Experiment set14IT037 for Klebsiella michiganensis M5al

Compare to:

RCH2_defined_noCarbon with Mixed culture; Ralstonia sp. UNC404CL21Col 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x

200 most detrimental genes:

  gene name fitness t score description  
BWI76_RS18565 +2.3 2.2 pemk protein compare
BWI76_RS00140 +1.7 2.1 phosphate transport system regulator PhoU compare
BWI76_RS07985 +1.6 1.5 fluoride ion transporter CrcB compare
BWI76_RS17400 +1.5 1.6 transporter compare
BWI76_RS14775 +1.5 2.0 creatinine amidohydrolase compare
BWI76_RS19310 +1.5 3.2 ABC transporter permease compare
BWI76_RS03595 +1.5 2.6 ethanolamine utilization protein EutM compare
BWI76_RS02725 +1.4 1.3 HxlR family transcriptional regulator compare
BWI76_RS16685 +1.4 2.0 peptide ABC transporter permease compare
BWI76_RS01585 +1.4 3.3 transcriptional regulator compare
BWI76_RS20155 +1.4 1.8 NADH-quinone oxidoreductase subunit I compare
BWI76_RS26085 +1.3 0.6 3-dehydroquinate synthase compare
BWI76_RS17945 +1.3 1.3 hypothetical protein compare
BWI76_RS26405 +1.3 1.2 16S rRNA (guanine(966)-N(2))-methyltransferase compare
BWI76_RS05790 +1.3 1.4 phage DNA-binding protein compare
BWI76_RS20375 +1.3 1.8 membrane protein compare
BWI76_RS22450 +1.3 2.5 selenoprotein W-related protein compare
BWI76_RS25485 +1.2 1.9 septum formation protein Maf compare
BWI76_RS11900 +1.2 1.0 cob(I)yrinic acid a,c-diamide adenosyltransferase compare
BWI76_RS15955 +1.2 1.7 transcriptional regulator compare
BWI76_RS24035 +1.2 2.9 hypothetical protein compare
BWI76_RS19375 +1.2 1.3 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase compare
BWI76_RS16795 +1.2 2.3 amino acid ABC transporter ATPase compare
BWI76_RS14755 +1.2 2.8 SIS domain-containing protein compare
BWI76_RS14835 +1.2 1.7 hypothetical protein compare
BWI76_RS06130 +1.2 2.0 extensin family protein compare
BWI76_RS03045 +1.2 1.6 hypothetical protein compare
BWI76_RS05050 +1.1 3.9 general secretion pathway protein GspL compare
BWI76_RS07730 +1.1 0.6 iron-enterobactin transporter membrane protein compare
BWI76_RS23705 +1.1 3.1 2-deoxy-D-ribonyl-CoA 3-dehydrogenase (from data) compare
BWI76_RS14430 +1.1 2.6 peptidase C45 compare
BWI76_RS04565 +1.1 3.0 bifunctional tRNA pseudouridine(32) synthase/ribosomal large subunit pseudouridine synthase RluA compare
BWI76_RS06830 +1.1 2.3 recombination protein RecR compare
BWI76_RS21945 +1.1 1.2 LysR family transcriptional regulator compare
BWI76_RS09610 +1.1 1.3 ATP-dependent Clp protease adaptor ClpS compare
BWI76_RS25545 +1.1 2.7 hypothetical protein compare
BWI76_RS01835 +1.1 3.3 chemotaxis protein CheW compare
BWI76_RS16870 +1.0 3.0 LysR family transcriptional regulator compare
BWI76_RS11815 +1.0 1.1 hypothetical protein compare
BWI76_RS08645 +1.0 1.9 molybdate ABC transporter substrate-binding protein compare
BWI76_RS19275 +1.0 1.5 DNA-binding response regulator compare
BWI76_RS09860 +1.0 1.6 hypothetical protein compare
BWI76_RS00865 +1.0 2.2 DNA-binding transcriptional regulator OxyR compare
BWI76_RS24745 +1.0 2.8 membrane protein compare
BWI76_RS08380 +1.0 1.1 endonuclease VIII compare
BWI76_RS12825 +1.0 2.1 hypothetical protein compare
BWI76_RS14965 +1.0 2.1 AraC family transcriptional regulator compare
BWI76_RS12585 +1.0 3.3 transcriptional regulator compare
BWI76_RS14680 +1.0 2.2 SefF compare
BWI76_RS20760 +1.0 2.0 ethanolamine ammonia-lyase small subunit compare
BWI76_RS03040 +1.0 1.6 leucyl aminopeptidase compare
BWI76_RS09615 +1.0 1.5 ATP-dependent Clp protease ATP-binding subunit ClpA compare
BWI76_RS13415 +1.0 1.7 spermidine/putrescine ABC transporter permease compare
BWI76_RS15435 +1.0 0.9 hypothetical protein compare
BWI76_RS14805 +1.0 1.8 hypothetical protein compare
BWI76_RS23030 +1.0 1.8 cobalamin biosynthesis protein CbiM compare
BWI76_RS10745 +0.9 0.6 hypothetical protein compare
BWI76_RS20915 +0.9 4.0 peroxiredoxin compare
BWI76_RS20430 +0.9 2.3 penicillin-insensitive murein endopeptidase compare
BWI76_RS16290 +0.9 1.9 Mal regulon transcriptional regulator MalI compare
BWI76_RS14540 +0.9 1.8 yersiniabactin biosynthetic protein YbtU compare
BWI76_RS10815 +0.9 2.4 iron permease compare
BWI76_RS01325 +0.9 1.4 twin-arginine translocase subunit TatB compare
BWI76_RS19330 +0.9 0.6 HAD family hydrolase compare
BWI76_RS08345 +0.9 1.5 Nif3-like dinuclear metal center protein compare
BWI76_RS14825 +0.9 1.5 dienelactone hydrolase family protein compare
BWI76_RS09080 +0.9 2.4 molybdopterin-synthase adenylyltransferase MoeB compare
BWI76_RS12550 +0.9 1.0 hypothetical protein compare
BWI76_RS04620 +0.9 3.2 transcriptional regulator SgrR compare
BWI76_RS24925 +0.9 2.0 DnaA initiator-associating protein DiaA compare
BWI76_RS19340 +0.9 3.2 xylulokinase compare
BWI76_RS23690 +0.9 1.4 putative glyoxalase/bleomycin resistance protein/dioxygenase compare
BWI76_RS01565 +0.9 1.4 NADH pyrophosphatase compare
BWI76_RS00375 +0.9 2.1 hypothetical protein compare
BWI76_RS05645 +0.9 2.0 fructuronate reductase compare
BWI76_RS19700 +0.9 1.4 deoxyribonuclease IV compare
BWI76_RS14435 +0.9 0.9 glutamine ABC transporter ATP-binding protein compare
BWI76_RS11790 +0.9 1.7 acyl-CoA thioesterase compare
BWI76_RS04605 +0.9 1.3 thiamine ABC transporter ATP-binding protein compare
BWI76_RS14040 +0.9 1.1 thiaminase compare
BWI76_RS25375 +0.9 1.3 hypothetical protein compare
BWI76_RS10840 +0.9 2.8 membrane protein compare
BWI76_RS16220 +0.8 1.1 hypothetical protein compare
BWI76_RS17200 +0.8 1.6 hypothetical protein compare
BWI76_RS12595 +0.8 1.4 hypothetical protein compare
BWI76_RS19710 +0.8 2.6 NupC/NupG family nucleoside CNT transporter compare
BWI76_RS00795 +0.8 2.1 carboxymuconolactone decarboxylase compare
BWI76_RS05570 +0.8 0.6 hypothetical protein compare
BWI76_RS13505 +0.8 2.7 putative receptor compare
BWI76_RS18410 +0.8 1.5 drug/metabolite exporter YedA compare
BWI76_RS19775 +0.8 2.0 phage resistance protein compare
BWI76_RS06080 +0.8 2.1 taurine dioxygenase compare
BWI76_RS15270 +0.8 2.4 phenazine biosynthesis protein PhzF family compare
BWI76_RS12875 +0.8 2.8 bifunctional deaminase-reductase compare
BWI76_RS17190 +0.8 0.9 TonB system transport protein TonB compare
BWI76_RS16095 +0.8 3.0 thiamine biosynthesis protein ApbE compare
BWI76_RS16035 +0.8 1.9 biotin-independent malonate decarboxylase subunit beta compare
BWI76_RS23965 +0.8 2.3 arginine exporter protein compare
BWI76_RS15775 +0.8 1.4 replication protein compare
BWI76_RS07735 +0.8 4.3 MFS transporter compare
BWI76_RS11435 +0.8 1.2 hypothetical protein compare
BWI76_RS21340 +0.8 0.8 SoxR reducing system protein RseC compare
BWI76_RS23195 +0.8 1.7 ethanolamine utilization protein EutP compare
BWI76_RS15985 +0.8 2.5 LysR family transcriptional regulator compare
BWI76_RS18270 +0.8 1.6 hypothetical protein compare
BWI76_RS21245 +0.8 1.5 nitrogen regulatory protein P-II compare
BWI76_RS22215 +0.8 3.9 PTS sorbitol transporter subunit IIC compare
BWI76_RS19160 +0.8 2.4 histidine kinase compare
BWI76_RS10380 +0.8 3.5 polar amino acid ABC transporter inner membrane subunit compare
BWI76_RS04050 +0.8 1.5 hydroxamate siderophore iron reductase FhuF compare
BWI76_RS07805 +0.8 1.0 sugar ABC transporter permease compare
BWI76_RS21980 +0.8 1.4 hypothetical protein compare
BWI76_RS09300 +0.8 1.5 phage lysozyme compare
BWI76_RS24260 +0.8 2.0 hypothetical protein compare
BWI76_RS16080 +0.8 2.9 LysR family transcriptional regulator compare
BWI76_RS01195 +0.8 0.9 membrane protein compare
BWI76_RS16300 +0.8 1.3 bifunctional beta-cystathionase/maltose regulon regulatory protein compare
BWI76_RS18675 +0.8 2.0 fimbrial protein compare
BWI76_RS13175 +0.8 1.2 NodT family RND efflux system outer membrane lipoprotein compare
BWI76_RS15975 +0.8 0.5 hypothetical protein compare
BWI76_RS07740 +0.8 0.8 Fe2+-enterobactin ABC transporter substrate-binding protein compare
BWI76_RS13295 +0.8 3.6 DUF1338 domain-containing protein compare
BWI76_RS06540 +0.8 1.5 DNA-binding protein HU-beta compare
BWI76_RS07920 +0.8 1.9 methionine aminotransferase compare
BWI76_RS15440 +0.8 1.9 hypothetical protein compare
BWI76_RS25430 +0.7 2.2 membrane protein compare
BWI76_RS27945 +0.7 1.4 2-oxo-3-deoxygalactonate kinase compare
BWI76_RS06225 +0.7 1.9 exonuclease sbcCD subunit D compare
BWI76_RS22515 +0.7 3.7 acyl dehydratase compare
BWI76_RS27735 +0.7 2.1 hypothetical protein compare
BWI76_RS11750 +0.7 2.0 chitooligosaccharide deacetylase compare
BWI76_RS04095 +0.7 1.6 dUMP phosphatase compare
BWI76_RS23465 +0.7 2.4 oxidoreductase compare
BWI76_RS10820 +0.7 1.2 iron uptake system protein EfeO compare
BWI76_RS15980 +0.7 1.4 lysine transporter LysE compare
BWI76_RS19360 +0.7 1.7 glucose dehydrogenase compare
BWI76_RS08650 +0.7 1.3 molybdate ABC transporter permease compare
BWI76_RS24135 +0.7 1.7 c4-dicarboxylate permease compare
BWI76_RS13945 +0.7 1.5 lysine exporter protein LysE/YggA compare
BWI76_RS07255 +0.7 2.3 hypothetical protein compare
BWI76_RS19240 +0.7 1.0 ABC transporter substrate-binding protein compare
BWI76_RS08765 +0.7 1.2 8-amino-7-oxononanoate synthase compare
BWI76_RS27675 +0.7 3.1 EmrB/QacA family drug resistance transporter compare
BWI76_RS21690 +0.7 0.8 hypothetical protein compare
BWI76_RS03925 +0.7 2.1 N-acetyltransferase GCN5 compare
BWI76_RS00710 +0.7 1.1 6-N-hydroxylaminopurine resistance protein compare
BWI76_RS15075 +0.7 1.7 non-ribosomal peptide synthase compare
BWI76_RS24970 +0.7 3.3 peptidase U32 compare
BWI76_RS23055 +0.7 1.3 cobalamin biosynthesis protein CbiG compare
BWI76_RS11335 +0.7 0.9 tautomerase compare
BWI76_RS02720 +0.7 2.1 NAD(P)-dependent oxidoreductase compare
BWI76_RS23820 +0.7 1.9 flavodoxin FldB compare
BWI76_RS00825 +0.7 2.7 AraC family transcriptional regulator compare
BWI76_RS16480 +0.7 1.0 lactoylglutathione lyase compare
BWI76_RS10570 +0.7 2.8 cysteine ABC transporter substrate-binding protein compare
BWI76_RS24730 +0.7 2.7 uronate isomerase compare
BWI76_RS06665 +0.7 1.7 membrane protein compare
BWI76_RS02740 +0.7 2.8 putative transcriptional regulator compare
BWI76_RS27555 +0.7 2.8 putative sugar kinase/transcriptional regulator, ATPase domain protein compare
BWI76_RS15080 +0.7 5.5 hypothetical protein compare
BWI76_RS15190 +0.7 1.8 GGDEF domain-containing protein compare
BWI76_RS18575 +0.7 1.0 transcriptional regulator compare
BWI76_RS08450 +0.7 1.5 fumarate hydratase compare
BWI76_RS10760 +0.7 3.0 nitroreductase family protein compare
BWI76_RS26660 +0.7 1.5 transcription elongation factor GreB compare
BWI76_RS25915 +0.7 1.7 protein SlyX compare
BWI76_RS12565 +0.7 2.6 SAM-dependent methyltransferase compare
BWI76_RS11915 +0.7 3.0 protease SohB compare
BWI76_RS00065 +0.7 1.7 MurR/RpiR family transcriptional regulator compare
BWI76_RS02180 +0.7 0.8 hypothetical protein compare
BWI76_RS01840 +0.7 1.9 maltose ABC transporter, ATPase component (MalK) (from data) compare
BWI76_RS21485 +0.7 2.6 DUF4154 domain-containing protein compare
BWI76_RS03700 +0.7 1.5 hypothetical protein compare
BWI76_RS02925 +0.7 2.7 type IV secretion protein Rhs compare
BWI76_RS06235 +0.7 2.4 PAS domain-containing sensor histidine kinase compare
BWI76_RS10270 +0.7 2.2 acetylornithine deacetylase compare
BWI76_RS12235 +0.7 1.4 hypothetical protein compare
BWI76_RS13480 +0.7 0.6 XRE family transcriptional regulator compare
BWI76_RS23185 +0.7 2.4 propanediol utilization: polyhedral bodies pduT compare
BWI76_RS00335 +0.7 1.0 hypothetical protein compare
BWI76_RS11605 +0.7 2.9 DNA topoisomerase III compare
BWI76_RS08815 +0.7 4.1 cyclic pyranopterin phosphate synthase compare
BWI76_RS01330 +0.7 1.2 twin-arginine translocase subunit TatC compare
BWI76_RS14665 +0.7 2.1 minor fimbrial subunit YfcQ compare
BWI76_RS01995 +0.7 0.9 AraC family transcriptional regulator compare
BWI76_RS18130 +0.7 2.1 zinc ABC transporter substrate-binding protein compare
BWI76_RS23725 +0.7 2.1 2-deoxy-D-ribonate transporter 2 (from data) compare
BWI76_RS09475 +0.7 1.6 putrescine ABC transporter permease PotI compare
BWI76_RS22855 +0.7 1.1 hypothetical protein compare
BWI76_RS07995 +0.7 2.0 twin-arginine translocase subunit TatA compare
BWI76_RS23505 +0.7 4.1 ferrous iron transporter B compare
BWI76_RS12910 +0.7 1.3 3,4-dihydroxyphenylacetate 2,3-dioxygenase compare
BWI76_RS22630 +0.7 1.5 LysR family transcriptional regulator compare
BWI76_RS16355 +0.7 1.1 electron transport complex subunit A compare
BWI76_RS23895 +0.7 0.4 Xaa-Pro aminopeptidase compare
BWI76_RS04060 +0.7 1.3 hypothetical protein compare
BWI76_RS13840 +0.7 1.3 MBL fold metallo-hydrolase compare
BWI76_RS16850 +0.7 2.1 ABC transporter periplasmic substrate-binding protein compare
BWI76_RS10890 +0.7 1.7 glyoxylate/hydroxypyruvate reductase A compare
BWI76_RS07265 +0.7 2.1 ABC transporter ATP-binding protein compare


Specific Phenotypes

For 1 genes in this experiment

For mixed community Mixed culture; Ralstonia sp. UNC404CL21Col 3:1 starting OD to Klebsiella in Klebsiella michiganensis M5al

For mixed community Mixed culture; Ralstonia sp. UNC404CL21Col 3:1 starting OD to Klebsiella across organisms