate reductase (EC 1.2.1.38) (from data) compare
SMc00493 -5.7 -6.7 phosphoribosylformylglycinamidine synthase I compare
SMc00815 -5.6 -3.8 inosine 5'-monophosphate dehydrogenase compare
SMc03763 -5.5 -3.8 cytosine-specific methyltransferase compare
SMc00412 -5.4 -3.7 orotidine 5'-phosphate decarboxylase compare
SMc00131 -5.3 -14.1 transcriptional regulator compare
SMc03776 -5.3 -3.7 gamma-glutamyl kinase compare
SMc02570 -5.2 -6.2 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
SMc02165 -5.2 -7.1 orotate phosphoribosyltransferase compare
SMc02755 -5.1 -7.0 S-adenosyl-L-homocysteine hydrolase compare
SMc04088 -5.1 -9.3 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
SMc00615 -5.1 -6.0 phosphoribosylaminoimidazole synthetase compare
SMc02217 -4.9 -8.2 O-succinylhomoserine sulfhydrylase compare
SMc04001 -4.9 -1.9 phosphoribosylaminoimidazole carboxylase catalytic subunit protein compare
SMc02425 -4.9 -5.8 transcriptional regulator compare
SMc03063 -4.9 -16.4 ABC transporter for D-maltose/D-trehalose/sucrose, permease component 2 (AglG) (from data) compare
SMc00092 -4.9 -15.2 phosphoadenosine phosphosulfate reductase compare
SMc02124 -4.9 -11.6 nitrite reductase compare
SMc03070 -4.9 -9.7 glucose-6-phosphate 1-dehydrogenase compare
SMc03229 -4.9 -3.3 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase compare
SM_b21176 -4.9 -4.7 phosphate uptake ABC transporter substrate-binding protein precursor compare
SMc03061 -4.8 -17.4 ABC transporter for D-maltose/D-trehalose/sucrose, substrate-binding component (AglE) (from data) compare
SMc03065 -4.8 -13.9 ABC transporter for D-maltose/D-trehalose/sucrose, ATPase component (AglK) (from data) compare
SMc04002 -4.8 -5.3 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
SMc00876 -4.7 -7.2 ATP-binding MRP protein compare
SMc00090 -4.6 -10.8 sulfate adenylyltransferase compare
SMc01360 -4.4 -5.2 aspartate carbamoyltransferase catalytic subunit compare
SMc03979 -4.3 -4.2 glyceraldehyde-3-phosphate dehydrogenase compare
SMc02574 -4.3 -4.6 imidazoleglycerol-phosphate dehydratase compare
SMc03795 -4.2 -2.3 isopropylmalate isomerase small subunit compare
SMc01880 -4.2 -2.9 pantoate--beta-alanine ligase compare
SMc01361 -4.2 -5.5 dihydroorotase compare
SMc03826 -4.2 -2.9 argininosuccinate synthase compare
SM_b20330 -4.1 -9.0 glucoside 3-dehydrogenase; active on raffinose or trehalose (thuB) (EC 1.1.99.13) (from data) compare
SMc02835 -4.1 -7.8 glucokinase compare
SMc02307 -4.1 -9.5 histidinol dehydrogenase compare
SMc00091 -4.0 -11.3 sulfate adenylyltransferase compare
SMc02166 -4.0 -10.0 dihydroorotase compare
SMc02246 -4.0 -1.5 hypothetical protein compare
SMc02138 -3.8 -6.9 acetylornithine transaminase compare
SMc01881 -3.8 -5.1 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
SMc01053 -3.8 -4.7 siroheme synthase compare
SMc01770 -3.8 -1.6 serine hydroxymethyltransferase compare
SM_b20329 -3.7 -12.9 required for glucoside 3-dehydrogenase activity on raffinose or trehalose (thuA) (EC 1.1.99.13) (from data) compare
SMc00641 -3.7 -5.5 D-3-phosphoglycerate dehydrogenase compare
SMc03978 -3.7 -2.5 transketolase compare
SMc00017 -3.7 -1.9 homoserine kinase compare
SMc02707 -3.5 -5.7 hypothetical protein compare
SMc03068 -3.5 -11.0 phosphogluconate dehydratase compare
SMc03924 -3.3 -8.8 glycogen synthase compare
SMc00294 -3.2 -12.6 aminotransferase compare
SMc01215 -3.2 -2.2 carbamoyl phosphate synthase large subunit compare
SMc04346 -3.2 -4.1 ketol-acid reductoisomerase compare
SM_b21177 -3.1 -5.5 phosphate uptake ABC transporter ATP-binding protein compare
SMc03981 -3.0 -5.2 phosphoglycerate kinase compare
SMc02833 -3.0 -3.2 penicillin-insensitive murein endopeptidase compare
SM_b20327 -3.0 -9.4 ABC transporter for D-trehalose/D-maltose/sucrose, permease component 2 (ThuG) (from data) compare
SMc00982 -3.0 -7.6 dioxygenase compare
SMc01430 -3.0 -5.7 acetolactate synthase 3 regulatory subunit compare
SMc01569 -2.8 -1.5 carbamoyl phosphate synthase small subunit compare
SM_b20326 -2.7 -7.6 ABC transporter for D-trehalose/D-maltose/sucrose, permease component 1 (ThuF) (from data) conserved
SMc01124 -2.7 -6.4 PII uridylyl-transferase compare
SM_b20328 -2.6 -10.8 ABC transporter for D-trehalose/D-maltose/sucrose, ATPase component (ThuK) (from data) compare
SMc01440 -2.6 -7.1 hydrolase serine protease transmembrane protein compare
SMc03069 -2.4 -4.1 6-phosphogluconolactonase compare
SMc02983 -2.4 -7.3 ornithine, DAP, or arginine decarboxylase compare
SM_b20325 -2.4 -11.1 ABC transporter for D-trehalose/D-maltose/sucrose, substrate-binding component (ThuE) (from data) compare
SMc00619 -2.2 -2.5 hypothetical protein compare
SMc04005 -2.2 -8.3 pyruvate kinase compare
SMc01578 -2.1 -8.2 aspartate aminotransferase compare
SMc00726 -2.1 -1.1 thiol:disulfide interchange redox-active center transmembrane protein compare
SMc01441 -2.1 -5.1 membrane bound protease compare
SMc02172 -2.0 -10.6 transcriptional regulator compare
SMa0789 -2.0 -3.4 GntR family transcriptional regulator compare
SMc01206 -1.9 -2.5 queuine tRNA-ribosyltransferase compare
SMc00302 -1.9 -3.7 hypothetical protein compare
SMc02753 -1.7 -2.2 PTS system transporter subunit IIA compare
SMc01028 -1.7 -9.5 phosphopyruvate hydratase compare
SMc01852 -1.7 -8.7 pyrophosphate--fructose-6-phosphate 1-phosphotransferase compare
SMc02260 -1.6 -2.3 ABC transporter ATP-binding protein compare
SMc02640 -1.6 -4.0 UDP-glucuronic acid epimerase compare
SMc02052 -1.6 -1.0 hypothetical protein compare
SMc02850 -1.6 -3.6 DNA polymerase I compare
SMa0846 -1.6 -1.7 transposase, fragment compare
SMc00405 -1.5 -7.6 hypothetical protein compare
SMc02058 -1.5 -3.3 YAJC protein compare
SMc02084 -1.5 -1.1 biopolymer transport transmembrane protein compare
SMc02147 -1.5 -6.2 phosphate regulon sensor histidine kinase transmembrane protein compare
SMc00450 -1.5 -2.8 protoheme IX farnesyltransferase compare
SMc02140 -1.5 -1.8 phosphate regulon transcriptional regulatory protein compare
SMc00451 -1.4 -5.5 processing protease compare
SMc03153 -1.4 -4.0 keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase compare
SMc02838 -1.4 -5.6 phosphoglyceromutase compare
SMc02338 -1.4 -2.1 periplasmic binding ABC transporter protein compare
SMc01850 -1.4 -2.7 hypothetical protein compare
SMa1779 -1.3 -1.9 hypothetical protein compare
SMc00334 -1.3 -1.6 cytidylate kinase compare
SMc04348 -1.3 -1.2 transcriptional regulator compare
SMc02144 -1.3 -3.7 phosphate ABC transporter permease compare
SMa1413 -1.2 -2.9 hypothetical protein compare
SMc02724 -1.2 -2.5 hypothetical protein compare
SMc00073 -1.2 -1.5 hypothetical protein compare
SMc01364 -1.2 -1.2 DNA topoisomerase I compare
SMc02102 -1.2 -2.7 hypothetical protein compare
SMc01368 -1.1 -5.0 transport transmembrane protein compare
SMc01568 -1.1 -1.4 hypothetical protein compare
SMc02495 -1.1 -1.5 translaldolase compare
SMc01342 -1.1 -3.0 hypothetical protein compare
SMc00492 -1.1 -0.8 hypothetical protein compare
SMc01043 -1.1 -4.7 nitrogen assimilation regulatory protein compare
SMc02363 -1.1 -2.0 cytochrome C-type biogenesis transmembrane protein compare
SMc03974 -1.1 -4.3 hypothetical protein compare
SMc02145 -1.1 -1.2 signal peptide protein compare
SMc03258 -1.1 -6.3 transcriptional regulator compare
SM_b21580 -1.0 -1.6 hypothetical protein compare
SMc01768 -1.0 -3.2 transcriptional regulator compare
SMc01495 -1.0 -3.5 transcriptional regulator compare
SMc02695 -1.0 -3.9 GTP-dependent nucleic acid-binding protein EngD compare
SMc04090 -1.0 -1.9 sun protein compare
SMc01097 -1.0 -2.9 hypothetical protein compare
SM_b20209 -1.0 -1.8 hypothetical protein compare
SMc02985 -1.0 -4.4 hypothetical protein compare
SMc02434 -0.9 -1.6 hypothetical protein compare
SMc01454 -0.9 -5.5 hypothetical protein compare
SM_b20148 -0.9 -3.1 transcriptional regulator compare
SMc02373 -0.9 -1.3 hypothetical protein compare
SMc01147 -0.9 -2.6 coproporphyrinogen III oxidase compare
SMc00579 -0.9 -4.3 dimethyladenosine transferase compare
SMc00963 -0.9 -3.1 hypothetical protein compare
SM_b20414 -0.9 -1.5 hypothetical protein compare
SMc02385 -0.9 -1.5 hypothetical protein compare
SMc03980 -0.9 -3.6 hypothetical protein compare
SMc03312 -0.9 -2.0 transposase ISRM11/ISRM2011-2 compare
SMc02543 -0.9 -3.9 hypothetical protein compare
SMc01651 -0.9 -2.3 transcriptional regulator compare
SMc02641 -0.9 -2.9 UDP-glucose 6-dehydrogenase compare
SMc02050 -0.9 -2.1 trigger factor compare
SMc02714 -0.9 -1.2 hypothetical protein compare
SM_b21173 -0.9 -1.1 hypothetical protein compare
SM_b20882 -0.9 -1.4 hypothetical protein compare
SMc01438 -0.9 -2.9 protease precursor signal peptide protein compare
SMc03064 -0.9 -5.3 alpha-glucosidase compare
SMa0797 -0.9 -2.5 hypothetical protein compare
SMc04297 -0.9 -2.6 transcriptional regulator compare
SMc00981 -0.9 -2.9 ferredoxin protein compare
SMc02143 -0.9 -3.4 phosphate ABC transporter permease compare
SMc02141 -0.9 -3.2 phosphate transporter PhoU compare
SMc01842 -0.9 -0.7 methyltransferase transcription regulator protein compare
SM_b21181 -0.9 -5.4 glutaryl-CoA dehydrogenase compare
SMc01757 -0.9 -2.1 hypothetical protein compare
SMc02435 -0.9 -1.5 methyltransferase compare
SMc02812 -0.9 -2.0 hypothetical protein compare
SMc04000 -0.9 -0.7 hypothetical protein compare
SMc02164 -0.8 -1.0 fructokinase compare
SMc00414 -0.8 -6.0 hypothetical protein compare
SMc03774 -0.8 -2.2 hypothetical protein compare
SMc00854 -0.8 -1.8 hypothetical protein compare


Specific Phenotypes

For 5 genes in this experiment

For carbon source D-Trehalose dihydrate in Sinorhizobium meliloti 1021

For carbon source D-Trehalose dihydrate across organisms