Experiment set14IT039 for Klebsiella michiganensis M5al

Compare to:

RCH2_defined_noCarbon with Mixed culture; Burkholderia bryophila 376MFSha3.1 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x

200 most detrimental genes:

  gene name fitness t score description  
BWI76_RS08765 +1.5 3.3 8-amino-7-oxononanoate synthase compare
BWI76_RS07730 +1.5 1.1 iron-enterobactin transporter membrane protein compare
BWI76_RS14805 +1.5 2.6 hypothetical protein compare
BWI76_RS15260 +1.4 2.0 hypothetical protein compare
BWI76_RS00025 +1.3 1.7 hypothetical protein compare
BWI76_RS14775 +1.3 3.3 creatinine amidohydrolase compare
BWI76_RS11435 +1.3 2.8 hypothetical protein compare
BWI76_RS15975 +1.3 1.2 hypothetical protein compare
BWI76_RS07985 +1.2 1.4 fluoride ion transporter CrcB compare
BWI76_RS08330 +1.1 1.7 hypothetical protein compare
BWI76_RS20050 +1.1 2.5 hypothetical protein compare
BWI76_RS03595 +1.1 1.5 ethanolamine utilization protein EutM compare
BWI76_RS07475 +1.1 2.0 DNA-binding transcriptional regulator RamA compare
BWI76_RS12550 +1.1 1.8 hypothetical protein compare
BWI76_RS03105 +1.1 1.2 myo-inosose-2 dehydratase compare
BWI76_RS25545 +1.1 3.3 hypothetical protein compare
BWI76_RS26405 +1.0 1.6 16S rRNA (guanine(966)-N(2))-methyltransferase compare
BWI76_RS05200 +1.0 1.4 bifunctional uridylyltransferase/uridylyl-removing protein compare
BWI76_RS24810 +1.0 4.0 hypothetical protein compare
BWI76_RS01325 +1.0 2.1 twin-arginine translocase subunit TatB compare
BWI76_RS19310 +1.0 2.7 ABC transporter permease compare
BWI76_RS19480 +1.0 4.1 transcriptional regulator compare
BWI76_RS09520 +0.9 1.6 arginine ABC transporter ATP-binding protein ArtP compare
BWI76_RS21170 +0.9 1.6 tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ compare
BWI76_RS15940 +0.9 1.6 DMSO reductase maturation protein DsmD compare
BWI76_RS16015 +0.9 2.9 pheromone autoinducer 2 transporter compare
BWI76_RS24035 +0.9 3.7 hypothetical protein compare
BWI76_RS25000 +0.9 1.4 malonate decarboxylase acyl carrier protein compare
BWI76_RS15790 +0.9 3.1 replication protein compare
BWI76_RS05895 +0.9 3.1 phosphonate ABC transporter, permease protein PhnE compare
BWI76_RS20375 +0.9 1.7 membrane protein compare
BWI76_RS20800 +0.9 1.5 carboxysome shell protein compare
BWI76_RS16795 +0.9 2.0 amino acid ABC transporter ATPase compare
BWI76_RS07780 +0.9 1.1 hypothetical protein compare
BWI76_RS20900 +0.9 1.1 outer membrane protein assembly factor BamC compare
BWI76_RS05315 +0.9 1.8 Rho-binding antiterminator compare
BWI76_RS02180 +0.8 1.2 hypothetical protein compare
BWI76_RS15980 +0.8 2.2 lysine transporter LysE compare
BWI76_RS12780 +0.8 2.1 hypothetical protein compare
BWI76_RS09440 +0.8 1.6 hypothetical protein compare
BWI76_RS24885 +0.8 0.8 PTS galactitol transporter subunit IIB compare
BWI76_RS15035 +0.8 1.6 metal ABC transporter permease compare
BWI76_RS13685 +0.8 2.1 IclR family transcriptional regulator compare
BWI76_RS13445 +0.8 1.3 alpha/beta hydrolase compare
BWI76_RS16035 +0.8 2.7 biotin-independent malonate decarboxylase subunit beta compare
BWI76_RS23690 +0.8 1.5 putative glyoxalase/bleomycin resistance protein/dioxygenase compare
BWI76_RS18300 +0.8 2.3 hypothetical protein compare
BWI76_RS18360 +0.8 1.6 aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase family protein compare
BWI76_RS08980 +0.8 1.2 DNA starvation/stationary phase protection protein compare
BWI76_RS14435 +0.8 1.0 glutamine ABC transporter ATP-binding protein compare
BWI76_RS26625 +0.8 3.3 gluconate transporter periplasmic gluconate-binding protein compare
BWI76_RS15200 +0.8 2.9 glutaminase compare
BWI76_RS11390 +0.8 2.6 iron dicitrate transport regulator FecR compare
BWI76_RS19490 +0.8 0.8 binding-protein-dependent transport system inner membrane protein compare
BWI76_RS14980 +0.8 0.7 hypothetical protein compare
BWI76_RS11755 +0.8 3.0 catalase HPII compare
BWI76_RS18810 +0.8 2.0 nitrogenase iron protein compare
BWI76_RS01815 +0.8 2.5 phosphate-starvation-inducible protein PsiE compare
BWI76_RS14930 +0.8 1.7 hypothetical protein compare
BWI76_RS18410 +0.7 1.6 drug/metabolite exporter YedA compare
BWI76_RS06970 +0.7 3.8 selenophosphate-dependent tRNA 2-selenouridine synthase compare
BWI76_RS14075 +0.7 0.7 TetR family transcriptional regulator compare
BWI76_RS15950 +0.7 1.2 dethiobiotin synthase compare
BWI76_RS18165 +0.7 0.9 NUDIX pyrophosphatase compare
BWI76_RS06200 +0.7 2.0 hypothetical protein compare
BWI76_RS22450 +0.7 1.8 selenoprotein W-related protein compare
BWI76_RS07350 +0.7 1.7 alcohol dehydrogenase compare
BWI76_RS04010 +0.7 2.8 hypothetical protein compare
BWI76_RS23015 +0.7 1.3 cobalt transporter ATP-binding subunit compare
BWI76_RS13175 +0.7 2.9 NodT family RND efflux system outer membrane lipoprotein compare
BWI76_RS17805 +0.7 0.7 membrane protein compare
BWI76_RS18675 +0.7 1.6 fimbrial protein compare
BWI76_RS15300 +0.7 2.7 multiple antibiotic resistance regulatory periplasmic protein MarB compare
BWI76_RS20765 +0.7 2.0 ethanolamine ammonia lyase large subunit compare
BWI76_RS06980 +0.7 2.4 ureidoglycolate lyase compare
BWI76_RS21275 +0.7 4.5 lytic transglycosylase F compare
BWI76_RS04840 +0.7 3.2 prepilin peptidase-dependent pilin compare
BWI76_RS03605 +0.7 1.6 BMC domain-containing protein compare
BWI76_RS06130 +0.7 2.4 extensin family protein compare
BWI76_RS17400 +0.7 0.9 transporter compare
BWI76_RS16455 +0.7 1.5 superoxide dismutase compare
BWI76_RS12665 +0.7 1.8 hypothetical protein compare
BWI76_RS26965 +0.7 3.1 hypothetical protein compare
BWI76_RS11790 +0.7 1.7 acyl-CoA thioesterase compare
BWI76_RS03040 +0.7 2.2 leucyl aminopeptidase compare
BWI76_RS21505 +0.7 0.9 hypothetical protein compare
BWI76_RS23065 +0.7 1.6 cobalt-precorrin-6Y C(15)-methyltransferase compare
BWI76_RS24075 +0.7 2.1 glutathione synthase compare
BWI76_RS07255 +0.7 2.2 hypothetical protein compare
BWI76_RS02045 +0.7 1.7 LysR family transcriptional regulator compare
BWI76_RS17390 +0.6 1.1 DsrE family protein compare
BWI76_RS08380 +0.6 0.6 endonuclease VIII compare
BWI76_RS15030 +0.6 1.3 ABC transporter compare
BWI76_RS18175 +0.6 3.2 hydrolase compare
BWI76_RS27875 +0.6 1.1 membrane protein compare
BWI76_RS15215 +0.6 0.5 N-acetyltransferase compare
BWI76_RS10770 +0.6 2.0 pyrimidine utilization protein C compare
BWI76_RS06410 +0.6 2.4 YajQ family cyclic di-GMP-binding protein compare
BWI76_RS17770 +0.6 1.1 isomerase/hydrolase compare
BWI76_RS15890 +0.6 2.1 Zn-dependent oxidoreductase compare
BWI76_RS21945 +0.6 1.5 LysR family transcriptional regulator compare
BWI76_RS16760 +0.6 2.2 lipase compare
BWI76_RS15285 +0.6 2.0 stress protection protein MarC compare
BWI76_RS19935 +0.6 1.0 hypothetical protein compare
BWI76_RS22200 +0.6 3.3 iron ABC transporter compare
BWI76_RS00335 +0.6 1.5 hypothetical protein compare
BWI76_RS21185 +0.6 2.2 hypothetical protein compare
BWI76_RS16515 +0.6 0.9 LysR family transcriptional regulator compare
BWI76_RS08825 +0.6 2.2 cyclic pyranopterin monophosphate synthase MoaC compare
BWI76_RS20430 +0.6 1.8 penicillin-insensitive murein endopeptidase compare
BWI76_RS13205 +0.6 2.6 hypothetical protein compare
BWI76_RS14825 +0.6 1.3 dienelactone hydrolase family protein compare
BWI76_RS19535 +0.6 1.8 putative integral membrane protein compare
BWI76_RS04305 +0.6 0.7 molecular chaperone DnaJ compare
BWI76_RS23340 +0.6 1.5 transcriptional regulator compare
BWI76_RS01015 +0.6 1.8 nicotinamide riboside transporter PnuC compare
BWI76_RS15845 +0.6 0.7 hypothetical protein compare
BWI76_RS23255 +0.6 1.5 prepilin-type cleavage/methylation domain-containing protein compare
BWI76_RS12730 +0.6 3.4 pyruvate:ferredoxin (flavodoxin) oxidoreductase compare
BWI76_RS09450 +0.6 1.4 30S ribosomal protein S6--L-glutamate ligase compare
BWI76_RS24500 +0.6 0.9 urease subunit gamma compare
BWI76_RS15915 +0.6 3.1 YnfC family lipoprotein compare
BWI76_RS19965 +0.6 2.7 sn-glycerol-3-phosphate dehydrogenase subunit A compare
BWI76_RS20145 +0.6 0.9 NADH-quinone oxidoreductase subunit K compare
BWI76_RS01205 +0.6 1.1 DUF484 family protein compare
BWI76_RS18755 +0.6 0.7 adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase compare
BWI76_RS23030 +0.6 1.4 cobalamin biosynthesis protein CbiM compare
BWI76_RS00565 +0.6 2.3 branched-chain amino acid transport compare
BWI76_RS12585 +0.6 3.0 transcriptional regulator compare
BWI76_RS11430 +0.6 0.5 lipoprotein compare
BWI76_RS23055 +0.6 1.5 cobalamin biosynthesis protein CbiG compare
BWI76_RS20925 +0.6 2.3 peptidase M48 compare
BWI76_RS23190 +0.6 2.1 propanediol utilization protein PduU compare
BWI76_RS08370 +0.6 2.1 membrane protein compare
BWI76_RS16025 +0.6 1.3 triphosphoribosyl-dephospho-CoA synthase compare
BWI76_RS09565 +0.6 3.3 hybrid-cluster NAD(P)-dependent oxidoreductase compare
BWI76_RS19750 +0.6 1.5 elongation factor P-like protein YeiP compare
BWI76_RS03310 +0.6 2.7 AraC family transcriptional regulator compare
BWI76_RS08940 +0.6 2.2 PKHD-type hydroxylase compare
BWI76_RS11805 +0.6 2.3 hypothetical protein compare
BWI76_RS15220 +0.6 2.7 L-lactate dehydrogenase compare
BWI76_RS08770 +0.6 1.8 malonyl-ACP O-methyltransferase BioC compare
BWI76_RS06285 +0.6 2.0 peroxiredoxin compare
BWI76_RS17380 +0.6 2.3 nitrate transporter component compare
BWI76_RS17675 +0.6 1.0 hypothetical protein compare
BWI76_RS26480 +0.6 3.0 undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase compare
BWI76_RS04985 +0.6 2.0 aspartate 1-decarboxylase compare
BWI76_RS03045 +0.6 0.9 hypothetical protein compare
BWI76_RS13405 +0.6 2.9 spermidine/putrescine ABC transporter substrate-binding protein compare
BWI76_RS06505 +0.6 2.7 hypothetical protein compare
BWI76_RS24260 +0.6 1.4 hypothetical protein compare
BWI76_RS04600 +0.6 2.2 inner membrane protein compare
BWI76_RS09400 +0.6 1.4 phage transcriptional activator, Ogr/delta compare
BWI76_RS10320 +0.6 2.4 alpha-glucosidase/alpha-galactosidase compare
BWI76_RS16695 +0.6 3.1 dipeptide/oligopeptide/nickel ABC transporter ATP-binding protein compare
BWI76_RS01910 +0.6 3.8 quinone oxidoreductase compare
BWI76_RS10490 +0.6 2.6 vanillate O-demethylase oxygenase subunit compare
BWI76_RS18225 +0.6 1.5 universal stress protein C compare
BWI76_RS02690 +0.5 1.1 hypothetical protein compare
BWI76_RS23895 +0.5 0.6 Xaa-Pro aminopeptidase compare
BWI76_RS19530 +0.5 1.9 YIP1 family protein compare
BWI76_RS10485 +0.5 1.4 (hypo)xanthine hydroxylase reductase compare
BWI76_RS23955 +0.5 2.8 LysR family transcriptional regulator compare
BWI76_RS08640 +0.5 1.2 multidrug efflux pump-associated protein, AcrZ family compare
BWI76_RS18005 +0.5 2.6 hypothetical protein compare
BWI76_RS04875 +0.5 2.8 transcriptional regulator PdhR compare
BWI76_RS25245 +0.5 1.3 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase compare
BWI76_RS25630 +0.5 1.9 hypothetical protein compare
BWI76_RS01335 +0.5 1.2 DNase TatD compare
BWI76_RS23050 +0.5 0.9 cobalt-precorrin-3B C(17)-methyltransferase compare
BWI76_RS15900 +0.5 2.3 hypothetical protein compare
BWI76_RS06280 +0.5 2.7 hypothetical protein compare
BWI76_RS16210 +0.5 0.9 hypothetical protein compare
BWI76_RS02625 +0.5 1.7 PTS ascorbate transporter subunit IIB compare
BWI76_RS07865 +0.5 1.1 methylthioribulose 1-phosphate dehydratase compare
BWI76_RS13220 +0.5 1.6 N-acetyltransferase compare
BWI76_RS22430 +0.5 1.4 manganese/iron transporter ATP-binding protein compare
BWI76_RS16750 +0.5 3.8 acetolactate synthase compare
BWI76_RS12520 +0.5 1.6 hypothetical protein compare
BWI76_RS13200 +0.5 2.0 hypothetical protein compare
BWI76_RS16030 +0.5 2.1 malonate decarboxylase acyl carrier protein compare
BWI76_RS02720 +0.5 2.7 NAD(P)-dependent oxidoreductase compare
BWI76_RS11195 +0.5 1.8 multiple stress resistance protein BhsA compare
BWI76_RS15080 +0.5 4.4 hypothetical protein compare
BWI76_RS00430 +0.5 1.4 GNAT family N-acetyltransferase compare
BWI76_RS10680 +0.5 1.6 tartrate dehydrogenase compare
BWI76_RS15270 +0.5 1.7 phenazine biosynthesis protein PhzF family compare
BWI76_RS11125 +0.5 1.0 metal-dependent hydrolase compare
BWI76_RS06895 +0.5 3.2 biopolymer transporter ExbB compare
BWI76_RS21460 +0.5 0.6 translation inhibitor protein RaiA compare
BWI76_RS01240 +0.5 2.3 phospholipase A compare
BWI76_RS19360 +0.5 1.4 glucose dehydrogenase compare
BWI76_RS27460 +0.5 1.4 hypothetical protein compare
BWI76_RS12465 +0.5 0.8 phage shock protein D compare
BWI76_RS08340 +0.5 2.7 MFS transporter compare
BWI76_RS17765 +0.5 1.4 hypothetical protein compare
BWI76_RS15295 +0.5 2.0 MDR efflux pump AcrAB transcriptional activator MarA compare
BWI76_RS07510 +0.5 0.9 hypothetical protein compare
BWI76_RS04960 +0.5 2.6 carbonate dehydratase compare
BWI76_RS11675 +0.5 1.1 arginine N-succinyltransferase compare


Specific Phenotypes

None in this experiment

For Klebsiella michiganensis M5al in mixed community experiments

For mixed community Mixed culture; Burkholderia bryophila 376MFSha3.1 3:1 starting OD to Klebsiella across organisms