Experiment set14IT035 for Pseudomonas fluorescens SBW25-INTG

Compare to:

Glucose (C) and L-Glutamine (N); with MOPS

200 most important genes:

  gene name fitness t score description  
PFLU_RS28695 -4.6 -8.9 phosphoglycerate dehydrogenase compare
PFLU_RS23065 -4.3 -5.9 phosphate acyltransferase PlsX compare
PFLU_RS28535 -3.7 -16.2 dihydroxy-acid dehydratase compare
PFLU_RS20575 -3.7 -7.4 3-isopropylmalate dehydratase small subunit compare
PFLU_RS20580 -3.7 -11.5 3-isopropylmalate dehydratase large subunit compare
PFLU_RS25640 -3.6 -12.5 ketol-acid reductoisomerase compare
PFLU_RS24765 -3.5 -20.2 2-isopropylmalate synthase compare
PFLU_RS20565 -3.3 -14.3 3-isopropylmalate dehydrogenase compare
PFLU_RS20515 -3.3 -2.3 amidophosphoribosyltransferase compare
PFLU_RS12915 -3.3 -3.9 methyltransferase domain-containing protein compare
PFLU_RS02490 -3.2 -13.9 phosphoserine phosphatase SerB compare
PFLU_RS05965 -3.1 -2.0 hypothetical protein compare
PFLU_RS30900 -3.0 -2.4 hypothetical protein compare
PFLU_RS00175 -3.0 -8.2 tryptophan synthase subunit alpha compare
PFLU_RS23070 -3.0 -1.9 50S ribosomal protein L32 compare
PFLU_RS01995 -2.9 -10.6 malate dehydrogenase compare
PFLU_RS04465 -2.9 -10.2 ATP phosphoribosyltransferase compare
PFLU_RS31530 -2.8 -1.8 transposase compare
PFLU_RS20510 -2.7 -14.0 O-succinylhomoserine sulfhydrylase compare
PFLU_RS09055 -2.7 -1.9 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase compare
PFLU_RS29515 -2.7 -11.5 RidA family protein compare
PFLU_RS13350 -2.6 -2.3 ParD-like family protein compare
PFLU_RS01485 -2.6 -14.9 cellulase compare
PFLU_RS20540 -2.6 -10.9 phosphoribosylanthranilate isomerase compare
PFLU_RS00870 -2.5 -1.9 hypothetical protein compare
PFLU_RS01610 -2.5 -10.2 imidazole glycerol phosphate synthase subunit HisH compare
PFLU_RS28165 -2.5 -12.1 methylenetetrahydrofolate reductase [NAD(P)H] compare
PFLU_RS28390 -2.4 -10.8 methionine biosynthesis protein MetW compare
PFLU_RS01900 -2.4 -7.4 phosphoribosyl-AMP cyclohydrolase compare
PFLU_RS08990 -2.3 -3.5 hypothetical protein compare
PFLU_RS12980 -2.3 -7.4 nitrite/sulfite reductase compare
PFLU_RS28385 -2.2 -11.2 homoserine O-acetyltransferase compare
PFLU_RS27650 -2.1 -8.1 biotin synthase BioB compare
PFLU_RS01605 -2.1 -7.9 imidazoleglycerol-phosphate dehydratase HisB compare
PFLU_RS04470 -2.1 -10.5 histidinol dehydrogenase compare
PFLU_RS28655 -2.1 -11.3 HAD family hydrolase compare
PFLU_RS22105 -2.1 -5.7 cysteine synthase CysM compare
PFLU_RS00180 -2.0 -7.3 tryptophan synthase subunit beta compare
PFLU_RS22740 -2.0 -3.3 phosphoadenylyl-sulfate reductase compare
PFLU_RS27440 -2.0 -5.7 nucleotidyltransferase family protein compare
PFLU_RS01625 -2.0 -2.3 imidazole glycerol phosphate synthase subunit HisF compare
PFLU_RS27370 -1.9 -10.5 anthranilate phosphoribosyltransferase compare
PFLU_RS18505 -1.9 -7.5 uroporphyrinogen-III C-methyltransferase compare
PFLU_RS07245 -1.9 -7.1 DegQ family serine endoprotease compare
PFLU_RS29580 -1.8 -4.3 ABC transporter ATP-binding protein compare
PFLU_RS31290 -1.8 -1.8 EamA family transporter compare
PFLU_RS01895 -1.8 -5.6 phosphoribosyl-ATP diphosphatase compare
PFLU_RS26640 -1.7 -7.5 septal ring lytic transglycosylase RlpA family protein compare
PFLU_RS22030 -1.7 -2.8 cob(I)yrinic acid a,c-diamide adenosyltransferase compare
PFLU_RS08410 -1.7 -7.8 HTH-type transcriptional regulator CysB compare
PFLU_RS05690 -1.7 -1.6 Grx4 family monothiol glutaredoxin compare
PFLU_RS01620 -1.7 -7.2 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase compare
PFLU_RS21990 -1.6 -6.9 alpha-ribazole phosphatase family protein compare
PFLU_RS02365 -1.6 -8.4 glycosyltransferase compare
PFLU_RS19170 -1.6 -3.3 ATP-dependent Clp endopeptidase proteolytic subunit ClpP compare
PFLU_RS13540 -1.6 -2.7 3-phosphoshikimate 1-carboxyvinyltransferase compare
PFLU_RS02590 -1.6 -7.5 ATP phosphoribosyltransferase regulatory subunit compare
PFLU_RS22095 -1.6 -11.3 GTP diphosphokinase compare
PFLU_RS27365 -1.6 -7.8 indole-3-glycerol phosphate synthase TrpC compare
PFLU_RS00535 -1.6 -2.5 DUF1127 domain-containing protein compare
PFLU_RS02975 -1.5 -6.6 precorrin-3B synthase compare
PFLU_RS12445 -1.4 -9.2 TonB-dependent siderophore receptor compare
PFLU_RS03970 -1.4 -6.4 carboxylating nicotinate-nucleotide diphosphorylase compare
PFLU_RS21985 -1.4 -2.9 adenosylcobinamide-GDP ribazoletransferase compare
PFLU_RS13015 -1.4 -4.7 precorrin-4 C(11)-methyltransferase compare
PFLU_RS22010 -1.4 -5.3 threonine-phosphate decarboxylase compare
PFLU_RS08160 -1.4 -4.5 sugar transferase compare
PFLU_RS25740 -1.4 -3.9 polynucleotide adenylyltransferase PcnB compare
PFLU_RS11980 -1.4 -5.2 precorrin-6A synthase (deacetylating) compare
PFLU_RS07695 -1.4 -3.0 beta-N-acetylhexosaminidase compare
PFLU_RS26505 -1.3 -1.5 DUF2788 domain-containing protein compare
PFLU_RS13040 -1.3 -8.5 cobaltochelatase subunit CobN compare
PFLU_RS28285 -1.3 -2.7 hypothetical protein compare
PFLU_RS28965 -1.3 -6.5 5-formyltetrahydrofolate cyclo-ligase compare
PFLU_RS02990 -1.3 -4.5 precorrin-3B C(17)-methyltransferase compare
PFLU_RS02970 -1.3 -4.8 bifunctional cobalt-precorrin-7 (C(5))-methyltransferase/cobalt-precorrin-6B (C(15))-methyltransferase compare
PFLU_RS01965 -1.3 -1.4 ATP-dependent protease subunit HslV compare
PFLU_RS12975 -1.3 -3.4 DUF934 domain-containing protein compare
PFLU_RS15310 -1.3 -1.8 YgdI/YgdR family lipoprotein compare
PFLU_RS22455 -1.3 -6.0 hypothetical protein compare
PFLU_RS21425 -1.3 -3.5 lipid A biosynthesis lauroyl acyltransferase compare
PFLU_RS13795 -1.3 -2.2 hypothetical protein compare
PFLU_RS31635 -1.3 -2.6 IS21 family transposase compare
PFLU_RS28195 -1.2 -6.6 adenosylmethionine--8-amino-7-oxononanoate transaminase compare
PFLU_RS08185 -1.2 -5.7 DegT/DnrJ/EryC1/StrS aminotransferase family protein compare
PFLU_RS05540 -1.2 -8.6 LysR family transcriptional regulator compare
PFLU_RS18530 -1.2 -2.4 DNA translocase FtsK compare
PFLU_RS01955 -1.2 -5.0 DUF971 domain-containing protein compare
PFLU_RS19165 -1.2 -3.1 ATP-dependent Clp protease ATP-binding subunit ClpX compare
PFLU_RS27630 -1.2 -2.8 dethiobiotin synthase compare
PFLU_RS02965 -1.2 -6.6 cobalt-precorrin-6A reductase compare
PFLU_RS02565 -1.2 -2.7 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA compare
PFLU_RS19550 -1.2 -0.9 ABC transporter ATP-binding protein compare
PFLU_RS27640 -1.2 -1.2 alpha/beta fold hydrolase compare
PFLU_RS22070 -1.2 -2.4 phosphoribosylglycinamide formyltransferase compare
PFLU_RS13050 -1.1 -4.1 VWA domain-containing protein compare
PFLU_RS03400 -1.1 -2.6 hypothetical protein compare
PFLU_RS22005 -1.1 -6.8 cobyric acid synthase compare
PFLU_RS27305 -1.1 -5.6 anhydro-N-acetylmuramic acid kinase compare
PFLU_RS12800 -1.1 -1.6 amino acid ABC transporter ATP-binding protein compare
PFLU_RS00895 -1.1 -2.5 hypothetical protein compare
PFLU_RS08065 -1.1 -5.2 N-acetylmuramic acid 6-phosphate phosphatase MupP compare
PFLU_RS21360 -1.1 -1.6 MarR family transcriptional regulator compare
PFLU_RS25735 -1.1 -3.6 sigma-54-dependent Fis family transcriptional regulator compare
PFLU_RS31510 -1.1 -1.6 transcriptional regulator compare
PFLU_RS22015 -1.1 -6.2 cobalamin biosynthesis protein compare
PFLU_RS29295 -1.1 -3.3 YjbQ family protein compare
PFLU_RS24050 -1.1 -6.4 tol-pal system protein YbgF compare
PFLU_RS22000 -1.1 -4.9 bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase compare
PFLU_RS16580 -1.1 -2.3 hypothetical protein compare
PFLU_RS03555 -1.1 -1.0 EscS/YscS/HrcS family type III secretion system export apparatus protein compare
PFLU_RS01665 -1.1 -2.2 glutaredoxin 3 compare
PFLU_RS21315 -1.1 -3.2 GTP cyclohydrolase I FolE compare
PFLU_RS25750 -1.1 -2.9 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
PFLU_RS22190 -1.1 -1.2 hypothetical protein compare
PFLU_RS21995 -1.1 -2.5 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase compare
PFLU_RS24090 -1.1 -0.7 Holliday junction branch migration protein RuvA compare
PFLU_RS21290 -1.0 -3.1 hypothetical protein compare
PFLU_RS10405 -1.0 -1.7 helix-turn-helix transcriptional regulator compare
PFLU_RS11845 -1.0 -3.0 DUF4880 domain-containing protein compare
PFLU_RS25800 -1.0 -2.3 tRNA pseudouridine(55) synthase TruB compare
PFLU_RS13010 -1.0 -3.1 Fe-S biogenesis protein NfuA compare
PFLU_RS27375 -1.0 -4.7 aminodeoxychorismate/anthranilate synthase component II compare
PFLU_RS23920 -1.0 -1.9 septation protein A compare
PFLU_RS14300 -1.0 -1.6 response regulator transcription factor compare
PFLU_RS28020 -1.0 -3.4 ATP-dependent RNA helicase DbpA compare
PFLU_RS01315 -1.0 -1.9 Hsp33 family molecular chaperone HslO compare
PFLU_RS13000 -1.0 -6.8 methionine synthase compare
PFLU_RS24025 -1.0 -5.6 quinolinate synthase NadA compare
PFLU_RS13045 -1.0 -3.3 AAA domain-containing protein compare
PFLU_RS23305 -1.0 -5.6 arginine N-succinyltransferase compare
PFLU_RS17265 -1.0 -1.7 hypothetical protein compare
PFLU_RS29490 -1.0 -5.2 ribonuclease PH compare
PFLU_RS22025 -1.0 -7.0 cobyrinate a,c-diamide synthase compare
PFLU_RS19160 -1.0 -5.0 endopeptidase La compare
PFLU_RS27420 -1.0 -2.3 response regulator transcription factor compare
PFLU_RS02670 -1.0 -2.3 hypothetical protein compare
PFLU_RS17545 -1.0 -1.2 DUF465 domain-containing protein compare
PFLU_RS23310 -1.0 -5.4 arginine/ornithine succinyltransferase subunit alpha compare
PFLU_RS26635 -1.0 -3.8 D-alanyl-D-alanine carboxypeptidase compare
PFLU_RS05890 -1.0 -1.1 recombination regulator RecX compare
PFLU_RS03765 -1.0 -5.9 sulfate adenylyltransferase subunit CysD compare
PFLU_RS13035 -1.0 -1.9 cobalamin biosynthesis protein CobW compare
PFLU_RS24475 -1.0 -8.2 AmpG family muropeptide MFS transporter compare
PFLU_RS25120 -1.0 -2.0 response regulator compare
PFLU_RS21215 -1.0 -1.3 YheU family protein compare
PFLU_RS16565 -1.0 -2.7 hypothetical protein compare
PFLU_RS27645 -1.0 -5.2 8-amino-7-oxononanoate synthase compare
PFLU_RS25645 -0.9 -1.9 acetolactate synthase small subunit compare
PFLU_RS01615 -0.9 -3.5 DUF2164 domain-containing protein compare
PFLU_RS21240 -0.9 -1.5 hypothetical protein compare
PFLU_RS15610 -0.9 -2.9 helix-turn-helix transcriptional regulator compare
PFLU_RS02985 -0.9 -6.0 precorrin-2 C(20)-methyltransferase compare
PFLU_RS17920 -0.9 -1.5 acyltransferase compare
PFLU_RS18015 -0.9 -1.8 energy transducer TonB compare
PFLU_RS21580 -0.9 -1.3 MOSC domain-containing protein compare
PFLU_RS15970 -0.9 -1.9 DUF861 domain-containing protein compare
PFLU_RS07665 -0.9 -1.6 type I DNA topoisomerase compare
PFLU_RS31805 -0.9 -1.7 hypothetical protein compare
PFLU_RS30590 -0.9 -1.0 hypothetical protein compare
PFLU_RS29310 -0.9 -1.0 accessory factor UbiK family protein compare
PFLU_RS09980 -0.9 -6.7 peptidase S41 compare
PFLU_RS08765 -0.9 -2.0 phosphonate C-P lyase system protein PhnH compare
PFLU_RS15990 -0.9 -1.5 SDR family oxidoreductase compare
PFLU_RS18725 -0.9 -1.0 alpha/beta hydrolase compare
PFLU_RS11055 -0.9 -2.1 hypothetical protein compare
PFLU_RS29755 -0.9 -5.4 phosphate ABC transporter ATP-binding protein compare
PFLU_RS29900 -0.9 -5.1 DNA helicase II compare
PFLU_RS17580 -0.9 -1.5 repressor LexA compare
PFLU_RS04445 -0.9 -3.2 ABC transporter substrate-binding protein compare
PFLU_RS03770 -0.9 -5.9 sulfate adenylyltransferase subunit CysN compare
PFLU_RS28325 -0.8 -3.8 energy transducer TonB compare
PFLU_RS28080 -0.8 -1.9 hypothetical protein compare
PFLU_RS00245 -0.8 -3.6 YheV family putative metal-binding protein compare
PFLU_RS20970 -0.8 -1.1 phytanoyl-CoA dioxygenase family protein compare
PFLU_RS27380 -0.8 -5.8 anthranilate synthase component I compare
PFLU_RS13205 -0.8 -1.9 DUF883 family protein compare
PFLU_RS27445 -0.8 -6.1 phosphotransferase compare
PFLU_RS31835 -0.8 -1.9 hypothetical protein compare
PFLU_RS05585 -0.8 -2.6 MtnX-like HAD-IB family phosphatase compare
PFLU_RS02865 -0.8 -2.3 GNAT family N-acetyltransferase compare
PFLU_RS13895 -0.8 -1.1 helix-turn-helix transcriptional regulator compare
PFLU_RS24330 -0.8 -2.8 phosphogluconate dehydratase compare
PFLU_RS19420 -0.8 -3.2 sigma-70 family RNA polymerase sigma factor compare
PFLU_RS07650 -0.8 -5.4 fatty acid oxidation complex subunit alpha FadB compare
PFLU_RS08165 -0.8 -1.1 acyl carrier protein compare
PFLU_RS31100 -0.8 -2.2 preprotein translocase subunit SecG compare
PFLU_RS22195 -0.8 -2.3 DEAD/DEAH box helicase compare
PFLU_RS14355 -0.8 -1.5 DUF2388 domain-containing protein compare
PFLU_RS02765 -0.8 -1.3 HupE/UreJ family protein compare
PFLU_RS31435 -0.8 -2.5 ABC transporter ATP-binding protein compare
PFLU_RS13300 -0.8 -1.9 DNA-directed RNA polymerase sigma-70 factor compare
PFLU_RS05595 -0.8 -3.3 alpha/beta fold hydrolase compare
PFLU_RS04715 -0.8 -2.6 D-alanine--D-alanine ligase compare
PFLU_RS04415 -0.8 -1.9 LPS export ABC transporter periplasmic protein LptC compare
PFLU_RS00070 -0.8 -1.2 tetratricopeptide repeat protein compare
PFLU_RS19665 -0.8 -1.2 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit compare
PFLU_RS18615 -0.8 -1.1 NADH-quinone oxidoreductase subunit A compare
PFLU_RS18395 -0.8 -0.9 MotA/TolQ/ExbB proton channel family protein compare
PFLU_RS14210 -0.8 -1.4 TetR/AcrR family transcriptional regulator compare


Specific Phenotypes

None in this experiment

For Pseudomonas fluorescens SBW25-INTG in no stress control experiments

For no stress control D-Glucose across organisms