Experiment set14IT037 for Klebsiella michiganensis M5al

Compare to:

RCH2_defined_noCarbon with Mixed culture; Ralstonia sp. UNC404CL21Col 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x

200 most important genes:

  gene name fitness t score description  
BWI76_RS26460 -4.8 -3.0 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
BWI76_RS18605 -4.6 -1.9 oxidoreductase molybdopterin-binding protein compare
BWI76_RS09625 -4.1 -1.0 hypothetical protein compare
BWI76_RS16955 -4.0 -1.0 hypothetical protein compare
BWI76_RS11610 -3.9 -1.8 glutamate dehydrogenase compare
BWI76_RS05015 -3.8 -1.8 transcriptional regulator compare
BWI76_RS25335 -3.6 -1.5 stringent starvation protein A compare
BWI76_RS08530 -3.6 -1.2 protein TolA compare
BWI76_RS19770 -3.6 -1.2 bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase compare
BWI76_RS15535 -3.5 -2.5 hypothetical protein compare
BWI76_RS20360 -3.5 -0.8 cell division protein DedD compare
BWI76_RS05075 -3.4 -0.8 type II secretion system protein GspG compare
BWI76_RS04715 -3.4 -1.1 division/cell wall cluster transcriptional repressor MraZ compare
BWI76_RS18920 -3.4 -2.9 ATP phosphoribosyltransferase compare
BWI76_RS23265 -3.4 -1.5 hypothetical protein compare
BWI76_RS01115 -3.3 -1.8 dTDP-4-amino-4,6-dideoxygalactose transaminase compare
BWI76_RS26890 -3.3 -1.1 hypothetical protein compare
BWI76_RS25645 -3.3 -6.2 shikimate dehydrogenase compare
BWI76_RS21475 -3.3 -3.5 bifunctional chorismate mutase/prephenate dehydrogenase compare
BWI76_RS14320 -3.2 -1.7 hypothetical protein compare
BWI76_RS27425 -3.2 -1.3 DNA-directed RNA polymerase subunit omega compare
BWI76_RS09670 -3.2 -2.9 recombination factor protein RarA compare
BWI76_RS11255 -3.1 -1.7 putrescine/spermidine ABC transporter ATP-binding protein compare
BWI76_RS00720 -3.1 -1.4 DNA-binding response regulator compare
BWI76_RS16315 -3.1 -1.0 SirA-like protein compare
BWI76_RS00965 -3.0 -0.7 acetolactate synthase 2 small subunit compare
BWI76_RS16200 -3.0 -1.4 NAD(P) transhydrogenase subunit beta compare
BWI76_RS22690 -2.9 -2.8 adenylyl-sulfate kinase compare
BWI76_RS01800 -2.9 -1.8 glucose-6-phosphate isomerase compare
BWI76_RS09640 -2.9 -1.7 cysteine/glutathione ABC transporter permease/ATP-binding protein CydD compare
BWI76_RS21310 -2.9 -1.2 DNA repair protein RecO compare
BWI76_RS15825 -2.9 -0.9 hypothetical protein compare
BWI76_RS21580 -2.9 -1.1 SsrA-binding protein compare
BWI76_RS08525 -2.9 -1.6 colicin transporter compare
BWI76_RS08210 -2.8 -0.9 N-acetylglucosamine-6-phosphate deacetylase compare
BWI76_RS06635 -2.8 -1.7 methylated-DNA--protein-cysteine methyltransferase compare
BWI76_RS21810 -2.8 -0.9 universal stress protein compare
BWI76_RS20380 -2.8 -0.6 tRNA pseudouridine(38-40) synthase TruA compare
BWI76_RS13160 -2.8 -1.6 azoreductase compare
BWI76_RS05235 -2.7 -0.9 hypothetical protein compare
BWI76_RS17980 -2.7 -3.4 RNA chaperone ProQ compare
BWI76_RS26455 -2.7 -2.0 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase compare
BWI76_RS27915 -2.7 -1.8 YceK/YidQ family lipoprotein compare
BWI76_RS05840 -2.6 -2.9 glutamate 5-kinase compare
BWI76_RS13820 -2.6 -1.4 hypothetical protein compare
BWI76_RS18930 -2.5 -3.7 histidinol-phosphate transaminase compare
BWI76_RS04160 -2.5 -2.8 phosphoserine phosphatase compare
BWI76_RS00875 -2.5 -4.4 DNA-binding transcriptional regulator FabR compare
BWI76_RS08385 -2.5 -2.8 citrate (Si)-synthase compare
BWI76_RS10640 -2.3 -3.0 AraC family transcriptional regulator compare
BWI76_RS10575 -2.3 -0.8 polar amino acid ABC transporter permease compare
BWI76_RS18955 -2.3 -4.2 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase compare
BWI76_RS15015 -2.3 -1.0 DUF2132 domain-containing protein compare
BWI76_RS14325 -2.2 -2.8 maturase compare
BWI76_RS25600 -2.2 -0.7 tRNA-Thr compare
BWI76_RS00845 -2.2 -7.4 N-acetyl-gamma-glutamyl-phosphate reductase compare
BWI76_RS19840 -2.2 -0.5 hypothetical protein compare
BWI76_RS25425 -2.2 -0.7 arginine repressor compare
BWI76_RS27820 -2.1 -0.7 ilvB operon leader peptide IvbL compare
BWI76_RS00850 -2.1 -9.0 acetylglutamate kinase compare
BWI76_RS23360 -2.1 -1.0 diaminopimelate decarboxylase compare
BWI76_RS03295 -2.1 -1.2 transposase compare
BWI76_RS16965 -2.1 -1.6 murein lipoprotein compare
BWI76_RS09730 -2.1 -0.7 pyruvate formate lyase 1-activating protein compare
BWI76_RS02530 -2.1 -1.1 tRNA dimethylallyltransferase compare
BWI76_RS07070 -2.1 -4.2 5-(carboxyamino)imidazole ribonucleotide mutase compare
BWI76_RS09190 -2.1 -1.4 hypothetical protein compare
BWI76_RS11170 -2.1 -1.0 hypothetical protein compare
BWI76_RS26390 -2.1 -3.5 cell division protein FtsX compare
BWI76_RS22765 -2.1 -6.5 sulfite reductase subunit alpha compare
BWI76_RS09760 -2.0 -2.1 3-phosphoshikimate 1-carboxyvinyltransferase compare
BWI76_RS07065 -2.0 -6.9 5-(carboxyamino)imidazole ribonucleotide synthase compare
BWI76_RS08495 -2.0 -4.1 cytochrome bd-I ubiquinol oxidase subunit I compare
BWI76_RS00855 -2.0 -5.2 argininosuccinate lyase compare
BWI76_RS01615 -2.0 -5.8 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase compare
BWI76_RS20350 -2.0 -5.5 amidophosphoribosyltransferase compare
BWI76_RS22840 -2.0 -1.4 transposase compare
BWI76_RS00180 -1.9 -0.6 F0F1 ATP synthase subunit epsilon compare
BWI76_RS01090 -1.9 -3.9 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) compare
BWI76_RS24885 -1.9 -0.7 PTS galactitol transporter subunit IIB compare
BWI76_RS13545 -1.9 -1.0 N-acetyltransferase compare
BWI76_RS21375 -1.9 -0.6 autonomous glycyl radical cofactor GrcA compare
BWI76_RS00345 -1.9 -3.2 protein disulfide oxidoreductase DsbA compare
BWI76_RS19010 -1.9 -1.8 polysaccharide pyruvyl transferase yvff compare
BWI76_RS08040 -1.9 -1.6 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH compare
BWI76_RS20440 -1.9 -1.8 50S ribosomal protein L3 N(5)-glutamine methyltransferase compare
BWI76_RS07285 -1.8 -4.1 LysR family transcriptional regulator compare
BWI76_RS23220 -1.8 -5.6 amino-acid N-acetyltransferase compare
BWI76_RS14505 -1.8 -1.6 salicylate synthase Irp9 compare
BWI76_RS21795 -1.8 -2.8 EAL domain-containing protein compare
BWI76_RS00240 -1.8 -1.2 FMN-binding protein MioC compare
BWI76_RS21265 -1.8 -8.5 phosphoribosylformylglycinamidine synthase compare
BWI76_RS10350 -1.8 -6.7 EamA family transporter compare
BWI76_RS03010 -1.8 -6.7 ornithine carbamoyltransferase compare
BWI76_RS04240 -1.8 -1.9 thr operon leader peptide compare
BWI76_RS24740 -1.8 -2.1 GntR family transcriptional regulator compare
BWI76_RS04470 -1.8 -5.5 carbamoyl phosphate synthase large subunit compare
BWI76_RS00835 -1.8 -6.9 phosphoenolpyruvate carboxylase compare
BWI76_RS07465 -1.8 -1.1 TetR family transcriptional regulator compare
BWI76_RS24955 -1.8 -1.8 hypothetical protein compare
BWI76_RS04645 -1.7 -2.4 3-dehydroquinase compare
BWI76_RS01220 -1.7 -3.7 DNA-dependent helicase II compare
BWI76_RS26395 -1.7 -4.5 cell division protein FtsE compare
BWI76_RS14870 -1.7 -1.1 hypothetical protein compare
BWI76_RS23480 -1.7 -10.8 EAL domain-containing protein compare
BWI76_RS20895 -1.7 -3.0 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
BWI76_RS24900 -1.7 -0.8 DeoR family transcriptional regulator compare
BWI76_RS26095 -1.7 -0.5 shikimate kinase compare
BWI76_RS24600 -1.6 -1.7 dihydroxyacetone kinase compare
BWI76_RS08520 -1.6 -1.1 colicin transporter TolQ compare
BWI76_RS12270 -1.6 -1.5 hypothetical protein compare
BWI76_RS00355 -1.6 -0.6 DNA polymerase I compare
BWI76_RS22755 -1.6 -2.3 phosphoadenosine phosphosulfate reductase compare
BWI76_RS01610 -1.6 -6.0 phosphoribosylamine--glycine ligase compare
BWI76_RS06765 -1.6 -3.0 transcriptional regulator compare
BWI76_RS25115 -1.6 -5.0 argininosuccinate synthase compare
BWI76_RS09755 -1.6 -2.6 phosphoserine transaminase compare
BWI76_RS13240 -1.6 -1.2 hypothetical protein compare
BWI76_RS15110 -1.6 -4.0 putative excinuclease ABC subunit A compare
BWI76_RS20355 -1.6 -1.7 colicin V production protein compare
BWI76_RS21070 -1.6 -1.2 outer membrane protein assembly factor BamB compare
BWI76_RS16425 -1.6 -2.1 hypothetical protein compare
BWI76_RS14075 -1.5 -1.0 TetR family transcriptional regulator compare
BWI76_RS21465 -1.5 -2.9 bifunctional chorismate mutase/prephenate dehydratase compare
BWI76_RS15695 -1.5 -2.2 hypothetical protein compare
BWI76_RS12420 -1.5 -0.8 peptide ABC transporter substrate-binding protein SapA compare
BWI76_RS23920 -1.5 -1.8 D-3-phosphoglycerate dehydrogenase compare
BWI76_RS20965 -1.5 -1.8 phosphoribosylformylglycinamidine cyclo-ligase compare
BWI76_RS15485 -1.5 -5.8 putative universal stress protein G compare
BWI76_RS17805 -1.5 -0.7 membrane protein compare
BWI76_RS25920 -1.5 -1.0 peptidylprolyl isomerase compare
BWI76_RS23860 -1.5 -1.6 protein disulfide oxidoreductase compare
BWI76_RS09335 -1.5 -0.8 baseplate assembly protein W compare
BWI76_RS11965 -1.5 -3.6 orotidine-5'-phosphate decarboxylase compare
BWI76_RS16375 -1.5 -2.1 electron transport complex subunit G compare
BWI76_RS11300 -1.5 -0.7 cupin compare
BWI76_RS05835 -1.5 -1.0 gamma-glutamyl-phosphate reductase compare
BWI76_RS18935 -1.5 -3.6 bifunctional imidazole glycerol-phosphate dehydratase/histidinol phosphatase compare
BWI76_RS01125 -1.5 -2.6 4-alpha-L-fucosyltransferase compare
BWI76_RS14105 -1.5 -3.7 NADH:ubiquinone reductase (Na(+)-transporting) subunit E compare
BWI76_RS05450 -1.5 -0.5 ribonuclease HI compare
BWI76_RS15920 -1.5 -1.0 hypothetical protein compare
BWI76_RS22070 -1.5 -2.2 proline/betaine ABC transporter permease ProW compare
BWI76_RS17975 -1.5 -1.5 tail-specific protease compare
BWI76_RS23365 -1.5 -2.5 LysR family transcriptional regulator compare
BWI76_RS09440 -1.5 -1.6 hypothetical protein compare
BWI76_RS00980 -1.5 -6.5 PLP-dependent threonine dehydratase compare
BWI76_RS17720 -1.5 -0.3 muramoyltetrapeptide carboxypeptidase compare
BWI76_RS15115 -1.5 -2.1 MFS transporter compare
BWI76_RS01940 -1.4 -2.1 hypothetical protein compare
BWI76_RS19460 -1.4 -1.5 lipoprotein compare
BWI76_RS27600 -1.4 -1.4 tRNA-Sec compare
BWI76_RS04245 -1.4 -6.6 bifunctional aspartate kinase/homoserine dehydrogenase I compare
BWI76_RS18950 -1.4 -3.6 imidazole glycerol phosphate synthase cyclase subunit compare
BWI76_RS02995 -1.4 -5.2 aspartate carbamoyltransferase compare
BWI76_RS24605 -1.4 -3.0 dihydroxyacetone kinase subunit DhaM compare
BWI76_RS04515 -1.4 -0.8 Co2+/Mg2+ efflux protein ApaG compare
BWI76_RS26570 -1.4 -0.8 anion permease compare
BWI76_RS14305 -1.4 -3.1 metallophosphoesterase compare
BWI76_RS04250 -1.4 -3.6 homoserine kinase compare
BWI76_RS26670 -1.4 -5.3 two-component sensor histidine kinase compare
BWI76_RS09910 -1.4 -7.3 dihydroorotate dehydrogenase (quinone) compare
BWI76_RS00990 -1.4 -5.3 ketol-acid reductoisomerase compare
BWI76_RS01185 -1.4 -0.8 adenylate cyclase compare
BWI76_RS25870 -1.3 -0.9 elongation factor Tu compare
BWI76_RS15840 -1.3 -3.9 prophage protein compare
BWI76_RS25270 -1.3 -2.4 ribosome hibernation promoting factor compare
BWI76_RS14375 -1.3 -2.1 hypothetical protein compare
BWI76_RS23515 -1.3 -1.4 antibiotic biosynthesis monooxygenase compare
BWI76_RS13980 -1.3 -1.3 hypothetical protein compare
BWI76_RS09030 -1.3 -2.5 transpeptidase compare
BWI76_RS24575 -1.3 -1.2 hypothetical protein compare
BWI76_RS01080 -1.3 -3.6 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase compare
BWI76_RS10900 -1.3 -2.0 putative oxidoreductase compare
BWI76_RS00400 -1.3 -0.5 glutamine synthetase compare
BWI76_RS05120 -1.3 -3.6 bifunctional glycosyl transferase/transpeptidase compare
BWI76_RS26665 -1.3 -1.4 DNA-binding response regulator compare
BWI76_RS18815 -1.3 -1.4 nitrogenase molybdenum-iron protein alpha chain compare
BWI76_RS15690 -1.3 -2.1 hypothetical protein compare
BWI76_RS00975 -1.3 -4.8 dihydroxy-acid dehydratase compare
BWI76_RS12400 -1.3 -4.5 TetR family transcriptional regulator compare
BWI76_RS06535 -1.3 -1.7 endopeptidase La compare
BWI76_RS09655 -1.3 -2.6 leucine-responsive regulatory protein compare
BWI76_RS12265 -1.3 -3.6 hypothetical protein compare
BWI76_RS09825 -1.2 -2.4 envelope biogenesis factor ElyC compare
BWI76_RS02775 -1.2 -2.8 outer membrane protein assembly factor compare
BWI76_RS18470 -1.2 -1.4 hypothetical protein compare
BWI76_RS18455 -1.2 -0.6 tRNA-Ser compare
BWI76_RS12150 -1.2 -2.0 DNA damage-inducible protein I compare
BWI76_RS08455 -1.2 -1.6 glutaminase compare
BWI76_RS27385 -1.2 -2.9 orotate phosphoribosyltransferase compare
BWI76_RS01205 -1.2 -1.1 DUF484 family protein compare
BWI76_RS27875 -1.2 -0.7 membrane protein compare
BWI76_RS01200 -1.2 -0.6 diaminopimelate epimerase compare
BWI76_RS12250 -1.2 -4.5 terminase compare
BWI76_RS25070 -1.2 -0.9 hypothetical protein compare
BWI76_RS18925 -1.2 -3.2 histidinol dehydrogenase compare
BWI76_RS10415 -1.2 -2.7 endoribonuclease L-PSP compare
BWI76_RS12285 -1.2 -1.3 hypothetical protein compare
BWI76_RS04270 -1.2 -2.0 transaldolase compare


Specific Phenotypes

For 1 genes in this experiment

For mixed community Mixed culture; Ralstonia sp. UNC404CL21Col 3:1 starting OD to Klebsiella in Klebsiella michiganensis M5al

For mixed community Mixed culture; Ralstonia sp. UNC404CL21Col 3:1 starting OD to Klebsiella across organisms