Experiment set14IT039 for Klebsiella michiganensis M5al

Compare to:

RCH2_defined_noCarbon with Mixed culture; Burkholderia bryophila 376MFSha3.1 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x

200 most important genes:

  gene name fitness t score description  
BWI76_RS12090 -4.8 -2.5 HNH endonuclease compare
BWI76_RS22755 -4.7 -3.2 phosphoadenosine phosphosulfate reductase compare
BWI76_RS08520 -4.3 -2.4 colicin transporter TolQ compare
BWI76_RS26460 -4.3 -4.1 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
BWI76_RS23265 -4.3 -1.9 hypothetical protein compare
BWI76_RS05015 -3.8 -2.4 transcriptional regulator compare
BWI76_RS17975 -3.8 -4.2 tail-specific protease compare
BWI76_RS11300 -3.8 -1.2 cupin compare
BWI76_RS26455 -3.7 -2.2 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase compare
BWI76_RS25335 -3.7 -2.0 stringent starvation protein A compare
BWI76_RS08385 -3.4 -4.0 citrate (Si)-synthase compare
BWI76_RS17980 -3.4 -5.5 RNA chaperone ProQ compare
BWI76_RS23920 -3.4 -2.3 D-3-phosphoglycerate dehydrogenase compare
BWI76_RS09760 -3.3 -3.2 3-phosphoshikimate 1-carboxyvinyltransferase compare
BWI76_RS08525 -3.2 -1.6 colicin transporter compare
BWI76_RS09755 -3.2 -2.2 phosphoserine transaminase compare
BWI76_RS05840 -3.2 -3.7 glutamate 5-kinase compare
BWI76_RS09335 -3.1 -1.4 baseplate assembly protein W compare
BWI76_RS10990 -3.1 -3.2 dihydroorotase compare
BWI76_RS06535 -3.0 -2.1 endopeptidase La compare
BWI76_RS01800 -3.0 -2.0 glucose-6-phosphate isomerase compare
BWI76_RS22690 -2.9 -3.4 adenylyl-sulfate kinase compare
BWI76_RS15825 -2.9 -1.2 hypothetical protein compare
BWI76_RS08535 -2.9 -1.5 translocation protein TolB compare
BWI76_RS21580 -2.8 -1.5 SsrA-binding protein compare
BWI76_RS20355 -2.7 -3.4 colicin V production protein compare
BWI76_RS01615 -2.7 -10.3 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase compare
BWI76_RS07070 -2.7 -5.9 5-(carboxyamino)imidazole ribonucleotide mutase compare
BWI76_RS05835 -2.7 -2.2 gamma-glutamyl-phosphate reductase compare
BWI76_RS09645 -2.7 -0.8 thioredoxin-disulfide reductase compare
BWI76_RS18920 -2.7 -3.2 ATP phosphoribosyltransferase compare
BWI76_RS04470 -2.6 -9.6 carbamoyl phosphate synthase large subunit compare
BWI76_RS23365 -2.6 -3.7 LysR family transcriptional regulator compare
BWI76_RS11980 -2.5 -2.0 DeoR family transcriptional regulator compare
BWI76_RS11840 -2.5 -4.3 tryptophan synthase subunit alpha compare
BWI76_RS01095 -2.5 -2.4 UDP-N-acetyl-D-mannosamine dehydrogenase compare
BWI76_RS21475 -2.5 -2.7 bifunctional chorismate mutase/prephenate dehydrogenase compare
BWI76_RS19770 -2.5 -2.0 bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase compare
BWI76_RS21070 -2.5 -1.8 outer membrane protein assembly factor BamB compare
BWI76_RS09910 -2.5 -14.4 dihydroorotate dehydrogenase (quinone) compare
BWI76_RS07465 -2.5 -1.6 TetR family transcriptional regulator compare
BWI76_RS00240 -2.5 -1.5 FMN-binding protein MioC compare
BWI76_RS27390 -2.5 -6.3 ribonuclease PH compare
BWI76_RS02815 -2.4 -1.9 fructose-bisphosphatase class I compare
BWI76_RS18950 -2.4 -3.8 imidazole glycerol phosphate synthase cyclase subunit compare
BWI76_RS25920 -2.4 -1.7 peptidylprolyl isomerase compare
BWI76_RS18930 -2.4 -4.6 histidinol-phosphate transaminase compare
BWI76_RS00855 -2.3 -9.7 argininosuccinate lyase compare
BWI76_RS01610 -2.3 -8.5 phosphoribosylamine--glycine ligase compare
BWI76_RS07065 -2.3 -9.0 5-(carboxyamino)imidazole ribonucleotide synthase compare
BWI76_RS24580 -2.3 -4.0 PTS-dependent dihydroxyacetone kinase operon transcriptional regulator DhaR compare
BWI76_RS20965 -2.3 -4.4 phosphoribosylformylglycinamidine cyclo-ligase compare
BWI76_RS11965 -2.3 -4.4 orotidine-5'-phosphate decarboxylase compare
BWI76_RS26390 -2.3 -6.3 cell division protein FtsX compare
BWI76_RS21265 -2.2 -11.3 phosphoribosylformylglycinamidine synthase compare
BWI76_RS23360 -2.2 -1.3 diaminopimelate decarboxylase compare
BWI76_RS04465 -2.2 -5.6 carbamoyl-phosphate synthase small subunit compare
BWI76_RS20350 -2.2 -9.6 amidophosphoribosyltransferase compare
BWI76_RS16965 -2.2 -1.7 murein lipoprotein compare
BWI76_RS05075 -2.2 -1.0 type II secretion system protein GspG compare
BWI76_RS08395 -2.2 -1.9 succinate dehydrogenase cytochrome b556 large subunit compare
BWI76_RS00835 -2.2 -11.4 phosphoenolpyruvate carboxylase compare
BWI76_RS08210 -2.1 -1.3 N-acetylglucosamine-6-phosphate deacetylase compare
BWI76_RS27385 -2.1 -5.7 orotate phosphoribosyltransferase compare
BWI76_RS26440 -2.1 -1.3 hypothetical protein compare
BWI76_RS08040 -2.1 -2.2 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH compare
BWI76_RS25645 -2.1 -6.0 shikimate dehydrogenase compare
BWI76_RS19840 -2.1 -0.6 hypothetical protein compare
BWI76_RS16955 -2.1 -1.1 hypothetical protein compare
BWI76_RS01385 -2.1 -2.7 potassium transporter compare
BWI76_RS11850 -2.0 -6.4 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase compare
BWI76_RS00875 -2.0 -4.9 DNA-binding transcriptional regulator FabR compare
BWI76_RS26395 -2.0 -5.1 cell division protein FtsE compare
BWI76_RS18935 -2.0 -9.2 bifunctional imidazole glycerol-phosphate dehydratase/histidinol phosphatase compare
BWI76_RS18940 -2.0 -6.2 imidazole glycerol phosphate synthase subunit HisH compare
BWI76_RS04705 -2.0 -4.2 DNA-binding transcriptional regulator FruR compare
BWI76_RS18925 -2.0 -4.7 histidinol dehydrogenase compare
BWI76_RS21310 -2.0 -1.4 DNA repair protein RecO compare
BWI76_RS02995 -2.0 -5.4 aspartate carbamoyltransferase compare
BWI76_RS24740 -1.9 -3.3 GntR family transcriptional regulator compare
BWI76_RS25870 -1.9 -1.4 elongation factor Tu compare
BWI76_RS14300 -1.9 -2.3 hypothetical protein compare
BWI76_RS16425 -1.9 -1.9 hypothetical protein compare
BWI76_RS03660 -1.8 -2.9 hypothetical protein compare
BWI76_RS04645 -1.8 -3.0 3-dehydroquinase compare
BWI76_RS21465 -1.8 -6.2 bifunctional chorismate mutase/prephenate dehydratase compare
BWI76_RS24595 -1.8 -2.8 dihydroxyacetone kinase subunit DhaK compare
BWI76_RS24900 -1.8 -1.1 DeoR family transcriptional regulator compare
BWI76_RS15195 -1.8 -1.8 DUF4186 domain-containing protein compare
BWI76_RS26470 -1.8 -4.3 4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase compare
BWI76_RS24605 -1.8 -5.2 dihydroxyacetone kinase subunit DhaM compare
BWI76_RS15110 -1.8 -3.5 putative excinuclease ABC subunit A compare
BWI76_RS18955 -1.7 -4.3 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase compare
BWI76_RS20895 -1.7 -3.8 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
BWI76_RS15115 -1.7 -1.2 MFS transporter compare
BWI76_RS27440 -1.7 -1.2 DNA helicase RecG compare
BWI76_RS25960 -1.7 -3.2 NUDIX hydrolase compare
BWI76_RS15535 -1.7 -3.4 hypothetical protein compare
BWI76_RS23220 -1.7 -7.8 amino-acid N-acetyltransferase compare
BWI76_RS05915 -1.7 -3.0 helix-turn-helix transcriptional regulator compare
BWI76_RS08530 -1.7 -1.1 protein TolA compare
BWI76_RS00845 -1.7 -8.2 N-acetyl-gamma-glutamyl-phosphate reductase compare
BWI76_RS06475 -1.7 -1.4 protoheme IX farnesyltransferase compare
BWI76_RS26095 -1.7 -0.7 shikimate kinase compare
BWI76_RS25115 -1.7 -8.1 argininosuccinate synthase compare
BWI76_RS01190 -1.7 -1.6 iron donor protein CyaY compare
BWI76_RS03010 -1.7 -6.3 ornithine carbamoyltransferase compare
BWI76_RS25065 -1.7 -3.9 polyribonucleotide nucleotidyltransferase compare
BWI76_RS23490 -1.7 -4.0 fimbrial protein compare
BWI76_RS25060 -1.6 -3.9 lipoprotein NlpI compare
BWI76_RS05120 -1.6 -6.3 bifunctional glycosyl transferase/transpeptidase compare
BWI76_RS22765 -1.6 -7.0 sulfite reductase subunit alpha compare
BWI76_RS20640 -1.6 -3.2 cysteine synthase A compare
BWI76_RS01115 -1.6 -1.6 dTDP-4-amino-4,6-dideoxygalactose transaminase compare
BWI76_RS21450 -1.6 -1.4 23S rRNA pseudouridine(1911/1915/1917) synthase compare
BWI76_RS22760 -1.6 -4.9 sulfite reductase subunit beta compare
BWI76_RS26665 -1.6 -3.1 DNA-binding response regulator compare
BWI76_RS10930 -1.6 -7.0 glucan biosynthesis protein G compare
BWI76_RS01220 -1.5 -3.4 DNA-dependent helicase II compare
BWI76_RS08750 -1.5 -1.5 kinase inhibitor compare
BWI76_RS04250 -1.5 -5.5 homoserine kinase compare
BWI76_RS00850 -1.5 -6.7 acetylglutamate kinase compare
BWI76_RS20360 -1.5 -0.8 cell division protein DedD compare
BWI76_RS13160 -1.5 -1.6 azoreductase compare
BWI76_RS22805 -1.5 -5.3 GTP diphosphokinase compare
BWI76_RS00345 -1.5 -3.5 protein disulfide oxidoreductase DsbA compare
BWI76_RS17720 -1.5 -0.4 muramoyltetrapeptide carboxypeptidase compare
BWI76_RS12215 -1.5 -4.0 HNH endonuclease compare
BWI76_RS05450 -1.5 -0.6 ribonuclease HI compare
BWI76_RS15530 -1.5 -2.9 hypothetical protein compare
BWI76_RS14305 -1.5 -3.9 metallophosphoesterase compare
BWI76_RS05260 -1.4 -1.2 chaperone compare
BWI76_RS11860 -1.4 -6.2 anthranilate synthase component I compare
BWI76_RS11855 -1.4 -3.8 bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase compare
BWI76_RS14770 -1.4 -1.0 PTS IIA 2 domain protein compare
BWI76_RS25300 -1.4 -2.7 hybrid sensor histidine kinase/response regulator compare
BWI76_RS01185 -1.4 -1.0 adenylate cyclase compare
BWI76_RS04525 -1.4 -1.3 4-hydroxythreonine-4-phosphate dehydrogenase PdxA compare
BWI76_RS11155 -1.4 -2.5 penicillin-binding protein activator LpoB compare
BWI76_RS02775 -1.4 -3.4 outer membrane protein assembly factor compare
BWI76_RS11110 -1.4 -1.4 cell division protein YceG compare
BWI76_RS12870 -1.4 -1.8 putative phytanoyl-CoA dioxygenase compare
BWI76_RS22935 -1.4 -1.4 L-fucose mutarotase compare
BWI76_RS09640 -1.4 -1.9 cysteine/glutathione ABC transporter permease/ATP-binding protein CydD compare
BWI76_RS19905 -1.4 -3.5 OmpK36 porin compare
BWI76_RS04240 -1.4 -2.1 thr operon leader peptide compare
BWI76_RS10935 -1.4 -3.5 glucan biosynthesis glucosyltransferase H compare
BWI76_RS24400 -1.3 -2.7 outer membrane channel protein TolC compare
BWI76_RS00400 -1.3 -0.7 glutamine synthetase compare
BWI76_RS03295 -1.3 -1.1 transposase compare
BWI76_RS23495 -1.3 -6.1 hypothetical protein compare
BWI76_RS19685 -1.3 -2.8 lysine transporter compare
BWI76_RS04270 -1.3 -3.9 transaldolase compare
BWI76_RS16275 -1.3 -2.5 fumarate hydratase FumA compare
BWI76_RS25425 -1.3 -0.9 arginine repressor compare
BWI76_RS14320 -1.3 -1.4 hypothetical protein compare
BWI76_RS01200 -1.3 -0.8 diaminopimelate epimerase compare
BWI76_RS18470 -1.3 -1.6 hypothetical protein compare
BWI76_RS16950 -1.2 -1.4 TetR family transcriptional regulator compare
BWI76_RS12205 -1.2 -3.7 hypothetical protein compare
BWI76_RS04245 -1.2 -7.4 bifunctional aspartate kinase/homoserine dehydrogenase I compare
BWI76_RS04255 -1.2 -7.5 threonine synthase compare
BWI76_RS21290 -1.2 -2.6 DNA-binding transcriptional regulator compare
BWI76_RS10305 -1.2 -3.9 transposase compare
BWI76_RS01080 -1.2 -4.1 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase compare
BWI76_RS19515 -1.2 -2.5 D-lactate dehydrogenase (cytochrome c-553) (EC 1.1.2.5) (from data) compare
BWI76_RS10465 -1.2 -3.0 hypothetical protein compare
BWI76_RS15605 -1.2 -1.9 hypothetical protein compare
BWI76_RS15350 -1.2 -0.9 hypothetical protein compare
BWI76_RS17300 -1.2 -1.0 tRNA-Tyr compare
BWI76_RS15680 -1.2 -2.7 hypothetical protein compare
BWI76_RS00600 -1.2 -3.5 LacI family transcriptional regulator compare
BWI76_RS12895 -1.2 -2.4 hypothetical protein compare
BWI76_RS12125 -1.2 -2.3 hypothetical protein compare
BWI76_RS21370 -1.2 -1.0 ATP-dependent RNA helicase SrmB compare
BWI76_RS20130 -1.2 -4.0 NADH-quinone oxidoreductase subunit N compare
BWI76_RS12270 -1.2 -2.9 hypothetical protein compare
BWI76_RS16360 -1.1 -0.9 electron transport complex subunit RsxB compare
BWI76_RS21350 -1.1 -1.9 anti-RNA polymerase sigma factor SigE compare
BWI76_RS10745 -1.1 -0.7 hypothetical protein compare
BWI76_RS14065 -1.1 -1.1 hypothetical protein compare
BWI76_RS00975 -1.1 -6.8 dihydroxy-acid dehydratase compare
BWI76_RS12345 -1.1 -2.4 nitrite transporter compare
BWI76_RS21250 -1.1 -2.9 two-component system response regulator GlrR compare
BWI76_RS07785 -1.1 -1.1 transcriptional regulator compare
BWI76_RS20170 -1.1 -2.1 NADH-quinone oxidoreductase subunit F compare
BWI76_RS09670 -1.1 -2.3 recombination factor protein RarA compare
BWI76_RS12335 -1.1 -4.5 hypothetical protein compare
BWI76_RS25600 -1.1 -0.7 tRNA-Thr compare
BWI76_RS13755 -1.1 -1.3 hypothetical protein compare
BWI76_RS15685 -1.1 -2.1 hypothetical protein compare
BWI76_RS02340 -1.1 -4.4 membrane protein FxsA compare
BWI76_RS04940 -1.1 -4.0 hypothetical protein compare
BWI76_RS20750 -1.1 -0.5 carboxysome structural protein EutK compare
BWI76_RS08430 -1.1 -3.7 succinate--CoA ligase subunit alpha compare
BWI76_RS01870 -1.1 -2.9 diacylglycerol kinase compare
BWI76_RS12195 -1.1 -2.2 hypothetical protein compare
BWI76_RS12535 -1.1 -3.4 hypothetical protein compare
BWI76_RS08405 -1.1 -1.7 succinate dehydrogenase flavoprotein subunit compare
BWI76_RS09870 -1.1 -3.1 aromatic amino acid aminotransferase compare


Specific Phenotypes

None in this experiment

For Klebsiella michiganensis M5al in mixed community experiments

For mixed community Mixed culture; Burkholderia bryophila 376MFSha3.1 3:1 starting OD to Klebsiella across organisms