Experiment set14IT035 for Sinorhizobium meliloti 1021

Compare to:

palatinose hydrate carbon source

200 most important genes:

  gene name fitness t score description  
SMc02766 -8.5 -10.1 tryptophan synthase subunit beta compare
SMc02899 -8.4 -5.8 prephenate dehydratase compare
SMc02123 -8.2 -3.3 required for sulfate utilization, putative electron transport protein for sulfite reductase (from data) compare
SMc01843 -8.1 -5.6 5,10-methylenetetrahydrofolate reductase compare
SMc04405 -8.0 -5.5 3-isopropylmalate dehydrogenase compare
SMc00640 -7.7 -5.3 phosphoserine aminotransferase compare
SMc00235 -7.5 -7.3 anthranilate phosphoribosyltransferase compare
SM_b21175 -7.5 -5.2 phosphate uptake ABC transporter permease compare
SMc02767 -7.4 -8.9 N-(5'-phosphoribosyl)anthranilate isomerase compare
SMc00614 -7.4 -5.1 phosphoribosylglycinamide formyltransferase compare
SMc03797 -7.4 -10.1 homoserine O-succinyltransferase compare
SMc04045 -7.4 -5.1 dihydroxy-acid dehydratase compare
SMc01054 -7.4 -5.1 required for sulfate utilization, putative electron source for sulfite reductase CysI (from data) compare
SMc02569 -7.3 -5.1 imidazole glycerol phosphate synthase subunit HisF compare
SMc02717 -7.3 -5.1 2-isopropylmalate synthase compare
SMc01726 -7.3 -5.1 acetylglutamate kinase compare
SMc00917 -7.2 -5.0 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) compare
SMc02245 -7.1 -4.9 dihydroorotate dehydrogenase 2 compare
SMc04028 -7.0 -12.6 glutamate synthase compare
SMc02725 -6.9 -11.5 anthranilate synthase compare
SMc03895 -6.9 -14.0 pyruvate carboxylase compare
SMc01431 -6.9 -8.2 acetolactate synthase 3 catalytic subunit compare
SMc02572 -6.8 -5.4 imidazole glycerol phosphate synthase subunit HisH compare
SMc03112 -6.7 -15.6 B12-dependent methionine synthase compare
SMc00488 -6.5 -15.8 phosphoribosylformylglycinamidine synthase II compare
SMc02217 -6.5 -6.4 O-succinylhomoserine sulfhydrylase compare
SMc01494 -6.5 -12.0 phosphoserine phosphatase compare
SMc02570 -6.5 -8.3 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
SMc03777 -6.4 -6.3 gamma-glutamyl phosphate reductase compare
SMa1635 -6.4 -2.5 hypothetical protein compare
SMc04026 -6.2 -9.9 glutamate synthase compare
SMc00993 -6.2 -10.4 phosphoribosylamine--glycine ligase compare
SMc03823 -6.1 -12.0 isopropylmalate isomerase large subunit compare
SMc01004 -6.1 -10.1 phosphoribosyl-AMP cyclohydrolase compare
SMc00615 -6.1 -11.8 phosphoribosylaminoimidazole synthetase compare
SMc00918 -6.1 -10.2 ATP phosphoribosyltransferase regulatory subunit compare
SMc00493 -6.0 -5.9 phosphoribosylformylglycinamidine synthase I compare
SMc02765 -5.9 -10.7 tryptophan synthase subunit alpha compare
SM_b21176 -5.9 -4.1 phosphate uptake ABC transporter substrate-binding protein precursor compare
SMc00711 -5.9 -5.1 cyclohexadienyl dehydrogenase compare
SMc02124 -5.8 -13.1 nitrite reductase compare
SMc03070 -5.8 -8.9 glucose-6-phosphate 1-dehydrogenase compare
SMc00495 -5.8 -5.3 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
SMc01881 -5.8 -4.0 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
SMc01361 -5.7 -4.0 dihydroorotase compare
SMc02307 -5.7 -5.5 histidinol dehydrogenase compare
SMc00554 -5.6 -6.7 amidophosphoribosyltransferase compare
SMc00236 -5.6 -5.7 Indole-3-glycerol phosphate synthase compare
SMc01801 -5.6 -3.8 N-acetylglutamylphosphate reductase (EC 1.2.1.38) (from data) compare
SMc00815 -5.6 -3.8 inosine 5'-monophosphate dehydrogenase compare
SMc02574 -5.5 -7.6 imidazoleglycerol-phosphate dehydratase compare
SMc00131 -5.5 -14.6 transcriptional regulator compare
SMc00091 -5.4 -12.2 sulfate adenylyltransferase compare
SMc04088 -5.4 -10.1 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
SM_b21174 -5.4 -6.5 phosphate uptake ABC transporter permease compare
SMc03763 -5.4 -3.7 cytosine-specific methyltransferase compare
SMc00293 -5.3 -14.2 homoserine dehydrogenase compare
SMc00412 -5.3 -3.7 orotidine 5'-phosphate decarboxylase compare
SMc00092 -5.1 -13.8 phosphoadenosine phosphosulfate reductase compare
SMc00090 -5.0 -9.6 sulfate adenylyltransferase compare
SMc02707 -5.0 -6.6 hypothetical protein compare
SM_b20327 -4.8 -8.9 ABC transporter for D-trehalose/D-maltose/sucrose, permease component 2 (ThuG) (from data) conserved
SM_b20326 -4.8 -8.7 ABC transporter for D-trehalose/D-maltose/sucrose, permease component 1 (ThuF) (from data) conserved
SMc00876 -4.8 -6.6 ATP-binding MRP protein compare
SMc01360 -4.8 -4.6 aspartate carbamoyltransferase catalytic subunit compare
SMc01206 -4.6 -2.6 queuine tRNA-ribosyltransferase compare
SMc00494 -4.6 -2.6 phosphoribosylformylglycinamidine synthase subunit PurS compare
SMc03776 -4.5 -4.4 gamma-glutamyl kinase compare
SMc02755 -4.5 -7.7 S-adenosyl-L-homocysteine hydrolase compare
SMc02137 -4.5 -4.3 ornithine carbamoyltransferase compare
SMc04002 -4.5 -5.1 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
SM_b20330 -4.5 -7.0 glucoside 3-dehydrogenase; active on raffinose or trehalose (thuB) (EC 1.1.99.13) (from data) conserved
SMc02165 -4.5 -8.0 orotate phosphoribosyltransferase compare
SMc03795 -4.2 -2.3 isopropylmalate isomerase small subunit compare
SMc01880 -4.2 -2.9 pantoate--beta-alanine ligase compare
SM_b20329 -4.2 -9.2 required for glucoside 3-dehydrogenase activity on raffinose or trehalose (thuA) (EC 1.1.99.13) (from data) compare
SM_b20325 -4.2 -13.3 ABC transporter for D-trehalose/D-maltose/sucrose, substrate-binding component (ThuE) (from data) conserved
SMc02166 -4.1 -10.1 dihydroorotase compare
SMc03826 -4.1 -2.8 argininosuccinate synthase compare
SMc02246 -3.9 -1.5 hypothetical protein compare
SMc04346 -3.8 -4.7 ketol-acid reductoisomerase compare
SMc00641 -3.8 -6.0 D-3-phosphoglycerate dehydrogenase compare
SM_b20328 -3.8 -11.1 ABC transporter for D-trehalose/D-maltose/sucrose, ATPase component (ThuK) (from data) conserved
SMc01770 -3.7 -1.6 serine hydroxymethyltransferase compare
SMc02138 -3.7 -5.3 acetylornithine transaminase compare
SMc02425 -3.7 -5.3 transcriptional regulator compare
SM_b21177 -3.7 -6.8 phosphate uptake ABC transporter ATP-binding protein compare
SMc01053 -3.7 -5.0 siroheme synthase compare
SMc02833 -3.7 -3.5 penicillin-insensitive murein endopeptidase compare
SMc00017 -3.6 -1.9 homoserine kinase compare
SMc03978 -3.6 -2.5 transketolase compare
SMc03229 -3.5 -2.5 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase compare
SMc00294 -3.5 -11.1 aminotransferase compare
SMc03981 -3.3 -3.4 phosphoglycerate kinase compare
SMc03069 -3.3 -3.8 6-phosphogluconolactonase compare
SMc04001 -3.3 -1.8 phosphoribosylaminoimidazole carboxylase catalytic subunit protein compare
SMc01215 -3.2 -2.2 carbamoyl phosphate synthase large subunit compare
SMc03068 -3.2 -9.0 phosphogluconate dehydratase compare
SMc03979 -3.1 -2.9 glyceraldehyde-3-phosphate dehydrogenase compare
SMc00405 -3.0 -8.6 hypothetical protein compare
SMc01842 -2.9 -3.0 methyltransferase transcription regulator protein compare
SMc01124 -2.8 -6.3 PII uridylyl-transferase compare
SMc01569 -2.8 -1.5 carbamoyl phosphate synthase small subunit compare
SMc01578 -2.8 -12.2 aspartate aminotransferase compare
SMc00302 -2.6 -5.0 hypothetical protein compare
SMc01430 -2.6 -4.9 acetolactate synthase 3 regulatory subunit compare
SMc01441 -2.4 -7.4 membrane bound protease compare
SM_b21173 -2.3 -2.9 hypothetical protein compare
SMa0789 -2.2 -4.9 GntR family transcriptional regulator compare
SMc00928 -2.1 -2.0 signal peptide protein compare
SMc00726 -2.1 -1.1 thiol:disulfide interchange redox-active center transmembrane protein compare
SMc01183 -2.0 -2.3 LexA repressor compare
SMc04005 -2.0 -6.5 pyruvate kinase compare
SMc00450 -2.0 -3.8 protoheme IX farnesyltransferase compare
SMc02505 -1.9 -2.5 hypothetical protein compare
SMc02164 -1.9 -3.2 fructokinase compare
SMc01147 -1.8 -4.9 coproporphyrinogen III oxidase compare
SMc03140 -1.8 -5.9 transcriptional regulator compare
SMc02434 -1.8 -3.2 hypothetical protein compare
SMc00451 -1.8 -6.0 processing protease compare
SMc04085 -1.8 -5.4 hypothetical protein compare
SMc01440 -1.8 -6.8 hydrolase serine protease transmembrane protein compare
SMc02983 -1.8 -5.9 ornithine, DAP, or arginine decarboxylase compare
SMa1924 -1.8 -1.2 hypothetical protein compare
SMc00053 -1.7 -1.1 monovalent cation/H+ antiporter subunit C compare
SMc01028 -1.7 -9.9 phosphopyruvate hydratase compare
SMc00914 -1.6 -4.1 oxidoreductase compare
SMc02838 -1.6 -7.1 phosphoglyceromutase compare
SMc03974 -1.6 -3.4 hypothetical protein compare
SMc01850 -1.5 -3.2 hypothetical protein compare
SMc02147 -1.5 -3.9 phosphate regulon sensor histidine kinase transmembrane protein compare
SMc04213 -1.5 -2.2 diacylglycerol kinase compare
SMc00073 -1.5 -1.9 hypothetical protein compare
SMc00982 -1.5 -5.4 dioxygenase compare
SMc03153 -1.4 -3.1 keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase compare
SMc03924 -1.4 -7.1 glycogen synthase compare
SMc01187 -1.4 -2.1 rare lipoprotein A compare
SMc00619 -1.4 -1.6 hypothetical protein compare
SMc02234 -1.3 -3.4 hypothetical protein compare
SMc02363 -1.3 -2.1 cytochrome C-type biogenesis transmembrane protein compare
SMc01852 -1.3 -6.8 pyrophosphate--fructose-6-phosphate 1-phosphotransferase compare
SMc02844 -1.3 -1.8 transcriptional regulator compare
SMc02373 -1.2 -1.6 hypothetical protein compare
SMa0144 -1.2 -1.1 hypothetical protein compare
SMc02144 -1.2 -4.2 phosphate ABC transporter permease compare
SMc00414 -1.2 -8.7 hypothetical protein compare
SMc03993 -1.2 -5.2 hypothetical protein compare
SMc03050 -1.2 -2.3 flagellar biosynthesis regulatory protein FlaF compare
SMc02142 -1.2 -4.5 phosphate transporter ATP-binding protein compare
SMc00288 -1.2 -5.2 signal peptide protein compare
SMc02058 -1.2 -2.2 YAJC protein compare
SMc01447 -1.2 -1.3 hypothetical protein compare
SM_b20948 -1.2 -1.9 glucosyltransferase compare
SMc02510 -1.1 -1.0 ferric uptake regulation protein compare
SMc00511 -1.1 -4.7 D-ribulose-5-phosphate 3-epimerase compare
SMc02143 -1.1 -3.6 phosphate ABC transporter permease compare
SMc01042 -1.1 -4.5 nitrogen regulation protein compare
SMc02362 -1.1 -1.7 cytochrome c-type biogenesis protein CcmE compare
SMc02140 -1.1 -2.0 phosphate regulon transcriptional regulatory protein compare
SMc01041 -1.1 -3.5 NIFR3-like protein compare
SMc01007 -1.1 -2.1 hypothetical protein compare
SMc03161 -1.1 -5.5 oxidoreductase compare
SMa5010 -1.1 -1.5 hypothetical protein compare
SMc01501 -1.0 -2.5 mannitol 2-dehydrogenase compare
SM_b20143 -1.0 -1.3 oligopeptide ABC transporter permease compare
SMc04348 -1.0 -0.9 transcriptional regulator compare
SMc00099 -1.0 -1.9 alkylphosphonate uptake protein compare
SMc01144 -1.0 -3.2 ribonuclease PH compare
SMa1570 -1.0 -1.8 PilA2 pilus assembly protein compare
SMc00013 -1.0 -1.9 cytochrome C oxidase subunit III transmembrane protein compare
SMc01368 -1.0 -3.6 transport transmembrane protein compare
SM_b20746 -1.0 -1.0 hypothetical protein compare
SMc02495 -1.0 -1.8 translaldolase compare
SMc00239 -1.0 -1.0 hypothetical protein compare
SMc02812 -1.0 -1.8 hypothetical protein compare
SMa0955 -1.0 -1.7 GntR family transcriptional regulator compare
SMc02897 -0.9 -3.0 cytochrome C transmembrane protein compare
SMc00010 -0.9 -1.7 cytochrome C oxidase polypeptide I transmembrane protein compare
SMc02713 -0.9 -1.6 RNA polymerase sigma-E factor (sigma-24) protein compare
SMc01364 -0.9 -1.0 DNA topoisomerase I compare
SMc02724 -0.9 -2.1 hypothetical protein compare
SMc01472 -0.9 -1.0 50S ribosomal protein L11 methyltransferase compare
SMa2020 -0.9 -4.6 Transcriptional regulator compare
SMc02677 -0.9 -3.1 pyrroline-5-carboxylate reductase compare
SMc01043 -0.9 -4.5 nitrogen assimilation regulatory protein compare
SMa1045 -0.9 -3.0 hypothetical protein compare
SMc02141 -0.9 -2.7 phosphate transporter PhoU compare
SMc01207 -0.9 -1.4 S-adenosylmethionine--tRNA ribosyltransferase-isomerase compare
SMc01208 -0.8 -1.0 peptidyl-prolyl cis-trans isomerase B protein compare
SMc01097 -0.8 -2.3 hypothetical protein compare
SM_b21181 -0.8 -3.9 glutaryl-CoA dehydrogenase compare
SMc03046 -0.8 -3.6 transcriptional regulator compare
SMc03878 -0.8 -2.6 acetoacetyl-CoA reductase compare
SMc02361 -0.8 -3.0 cytochrome C-type biogenesis transmembrane protein compare
SMc01577 -0.8 -1.7 hypothetical protein compare
SMa0905 -0.8 -1.2 hypothetical protein compare
SMc02835 -0.8 -4.1 glucokinase compare
SMc03065 -0.8 -4.5 ABC transporter for D-maltose/D-trehalose/sucrose, ATPase component (AglK) (from data) compare
SMc02149 -0.8 -1.0 hypothetical protein compare
SMc02543 -0.8 -4.3 hypothetical protein compare


Specific Phenotypes

For 5 genes in this experiment

For carbon source palatinose hydrate in Sinorhizobium meliloti 1021

For carbon source palatinose hydrate across organisms