Experiment set14IT034 for Sinorhizobium meliloti 1021

Compare to:

Mannobiose carbon source

200 most important genes:

  gene name fitness t score description  
SMc00236 -8.5 -5.9 Indole-3-glycerol phosphate synthase compare
SMc02899 -7.7 -10.6 prephenate dehydratase compare
SMc00640 -7.6 -7.4 phosphoserine aminotransferase compare
SMc02766 -7.6 -16.2 tryptophan synthase subunit beta compare
SMc01726 -7.4 -5.1 acetylglutamate kinase compare
SMc03797 -7.3 -11.1 homoserine O-succinyltransferase compare
SMc00993 -7.2 -7.0 phosphoribosylamine--glycine ligase compare
SMc01431 -7.2 -7.0 acetolactate synthase 3 catalytic subunit compare
SMc01843 -7.2 -10.9 5,10-methylenetetrahydrofolate reductase compare
SMc02767 -7.1 -9.8 N-(5'-phosphoribosyl)anthranilate isomerase compare
SMc02717 -7.1 -8.5 2-isopropylmalate synthase compare
SMc04045 -7.1 -6.9 dihydroxy-acid dehydratase compare
SMc00235 -6.9 -9.5 anthranilate phosphoribosyltransferase compare
SMc02725 -6.8 -10.4 anthranilate synthase compare
SMc00614 -6.8 -6.6 phosphoribosylglycinamide formyltransferase compare
SM_b21174 -6.8 -4.7 phosphate uptake ABC transporter permease compare
SMc01494 -6.6 -12.7 phosphoserine phosphatase compare
SMc04028 -6.6 -18.1 glutamate synthase compare
SMc04405 -6.6 -11.0 3-isopropylmalate dehydrogenase compare
SMc03895 -6.5 -16.4 pyruvate carboxylase compare
SMc03111 -6.4 -8.8 mannose 6-phosphate isomerase (EC 5.3.1.8) (from data) compare
SMc02245 -6.4 -6.2 dihydroorotate dehydrogenase 2 compare
SMc00917 -6.4 -6.2 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) compare
SMc00488 -6.3 -17.7 phosphoribosylformylglycinamidine synthase II compare
SMc00615 -6.2 -10.3 phosphoribosylaminoimidazole synthetase compare
SMa1635 -6.2 -2.5 hypothetical protein compare
SMc04026 -6.2 -9.7 glutamate synthase compare
SM_b21176 -6.0 -4.2 phosphate uptake ABC transporter substrate-binding protein precursor compare
SMc00711 -6.0 -5.4 cyclohexadienyl dehydrogenase compare
SMc02765 -6.0 -11.5 tryptophan synthase subunit alpha compare
SMc01361 -6.0 -4.1 dihydroorotase compare
SMc00493 -5.9 -7.1 phosphoribosylformylglycinamidine synthase I compare
SMc00131 -5.9 -15.3 transcriptional regulator compare
SMc04002 -5.9 -8.4 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
SMc00092 -5.9 -14.3 phosphoadenosine phosphosulfate reductase compare
SMc00918 -5.8 -11.2 ATP phosphoribosyltransferase regulatory subunit compare
SMc02572 -5.8 -4.5 imidazole glycerol phosphate synthase subunit HisH compare
SMc01801 -5.8 -4.0 N-acetylglutamylphosphate reductase (EC 1.2.1.38) (from data) compare
SMc02123 -5.7 -4.6 required for sulfate utilization, putative electron transport protein for sulfite reductase (from data) compare
SMc02217 -5.7 -7.9 O-succinylhomoserine sulfhydrylase compare
SMc01054 -5.6 -6.1 required for sulfate utilization, putative electron source for sulfite reductase CysI (from data) compare
SMc00554 -5.6 -7.7 amidophosphoribosyltransferase compare
SMc03823 -5.6 -10.6 isopropylmalate isomerase large subunit compare
SMc03777 -5.5 -9.2 gamma-glutamyl phosphate reductase compare
SMc03763 -5.4 -3.7 cytosine-specific methyltransferase compare
SMc00495 -5.4 -5.5 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
SMc00293 -5.4 -13.1 homoserine dehydrogenase compare
SMc00412 -5.4 -3.7 orotidine 5'-phosphate decarboxylase compare
SMc02124 -5.4 -16.2 nitrite reductase compare
SMc03112 -5.3 -17.4 B12-dependent methionine synthase compare
SMc02569 -5.3 -5.4 imidazole glycerol phosphate synthase subunit HisF compare
SMc03109 -5.3 -12.3 Mannokinase (EC 2.7.1.7) (from data) compare
SMc02165 -5.3 -5.1 orotate phosphoribosyltransferase compare
SMc01004 -5.2 -7.7 phosphoribosyl-AMP cyclohydrolase compare
SMc02307 -5.1 -7.8 histidinol dehydrogenase compare
SMc02755 -5.1 -7.0 S-adenosyl-L-homocysteine hydrolase compare
SMc00090 -5.1 -11.7 sulfate adenylyltransferase compare
SMc04088 -5.0 -8.6 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
SMc04001 -5.0 -2.0 phosphoribosylaminoimidazole carboxylase catalytic subunit protein compare
SMc01360 -5.0 -4.8 aspartate carbamoyltransferase catalytic subunit compare
SMc02574 -4.9 -7.3 imidazoleglycerol-phosphate dehydratase compare
SMc03229 -4.9 -3.3 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase compare
SMc02137 -4.9 -4.7 ornithine carbamoyltransferase compare
SMc00494 -4.8 -2.8 phosphoribosylformylglycinamidine synthase subunit PurS compare
SMc02166 -4.8 -11.1 dihydroorotase compare
SMc00876 -4.7 -7.9 ATP-binding MRP protein compare
SMc04255 -4.7 -18.2 beta-mannosidase conserved
SMc03070 -4.7 -10.0 glucose-6-phosphate 1-dehydrogenase compare
SMc03776 -4.7 -4.5 gamma-glutamyl kinase compare
SMc02570 -4.6 -4.4 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
SMc04259 -4.6 -7.0 ABC transporter for D-Cellobiose and D-Salicin, periplasmic substrate-binding protein (from data) conserved
SM_b21177 -4.6 -7.0 phosphate uptake ABC transporter ATP-binding protein compare
SMc02138 -4.5 -10.1 acetylornithine transaminase compare
SMc03981 -4.5 -5.9 phosphoglycerate kinase compare
SMc00091 -4.4 -13.2 sulfate adenylyltransferase compare
SM_b21175 -4.3 -5.4 phosphate uptake ABC transporter permease compare
SMc03795 -4.2 -2.4 isopropylmalate isomerase small subunit compare
SMc03826 -4.1 -2.8 argininosuccinate synthase compare
SMc01053 -4.1 -6.2 siroheme synthase compare
SMc02246 -4.0 -1.6 hypothetical protein compare
SMc01430 -3.9 -6.4 acetolactate synthase 3 regulatory subunit compare
SMc01770 -3.9 -1.7 serine hydroxymethyltransferase compare
SMc04346 -3.9 -4.4 ketol-acid reductoisomerase compare
SMc04257 -3.8 -14.4 ABC transporter for D-Cellobiose and D-Salicin, permease component 1 (from data) conserved
SMc00017 -3.8 -2.0 homoserine kinase compare
SMc03979 -3.7 -4.2 glyceraldehyde-3-phosphate dehydrogenase compare
SMc04256 -3.7 -14.3 ABC transporter for D-Cellobiose and D-Salicin, ATPase component (from data) conserved
SMc00294 -3.6 -10.8 aminotransferase compare
SMc02707 -3.6 -6.0 hypothetical protein compare
SMc00815 -3.5 -2.6 inosine 5'-monophosphate dehydrogenase compare
SMc01880 -3.5 -4.1 pantoate--beta-alanine ligase compare
SMc01215 -3.4 -2.3 carbamoyl phosphate synthase large subunit compare
SMc02425 -3.4 -5.7 transcriptional regulator compare
SMc03978 -3.3 -3.2 transketolase compare
SMc04258 -3.3 -12.4 ABC transporter for D-Cellobiose and D-Salicin, permease component 2 (from data) conserved
SMc01881 -3.3 -5.0 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
SMa0882 -3.0 -1.3 hypothetical protein compare
SMc00641 -3.0 -3.9 D-3-phosphoglycerate dehydrogenase compare
SMc01569 -3.0 -1.7 carbamoyl phosphate synthase small subunit compare
SMc00619 -2.9 -3.4 hypothetical protein compare
SMc01578 -2.8 -12.8 aspartate aminotransferase compare
SMc03849 -2.8 -2.4 heme exporter C (cytochrome C-type biogenesis protein) transmembrane compare
SMc03068 -2.6 -11.9 phosphogluconate dehydratase compare
SMc01206 -2.6 -2.6 queuine tRNA-ribosyltransferase compare
SMc01124 -2.5 -8.4 PII uridylyl-transferase compare
SMc01441 -2.4 -5.5 membrane bound protease compare
SMc01028 -2.4 -11.6 phosphopyruvate hydratase compare
SMc02983 -2.4 -7.6 ornithine, DAP, or arginine decarboxylase compare
SMc04005 -2.3 -7.7 pyruvate kinase compare
SMc02833 -2.2 -3.1 penicillin-insensitive murein endopeptidase compare
SMc03110 -2.1 -7.1 hypothetical protein compare
SMc02141 -2.1 -4.9 phosphate transporter PhoU compare
SMc02838 -2.0 -4.8 phosphoglyceromutase compare
SMc01440 -2.0 -7.2 hydrolase serine protease transmembrane protein compare
SMc02147 -1.9 -9.2 phosphate regulon sensor histidine kinase transmembrane protein compare
SMc00012 -1.9 -2.1 cytochrome C oxidase assembly protein compare
SMc00405 -1.8 -9.4 hypothetical protein compare
SMc04245 -1.8 -9.6 high-affinity zinc uptake system ABC transporter protein compare
SMc02434 -1.8 -2.9 hypothetical protein compare
SMc02978 -1.7 -5.4 hypothetical protein compare
SMc03069 -1.7 -2.8 6-phosphogluconolactonase compare
SMa0789 -1.6 -4.0 GntR family transcriptional regulator compare
SMc00334 -1.6 -2.2 cytidylate kinase compare
SMc00010 -1.6 -3.1 cytochrome C oxidase polypeptide I transmembrane protein compare
SMc00450 -1.5 -2.1 protoheme IX farnesyltransferase compare
SMc02140 -1.5 -2.4 phosphate regulon transcriptional regulatory protein compare
SMc04348 -1.4 -1.6 transcriptional regulator compare
SMc02495 -1.4 -2.0 translaldolase compare
SMc02683 -1.4 -1.9 hypothetical protein compare
SMc00963 -1.4 -3.5 hypothetical protein compare
SMc00073 -1.4 -2.6 hypothetical protein compare
SMc00492 -1.4 -1.0 hypothetical protein compare
SMc00451 -1.3 -5.9 processing protease compare
SMc00882 -1.3 -3.5 2-dehydro-3-deoxy-6-phosphogalactonate aldolase compare
SMc00928 -1.2 -1.6 signal peptide protein compare
SM_b21096 -1.2 -1.4 amino acid transporter ABC transporter ATP-binding protein compare
SM_b20758 -1.2 -2.0 ArsR family transcriptional regulator compare
SM_b21373 -1.2 -4.2 D-tagatose 6-phosphate 4-epimerase [EC:5.1.3.40] (from data) compare
SMc03060 -1.2 -7.3 transcriptional regulator compare
SMc01622 -1.2 -3.2 oxidoreductase compare
SMc00302 -1.2 -3.7 hypothetical protein compare
SMc01207 -1.2 -2.4 S-adenosylmethionine--tRNA ribosyltransferase-isomerase compare
SMc00712 -1.2 -2.3 hypothetical protein compare
SMc01613 -1.2 -4.5 ribose-5-phosphate isomerase B compare
SMc00013 -1.2 -1.4 cytochrome C oxidase subunit III transmembrane protein compare
SMc02812 -1.1 -3.5 hypothetical protein compare
SMc00511 -1.1 -4.3 D-ribulose-5-phosphate 3-epimerase compare
SMc01043 -1.1 -6.4 nitrogen assimilation regulatory protein compare
SMc02142 -1.1 -3.7 phosphate transporter ATP-binding protein compare
SMc04085 -1.1 -2.9 hypothetical protein compare
SMc02979 -1.1 -5.8 hypothetical protein compare
SMc03980 -1.0 -3.5 hypothetical protein compare
SMc03153 -1.0 -2.8 keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase compare
SMc02144 -1.0 -3.5 phosphate ABC transporter permease compare
SMc01183 -1.0 -1.5 LexA repressor compare
SMc03066 -1.0 -1.3 hypothetical protein compare
SMc01041 -1.0 -2.6 NIFR3-like protein compare
SM_b20994 -0.9 -3.2 hypothetical protein compare
SMc01368 -0.9 -3.6 transport transmembrane protein compare
SMc01522 -0.9 -1.8 hypothetical protein compare
SMc00982 -0.9 -4.6 dioxygenase compare
SM_b20258 -0.9 -1.9 transcriptional regulator compare
SMc00859 -0.9 -1.9 hypothetical protein compare
SMc02677 -0.9 -3.8 pyrroline-5-carboxylate reductase compare
SMc01097 -0.9 -3.5 hypothetical protein compare
SMa0211 -0.9 -0.9 hypothetical protein compare
SMc02050 -0.9 -3.6 trigger factor compare
SMc02169 -0.9 -1.7 ABC transporter ATP-binding protein compare
SMc00513 -0.9 -3.9 amino acid-binding periplasmic protein compare
SMc02143 -0.9 -2.7 phosphate ABC transporter permease compare
SM_b21347 -0.8 -1.4 pectin degradation protein compare
SMc04243 -0.8 -4.9 high-affinity zinc uptake system membrane ABC transporter protein compare
SMc04213 -0.8 -0.9 diacylglycerol kinase compare
SM_b21691 -0.8 -4.8 nitrilotriacetate monooxygenase subunit A compare
SMc00914 -0.8 -2.5 oxidoreductase compare
SMc00189 -0.8 -1.9 cytochrome C1 protein compare
SMa0503 -0.8 -2.2 ABC transporter permease compare
SMc00188 -0.8 -4.2 cytochrome B transmembrane protein compare
SMc01280 -0.8 -1.7 protease compare
SMc04000 -0.8 -0.6 hypothetical protein compare
SMc01850 -0.8 -1.9 hypothetical protein compare
SMc02102 -0.8 -2.6 hypothetical protein compare
SMc01852 -0.8 -4.3 pyrophosphate--fructose-6-phosphate 1-phosphotransferase compare
SMc00009 -0.8 -3.4 cytochrome C oxidase subunit II protein compare
SMa2349 -0.8 -2.8 xanthine dehydrogenase iron-sulfur-binding subunit compare
SMc04298 -0.8 -2.4 hypothetical protein compare
SM_b20086 -0.8 -1.3 hypothetical protein compare
SMc03973 -0.8 -4.9 hypothetical protein compare
SM_b22005 -0.8 -1.3 hypothetical protein compare
SMc02980 -0.8 -1.3 hypothetical protein compare
SMa0360 -0.8 -1.2 transposase compare
SMc01768 -0.8 -3.4 transcriptional regulator compare
SMa2020 -0.8 -2.4 Transcriptional regulator compare
SMc02640 -0.8 -1.9 UDP-glucuronic acid epimerase compare
SMc02172 -0.8 -3.9 transcriptional regulator compare
SMa2168 -0.7 -1.5 tRNA-Met compare
SMc00579 -0.7 -2.5 dimethyladenosine transferase compare
SMc01337 -0.7 -0.6 hypothetical protein compare
SM_b20553 -0.7 -2.2 hypothetical protein compare
SMc00414 -0.7 -5.6 hypothetical protein compare


Specific Phenotypes

For 7 genes in this experiment

For carbon source Mannobiose in Sinorhizobium meliloti 1021

For carbon source Mannobiose across organisms