Experiment set14IT038 for Klebsiella michiganensis M5al

Compare to:

RCH2_defined_noCarbon with Mixed culture; Dyella japonica UNC79MFTsu3.2 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x

200 most important genes:

  gene name fitness t score description  
BWI76_RS26460 -4.7 -3.0 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
BWI76_RS26455 -4.6 -1.6 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase compare
BWI76_RS05260 -4.6 -1.1 chaperone compare
BWI76_RS11170 -4.6 -1.1 hypothetical protein compare
BWI76_RS08520 -4.2 -1.7 colicin transporter TolQ compare
BWI76_RS09625 -4.0 -1.0 hypothetical protein compare
BWI76_RS22690 -4.0 -2.1 adenylyl-sulfate kinase compare
BWI76_RS22755 -3.7 -3.5 phosphoadenosine phosphosulfate reductase compare
BWI76_RS21565 -3.6 -0.9 outer membrane protein assembly factor BamE compare
BWI76_RS21070 -3.6 -1.5 outer membrane protein assembly factor BamB compare
BWI76_RS25335 -3.5 -1.4 stringent starvation protein A compare
BWI76_RS13545 -3.4 -1.2 N-acetyltransferase compare
BWI76_RS05840 -3.4 -2.9 glutamate 5-kinase compare
BWI76_RS10745 -3.4 -0.8 hypothetical protein compare
BWI76_RS19375 -3.3 -1.4 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase compare
BWI76_RS09760 -3.2 -2.5 3-phosphoshikimate 1-carboxyvinyltransferase compare
BWI76_RS16965 -3.2 -2.0 murein lipoprotein compare
BWI76_RS23920 -3.2 -1.6 D-3-phosphoglycerate dehydrogenase compare
BWI76_RS14320 -3.0 -1.6 hypothetical protein compare
BWI76_RS24575 -3.0 -0.9 hypothetical protein compare
BWI76_RS02815 -2.9 -1.6 fructose-bisphosphatase class I compare
BWI76_RS00875 -2.9 -4.3 DNA-binding transcriptional regulator FabR compare
BWI76_RS03660 -2.9 -2.0 hypothetical protein compare
BWI76_RS19770 -2.9 -1.3 bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase compare
BWI76_RS01350 -2.9 -0.7 NAD(P)H-flavin reductase compare
BWI76_RS01800 -2.8 -1.7 glucose-6-phosphate isomerase compare
BWI76_RS08210 -2.8 -0.9 N-acetylglucosamine-6-phosphate deacetylase compare
BWI76_RS15825 -2.8 -0.9 hypothetical protein compare
BWI76_RS08535 -2.7 -1.1 translocation protein TolB compare
BWI76_RS21580 -2.7 -1.1 SsrA-binding protein compare
BWI76_RS09645 -2.7 -0.6 thioredoxin-disulfide reductase compare
BWI76_RS04645 -2.6 -3.0 3-dehydroquinase compare
BWI76_RS01095 -2.6 -1.6 UDP-N-acetyl-D-mannosamine dehydrogenase compare
BWI76_RS04160 -2.5 -2.7 phosphoserine phosphatase compare
BWI76_RS07465 -2.5 -1.1 TetR family transcriptional regulator compare
BWI76_RS07070 -2.4 -4.4 5-(carboxyamino)imidazole ribonucleotide mutase compare
BWI76_RS01630 -2.4 -1.0 16S ribosomal RNA compare
BWI76_RS08530 -2.4 -1.3 protein TolA compare
BWI76_RS17980 -2.3 -2.8 RNA chaperone ProQ compare
BWI76_RS09970 -2.3 -0.7 porin OmpA compare
BWI76_RS04705 -2.3 -4.4 DNA-binding transcriptional regulator FruR compare
BWI76_RS06535 -2.3 -2.0 endopeptidase La compare
BWI76_RS03665 -2.2 -1.6 ABC transporter ATP-binding protein compare
BWI76_RS01870 -2.2 -3.1 diacylglycerol kinase compare
BWI76_RS22765 -2.2 -7.7 sulfite reductase subunit alpha compare
BWI76_RS25600 -2.2 -0.7 tRNA-Thr compare
BWI76_RS05075 -2.1 -0.7 type II secretion system protein GspG compare
BWI76_RS20360 -2.1 -0.7 cell division protein DedD compare
BWI76_RS05015 -2.1 -1.4 transcriptional regulator compare
BWI76_RS24500 -2.1 -2.4 urease subunit gamma compare
BWI76_RS27820 -2.1 -0.7 ilvB operon leader peptide IvbL compare
BWI76_RS16955 -2.0 -0.8 hypothetical protein compare
BWI76_RS19840 -2.0 -0.4 hypothetical protein compare
BWI76_RS23265 -2.0 -1.6 hypothetical protein compare
BWI76_RS02530 -2.0 -1.0 tRNA dimethylallyltransferase compare
BWI76_RS06485 -2.0 -1.7 cytochrome o ubiquinol oxidase subunit III compare
BWI76_RS07820 -2.0 -1.6 S-methyl-5-thioribose kinase compare
BWI76_RS01115 -2.0 -1.7 dTDP-4-amino-4,6-dideoxygalactose transaminase compare
BWI76_RS08275 -2.0 -1.6 LexA regulated protein compare
BWI76_RS09190 -1.9 -1.3 hypothetical protein compare
BWI76_RS09755 -1.9 -2.6 phosphoserine transaminase compare
BWI76_RS15920 -1.9 -1.1 hypothetical protein compare
BWI76_RS21310 -1.9 -1.0 DNA repair protein RecO compare
BWI76_RS26390 -1.9 -3.9 cell division protein FtsX compare
BWI76_RS24580 -1.9 -3.7 PTS-dependent dihydroxyacetone kinase operon transcriptional regulator DhaR compare
BWI76_RS21370 -1.9 -0.9 ATP-dependent RNA helicase SrmB compare
BWI76_RS09195 -1.9 -0.8 N-acetyltransferase compare
BWI76_RS00180 -1.9 -0.6 F0F1 ATP synthase subunit epsilon compare
BWI76_RS16935 -1.8 -1.2 shikimate dehydrogenase compare
BWI76_RS21375 -1.8 -0.6 autonomous glycyl radical cofactor GrcA compare
BWI76_RS00855 -1.8 -7.0 argininosuccinate lyase compare
BWI76_RS05120 -1.8 -5.4 bifunctional glycosyl transferase/transpeptidase compare
BWI76_RS17300 -1.8 -0.8 tRNA-Tyr compare
BWI76_RS22760 -1.8 -4.2 sulfite reductase subunit beta compare
BWI76_RS25065 -1.7 -2.6 polyribonucleotide nucleotidyltransferase compare
BWI76_RS13820 -1.7 -1.3 hypothetical protein compare
BWI76_RS18920 -1.7 -2.5 ATP phosphoribosyltransferase compare
BWI76_RS24740 -1.7 -2.0 GntR family transcriptional regulator compare
BWI76_RS24605 -1.7 -4.0 dihydroxyacetone kinase subunit DhaM compare
BWI76_RS19905 -1.7 -3.2 OmpK36 porin compare
BWI76_RS01220 -1.7 -4.1 DNA-dependent helicase II compare
BWI76_RS14915 -1.7 -2.5 hypothetical protein compare
BWI76_RS26665 -1.6 -2.4 DNA-binding response regulator compare
BWI76_RS23365 -1.6 -2.9 LysR family transcriptional regulator compare
BWI76_RS21675 -1.6 -0.5 hypothetical protein compare
BWI76_RS04470 -1.6 -5.7 carbamoyl phosphate synthase large subunit compare
BWI76_RS18950 -1.6 -4.1 imidazole glycerol phosphate synthase cyclase subunit compare
BWI76_RS09670 -1.6 -1.8 recombination factor protein RarA compare
BWI76_RS24900 -1.6 -0.7 DeoR family transcriptional regulator compare
BWI76_RS16515 -1.6 -1.3 LysR family transcriptional regulator compare
BWI76_RS21780 -1.6 -2.5 S-(hydroxymethyl)glutathione synthase compare
BWI76_RS04715 -1.5 -1.3 division/cell wall cluster transcriptional repressor MraZ compare
BWI76_RS26395 -1.5 -2.2 cell division protein FtsE compare
BWI76_RS01135 -1.5 -3.0 lipopolysaccharide N-acetylmannosaminouronosyltransferase compare
BWI76_RS16425 -1.5 -2.3 hypothetical protein compare
BWI76_RS25115 -1.5 -4.5 argininosuccinate synthase compare
BWI76_RS16260 -1.5 -1.2 two-component sensor histidine kinase compare
BWI76_RS01125 -1.5 -3.1 4-alpha-L-fucosyltransferase compare
BWI76_RS07065 -1.5 -5.2 5-(carboxyamino)imidazole ribonucleotide synthase compare
BWI76_RS01615 -1.5 -5.0 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase compare
BWI76_RS01080 -1.5 -4.5 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase compare
BWI76_RS20895 -1.5 -2.8 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
BWI76_RS06765 -1.4 -3.2 transcriptional regulator compare
BWI76_RS07115 -1.4 -3.7 hypothetical protein compare
BWI76_RS17975 -1.4 -2.5 tail-specific protease compare
BWI76_RS15110 -1.4 -3.1 putative excinuclease ABC subunit A compare
BWI76_RS09910 -1.4 -8.7 dihydroorotate dehydrogenase (quinone) compare
BWI76_RS10990 -1.4 -1.0 dihydroorotase compare
BWI76_RS10305 -1.4 -5.4 transposase compare
BWI76_RS08385 -1.4 -1.6 citrate (Si)-synthase compare
BWI76_RS05450 -1.4 -0.4 ribonuclease HI compare
BWI76_RS23580 -1.4 -1.5 hypothetical protein compare
BWI76_RS00355 -1.4 -0.7 DNA polymerase I compare
BWI76_RS15195 -1.4 -1.2 DUF4186 domain-containing protein compare
BWI76_RS04525 -1.4 -1.0 4-hydroxythreonine-4-phosphate dehydrogenase PdxA compare
BWI76_RS01610 -1.4 -4.5 phosphoribosylamine--glycine ligase compare
BWI76_RS20785 -1.4 -0.8 ethanolamine utilization protein EutJ compare
BWI76_RS07185 -1.4 -0.7 hypothetical protein compare
BWI76_RS23360 -1.4 -1.2 diaminopimelate decarboxylase compare
BWI76_RS06680 -1.4 -0.7 hypothetical protein compare
BWI76_RS24400 -1.4 -2.2 outer membrane channel protein TolC compare
BWI76_RS17720 -1.4 -0.3 muramoyltetrapeptide carboxypeptidase compare
BWI76_RS09825 -1.4 -1.7 envelope biogenesis factor ElyC compare
BWI76_RS08360 -1.4 -2.0 LamB/YcsF family protein compare
BWI76_RS00755 -1.4 -1.9 ATP-dependent protease subunit HslV compare
BWI76_RS11300 -1.3 -0.6 cupin compare
BWI76_RS12195 -1.3 -2.0 hypothetical protein compare
BWI76_RS26470 -1.3 -1.5 4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase compare
BWI76_RS22935 -1.3 -1.2 L-fucose mutarotase compare
BWI76_RS19700 -1.3 -1.4 deoxyribonuclease IV compare
BWI76_RS10935 -1.3 -2.6 glucan biosynthesis glucosyltransferase H compare
BWI76_RS15360 -1.3 -1.7 hypothetical protein compare
BWI76_RS25300 -1.3 -1.9 hybrid sensor histidine kinase/response regulator compare
BWI76_RS00715 -1.3 -0.9 two-component sensor histidine kinase compare
BWI76_RS17860 -1.3 -1.1 YoaH family protein compare
BWI76_RS18715 -1.3 -5.6 hypothetical protein compare
BWI76_RS12270 -1.3 -2.1 hypothetical protein compare
BWI76_RS22805 -1.3 -5.6 GTP diphosphokinase compare
BWI76_RS19200 -1.3 -1.8 binding-protein-dependent transport system inner membrane protein compare
BWI76_RS20965 -1.3 -2.2 phosphoribosylformylglycinamidine cyclo-ligase compare
BWI76_RS17775 -1.3 -1.8 hypothetical protein compare
BWI76_RS03415 -1.3 -2.3 LacI family transcriptional regulator compare
BWI76_RS03345 -1.3 -5.9 prophage P4 integrase compare
BWI76_RS13775 -1.3 -1.8 putative FMN-dependent luciferase-like monooxygenase compare
BWI76_RS26570 -1.3 -0.8 anion permease compare
BWI76_RS26440 -1.3 -0.7 hypothetical protein compare
BWI76_RS12375 -1.3 -3.2 DNA-invertase hin compare
BWI76_RS14390 -1.3 -0.9 hypothetical protein compare
BWI76_RS02725 -1.3 -0.6 HxlR family transcriptional regulator compare
BWI76_RS21460 -1.3 -0.7 translation inhibitor protein RaiA compare
BWI76_RS15690 -1.3 -2.0 hypothetical protein compare
BWI76_RS25700 -1.3 -2.8 heavy metal-responsive transcriptional regulator compare
BWI76_RS13770 -1.3 -1.9 alkylhydroperoxidase domain protein compare
BWI76_RS11205 -1.2 -2.4 transcription-repair coupling factor compare
BWI76_RS01185 -1.2 -0.8 adenylate cyclase compare
BWI76_RS19010 -1.2 -1.8 polysaccharide pyruvyl transferase yvff compare
BWI76_RS13490 -1.2 -2.3 pyrimidine-specific ribonucleoside hydrolase RihA compare
BWI76_RS02580 -1.2 -1.3 23S rRNA (guanosine(2251)-2'-O)-methyltransferase compare
BWI76_RS15530 -1.2 -1.8 hypothetical protein compare
BWI76_RS18815 -1.2 -1.5 nitrogenase molybdenum-iron protein alpha chain compare
BWI76_RS01110 -1.2 -2.5 TDP-fucosamine acetyltransferase compare
BWI76_RS17190 -1.2 -0.9 TonB system transport protein TonB compare
BWI76_RS12070 -1.2 -0.6 hypothetical protein compare
BWI76_RS02610 -1.2 -2.7 transcriptional regulator compare
BWI76_RS22120 -1.2 -2.2 glutamate--cysteine ligase compare
BWI76_RS14505 -1.2 -0.9 salicylate synthase Irp9 compare
BWI76_RS12450 -1.2 -1.5 phage shock protein PspA compare
BWI76_RS10900 -1.2 -2.6 putative oxidoreductase compare
BWI76_RS12235 -1.2 -1.4 hypothetical protein compare
BWI76_RS21250 -1.2 -3.6 two-component system response regulator GlrR compare
BWI76_RS22420 -1.2 -1.3 LacI family transcriptional regulator compare
BWI76_RS21685 -1.2 -0.6 hypothetical protein compare
BWI76_RS13250 -1.2 -0.9 cytochrome b561 compare
BWI76_RS23330 -1.2 -2.7 transcriptional regulator GalR compare
BWI76_RS12290 -1.2 -4.0 hypothetical protein compare
BWI76_RS00425 -1.1 -1.8 D-tyrosyl-tRNA(Tyr) deacylase compare
BWI76_RS27440 -1.1 -1.3 DNA helicase RecG compare
BWI76_RS18695 -1.1 -1.7 GntR family transcriptional regulator compare
BWI76_RS20640 -1.1 -2.1 cysteine synthase A compare
BWI76_RS06030 -1.1 -3.6 homocysteine S-methyltransferase compare
BWI76_RS01775 -1.1 -0.8 hypothetical protein compare
BWI76_RS12285 -1.1 -1.2 hypothetical protein compare
BWI76_RS26425 -1.1 -3.9 zinc/cadmium/mercury/lead-transporting ATPase compare
BWI76_RS23970 -1.1 -1.7 mechanosensitive ion channel protein MscS compare
BWI76_RS12345 -1.1 -1.9 nitrite transporter compare
BWI76_RS08205 -1.1 -2.9 DNA-binding transcriptional dual regulator NagC compare
BWI76_RS06295 -1.1 -2.3 S-adenosylmethionine:tRNA ribosyltransferase-isomerase compare
BWI76_RS06475 -1.1 -0.8 protoheme IX farnesyltransferase compare
BWI76_RS03010 -1.1 -3.9 ornithine carbamoyltransferase compare
BWI76_RS08430 -1.1 -2.8 succinate--CoA ligase subunit alpha compare
BWI76_RS18930 -1.1 -2.8 histidinol-phosphate transaminase compare
BWI76_RS05070 -1.1 -1.5 type II secretion system protein GspH compare
BWI76_RS04815 -1.1 -1.3 cell division protein ZapD compare
BWI76_RS20355 -1.1 -1.5 colicin V production protein compare
BWI76_RS09110 -1.1 -1.5 glutathione ABC transporter permease GsiD compare
BWI76_RS01200 -1.1 -0.5 diaminopimelate epimerase compare
BWI76_RS08040 -1.1 -1.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH compare
BWI76_RS14305 -1.1 -2.2 metallophosphoesterase compare
BWI76_RS27385 -1.1 -4.0 orotate phosphoribosyltransferase compare
BWI76_RS15835 -1.1 -1.3 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Klebsiella michiganensis M5al in mixed community experiments

For mixed community Mixed culture; Dyella japonica UNC79MFTsu3.2 3:1 starting OD to Klebsiella across organisms