Experiment set14IT034 for Klebsiella michiganensis M5al

Compare to:

RCH2_defined_noCarbon with Mixed culture; Arthrobacter sp. AnTP99 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x

200 most important genes:

  gene name fitness t score description  
BWI76_RS18920 -5.6 -3.7 ATP phosphoribosyltransferase compare
BWI76_RS27385 -5.6 -6.6 orotate phosphoribosyltransferase compare
BWI76_RS18935 -5.5 -8.7 bifunctional imidazole glycerol-phosphate dehydratase/histidinol phosphatase compare
BWI76_RS00855 -5.4 -9.8 argininosuccinate lyase compare
BWI76_RS04250 -5.3 -8.0 homoserine kinase compare
BWI76_RS20355 -5.3 -3.2 colicin V production protein compare
BWI76_RS18940 -5.2 -3.9 imidazole glycerol phosphate synthase subunit HisH compare
BWI76_RS04675 -5.1 -6.4 3-isopropylmalate dehydrogenase compare
BWI76_RS23365 -5.1 -4.5 LysR family transcriptional regulator compare
BWI76_RS00850 -5.0 -10.7 acetylglutamate kinase compare
BWI76_RS07070 -5.0 -4.8 5-(carboxyamino)imidazole ribonucleotide mutase compare
BWI76_RS18925 -4.9 -8.4 histidinol dehydrogenase compare
BWI76_RS04255 -4.9 -9.4 threonine synthase compare
BWI76_RS02995 -4.8 -7.4 aspartate carbamoyltransferase compare
BWI76_RS00845 -4.8 -11.1 N-acetyl-gamma-glutamyl-phosphate reductase compare
BWI76_RS11850 -4.8 -11.9 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase compare
BWI76_RS00990 -4.7 -7.6 ketol-acid reductoisomerase compare
BWI76_RS27390 -4.7 -7.7 ribonuclease PH compare
BWI76_RS04470 -4.6 -8.9 carbamoyl phosphate synthase large subunit compare
BWI76_RS22755 -4.6 -3.2 phosphoadenosine phosphosulfate reductase compare
BWI76_RS18930 -4.6 -5.1 histidinol-phosphate transaminase compare
BWI76_RS11840 -4.6 -5.9 tryptophan synthase subunit alpha compare
BWI76_RS26455 -4.6 -2.2 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase compare
BWI76_RS01615 -4.5 -10.5 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase compare
BWI76_RS04670 -4.5 -10.0 3-isopropylmalate dehydratase large subunit compare
BWI76_RS11965 -4.5 -5.4 orotidine-5'-phosphate decarboxylase compare
BWI76_RS20895 -4.4 -5.2 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
BWI76_RS17975 -4.4 -4.0 tail-specific protease compare
BWI76_RS04665 -4.4 -18.3 3-isopropylmalate dehydratase small subunit compare
BWI76_RS23220 -4.4 -8.2 amino-acid N-acetyltransferase compare
BWI76_RS24285 -4.4 -8.1 cystathionine beta-lyase compare
BWI76_RS04245 -4.3 -14.2 bifunctional aspartate kinase/homoserine dehydrogenase I compare
BWI76_RS25115 -4.3 -7.6 argininosuccinate synthase compare
BWI76_RS00785 -4.3 -5.1 cystathionine gamma-synthase compare
BWI76_RS08520 -4.3 -2.4 colicin transporter TolQ compare
BWI76_RS00980 -4.2 -11.2 PLP-dependent threonine dehydratase compare
BWI76_RS01655 -4.2 -8.1 homoserine O-succinyltransferase compare
BWI76_RS21265 -4.2 -13.4 phosphoribosylformylglycinamidine synthase compare
BWI76_RS00805 -4.2 -3.3 5,10-methylenetetrahydrofolate reductase compare
BWI76_RS07065 -4.2 -8.9 5-(carboxyamino)imidazole ribonucleotide synthase compare
BWI76_RS18950 -4.1 -3.0 imidazole glycerol phosphate synthase cyclase subunit compare
BWI76_RS09760 -4.1 -2.8 3-phosphoshikimate 1-carboxyvinyltransferase compare
BWI76_RS05840 -4.0 -2.8 glutamate 5-kinase compare
BWI76_RS22765 -4.0 -9.0 sulfite reductase subunit alpha compare
BWI76_RS26390 -4.0 -10.2 cell division protein FtsX compare
BWI76_RS08385 -4.0 -4.0 citrate (Si)-synthase compare
BWI76_RS18955 -3.9 -4.6 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase compare
BWI76_RS01610 -3.9 -7.8 phosphoribosylamine--glycine ligase compare
BWI76_RS26000 -3.9 -8.2 aspartate aminotransferase family protein compare
BWI76_RS20350 -3.8 -7.6 amidophosphoribosyltransferase compare
BWI76_RS21465 -3.8 -6.9 bifunctional chorismate mutase/prephenate dehydratase compare
BWI76_RS04685 -3.8 -9.1 putative leucine operon leader peptide compare
BWI76_RS21475 -3.8 -2.6 bifunctional chorismate mutase/prephenate dehydrogenase compare
BWI76_RS00975 -3.8 -10.9 dihydroxy-acid dehydratase compare
BWI76_RS00835 -3.7 -13.4 phosphoenolpyruvate carboxylase compare
BWI76_RS10990 -3.7 -3.5 dihydroorotase compare
BWI76_RS11845 -3.7 -1.7 tryptophan synthase subunit beta compare
BWI76_RS03010 -3.6 -7.1 ornithine carbamoyltransferase compare
BWI76_RS26460 -3.6 -4.3 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
BWI76_RS26395 -3.6 -7.9 cell division protein FtsE compare
BWI76_RS25645 -3.6 -5.4 shikimate dehydrogenase compare
BWI76_RS20965 -3.6 -5.3 phosphoribosylformylglycinamidine cyclo-ligase compare
BWI76_RS08530 -3.5 -1.7 protein TolA compare
BWI76_RS25920 -3.5 -2.0 peptidylprolyl isomerase compare
BWI76_RS00985 -3.5 -7.9 transcriptional regulator IlvY compare
BWI76_RS04680 -3.5 -10.6 2-isopropylmalate synthase compare
BWI76_RS21235 -3.5 -1.2 hypothetical protein compare
BWI76_RS09910 -3.4 -14.9 dihydroorotate dehydrogenase (quinone) compare
BWI76_RS22690 -3.4 -3.1 adenylyl-sulfate kinase compare
BWI76_RS11860 -3.3 -8.8 anthranilate synthase component I compare
BWI76_RS16965 -3.3 -2.3 murein lipoprotein compare
BWI76_RS05835 -3.3 -2.2 gamma-glutamyl-phosphate reductase compare
BWI76_RS20360 -3.3 -1.1 cell division protein DedD compare
BWI76_RS04160 -3.3 -3.1 phosphoserine phosphatase compare
BWI76_RS04270 -3.2 -4.0 transaldolase compare
BWI76_RS23920 -3.2 -2.2 D-3-phosphoglycerate dehydrogenase compare
BWI76_RS17980 -3.2 -4.5 RNA chaperone ProQ compare
BWI76_RS08525 -3.2 -1.6 colicin transporter compare
BWI76_RS09655 -3.1 -5.9 leucine-responsive regulatory protein compare
BWI76_RS22760 -3.1 -8.1 sulfite reductase subunit beta compare
BWI76_RS09755 -3.1 -2.1 phosphoserine transaminase compare
BWI76_RS04240 -3.1 -1.9 thr operon leader peptide compare
BWI76_RS26665 -3.0 -3.8 DNA-binding response regulator compare
BWI76_RS00965 -2.9 -1.0 acetolactate synthase 2 small subunit compare
BWI76_RS11855 -2.8 -7.9 bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase compare
BWI76_RS24605 -2.8 -4.3 dihydroxyacetone kinase subunit DhaM compare
BWI76_RS08535 -2.8 -1.6 translocation protein TolB compare
BWI76_RS08210 -2.8 -1.3 N-acetylglucosamine-6-phosphate deacetylase compare
BWI76_RS23265 -2.8 -2.5 hypothetical protein compare
BWI76_RS01220 -2.7 -5.1 DNA-dependent helicase II compare
BWI76_RS21580 -2.7 -1.5 SsrA-binding protein compare
BWI76_RS09625 -2.7 -1.3 hypothetical protein compare
BWI76_RS04465 -2.7 -6.1 carbamoyl-phosphate synthase small subunit compare
BWI76_RS26620 -2.7 -0.9 Fe-S biogenesis protein NfuA compare
BWI76_RS09645 -2.7 -0.9 thioredoxin-disulfide reductase compare
BWI76_RS20380 -2.6 -0.8 tRNA pseudouridine(38-40) synthase TruA compare
BWI76_RS06535 -2.6 -2.5 endopeptidase La compare
BWI76_RS25060 -2.6 -5.8 lipoprotein NlpI compare
BWI76_RS01115 -2.6 -2.3 dTDP-4-amino-4,6-dideoxygalactose transaminase compare
BWI76_RS27915 -2.6 -2.3 YceK/YidQ family lipoprotein compare
BWI76_RS25315 -2.6 -10.7 glutamate synthase large subunit compare
BWI76_RS05120 -2.5 -5.8 bifunctional glycosyl transferase/transpeptidase compare
BWI76_RS25335 -2.5 -1.9 stringent starvation protein A compare
BWI76_RS26440 -2.4 -1.4 hypothetical protein compare
BWI76_RS00960 -2.4 -3.8 acetolactate synthase 2 catalytic subunit compare
BWI76_RS07465 -2.4 -1.6 TetR family transcriptional regulator compare
BWI76_RS21370 -2.4 -1.1 ATP-dependent RNA helicase SrmB compare
BWI76_RS08605 -2.4 -2.2 phosphoglyceromutase compare
BWI76_RS04645 -2.4 -3.1 3-dehydroquinase compare
BWI76_RS00385 -2.3 -8.1 nitrogen assimilation regulatory protein compare
BWI76_RS01800 -2.3 -2.7 glucose-6-phosphate isomerase compare
BWI76_RS11205 -2.3 -5.1 transcription-repair coupling factor compare
BWI76_RS17300 -2.3 -0.9 tRNA-Tyr compare
BWI76_RS24740 -2.2 -3.0 GntR family transcriptional regulator compare
BWI76_RS03660 -2.2 -2.6 hypothetical protein compare
BWI76_RS01095 -2.2 -2.3 UDP-N-acetyl-D-mannosamine dehydrogenase compare
BWI76_RS05015 -2.2 -2.0 transcriptional regulator compare
BWI76_RS14065 -2.2 -2.1 hypothetical protein compare
BWI76_RS22805 -2.2 -8.9 GTP diphosphokinase compare
BWI76_RS23360 -2.2 -1.3 diaminopimelate decarboxylase compare
BWI76_RS24580 -2.1 -3.7 PTS-dependent dihydroxyacetone kinase operon transcriptional regulator DhaR compare
BWI76_RS25425 -2.1 -0.9 arginine repressor compare
BWI76_RS19905 -2.1 -3.2 OmpK36 porin compare
BWI76_RS04715 -2.1 -1.9 division/cell wall cluster transcriptional repressor MraZ compare
BWI76_RS10935 -2.0 -4.7 glucan biosynthesis glucosyltransferase H compare
BWI76_RS19840 -2.0 -0.6 hypothetical protein compare
BWI76_RS02530 -2.0 -1.4 tRNA dimethylallyltransferase compare
BWI76_RS25320 -2.0 -7.5 glutamate synthase compare
BWI76_RS08405 -2.0 -2.4 succinate dehydrogenase flavoprotein subunit compare
BWI76_RS10955 -2.0 -1.7 hypothetical protein compare
BWI76_RS01080 -1.9 -7.4 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase compare
BWI76_RS25000 -1.9 -1.3 malonate decarboxylase acyl carrier protein compare
BWI76_RS00345 -1.9 -3.5 protein disulfide oxidoreductase DsbA compare
BWI76_RS17860 -1.9 -1.8 YoaH family protein compare
BWI76_RS09640 -1.9 -2.1 cysteine/glutathione ABC transporter permease/ATP-binding protein CydD compare
BWI76_RS16485 -1.9 -1.5 ribonuclease T compare
BWI76_RS08395 -1.9 -1.8 succinate dehydrogenase cytochrome b556 large subunit compare
BWI76_RS09970 -1.8 -1.1 porin OmpA compare
BWI76_RS01135 -1.8 -5.2 lipopolysaccharide N-acetylmannosaminouronosyltransferase compare
BWI76_RS00180 -1.8 -0.8 F0F1 ATP synthase subunit epsilon compare
BWI76_RS21310 -1.8 -1.3 DNA repair protein RecO compare
BWI76_RS00875 -1.8 -4.0 DNA-binding transcriptional regulator FabR compare
BWI76_RS00390 -1.8 -5.6 two-component system sensor histidine kinase NtrB compare
BWI76_RS26055 -1.8 -5.4 siroheme synthase compare
BWI76_RS20440 -1.8 -2.5 50S ribosomal protein L3 N(5)-glutamine methyltransferase compare
BWI76_RS09670 -1.7 -3.0 recombination factor protein RarA compare
BWI76_RS23480 -1.7 -11.1 EAL domain-containing protein compare
BWI76_RS04525 -1.7 -1.6 4-hydroxythreonine-4-phosphate dehydrogenase PdxA compare
BWI76_RS05915 -1.7 -2.9 helix-turn-helix transcriptional regulator compare
BWI76_RS25870 -1.7 -1.3 elongation factor Tu compare
BWI76_RS15110 -1.7 -2.8 putative excinuclease ABC subunit A compare
BWI76_RS25960 -1.7 -3.4 NUDIX hydrolase compare
BWI76_RS09870 -1.7 -5.2 aromatic amino acid aminotransferase compare
BWI76_RS11300 -1.7 -0.9 cupin compare
BWI76_RS04305 -1.7 -1.1 molecular chaperone DnaJ compare
BWI76_RS27440 -1.7 -1.1 DNA helicase RecG compare
BWI76_RS10930 -1.7 -5.9 glucan biosynthesis protein G compare
BWI76_RS09030 -1.7 -4.2 transpeptidase compare
BWI76_RS15115 -1.6 -1.1 MFS transporter compare
BWI76_RS23490 -1.6 -4.3 fimbrial protein compare
BWI76_RS20150 -1.6 -2.2 NADH:ubiquinone oxidoreductase subunit J compare
BWI76_RS21565 -1.6 -0.9 outer membrane protein assembly factor BamE compare
BWI76_RS01110 -1.6 -2.8 TDP-fucosamine acetyltransferase compare
BWI76_RS21480 -1.6 -5.6 phospho-2-dehydro-3-deoxyheptonate aldolase compare
BWI76_RS17290 -1.6 -4.9 formyltetrahydrofolate deformylase compare
BWI76_RS15825 -1.6 -1.0 hypothetical protein compare
BWI76_RS25070 -1.6 -1.3 hypothetical protein compare
BWI76_RS22700 -1.5 -3.5 sulfate adenylyltransferase subunit 2 compare
BWI76_RS09650 -1.5 -3.5 hypothetical protein compare
BWI76_RS07185 -1.5 -1.0 hypothetical protein compare
BWI76_RS11155 -1.5 -2.5 penicillin-binding protein activator LpoB compare
BWI76_RS16895 -1.5 -1.0 3-(3-hydroxy-phenyl)propionate transporter MhpT compare
BWI76_RS20490 -1.5 -2.3 hypothetical protein compare
BWI76_RS20640 -1.5 -3.2 cysteine synthase A compare
BWI76_RS21450 -1.5 -1.5 23S rRNA pseudouridine(1911/1915/1917) synthase compare
BWI76_RS23830 -1.5 -4.8 hypothetical protein compare
BWI76_RS01870 -1.5 -3.3 diacylglycerol kinase compare
BWI76_RS05450 -1.5 -0.6 ribonuclease HI compare
BWI76_RS15695 -1.5 -4.3 hypothetical protein compare
BWI76_RS10835 -1.4 -1.1 hypothetical protein compare
BWI76_RS19770 -1.4 -1.5 bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase compare
BWI76_RS02775 -1.4 -3.6 outer membrane protein assembly factor compare
BWI76_RS16955 -1.4 -0.9 hypothetical protein compare
BWI76_RS19685 -1.4 -3.1 lysine transporter compare
BWI76_RS24600 -1.4 -1.7 dihydroxyacetone kinase compare
BWI76_RS10305 -1.4 -5.7 transposase compare
BWI76_RS26570 -1.4 -0.9 anion permease compare
BWI76_RS26670 -1.4 -4.8 two-component sensor histidine kinase compare
BWI76_RS04705 -1.4 -3.1 DNA-binding transcriptional regulator FruR compare
BWI76_RS00715 -1.4 -0.9 two-component sensor histidine kinase compare
BWI76_RS12145 -1.4 -1.9 hypothetical protein compare
BWI76_RS13560 -1.4 -0.7 amino acid ABC transporter substrate-binding subunit compare
BWI76_RS09730 -1.4 -0.9 pyruvate formate lyase 1-activating protein compare
BWI76_RS16275 -1.4 -2.7 fumarate hydratase FumA compare
BWI76_RS00755 -1.4 -2.8 ATP-dependent protease subunit HslV compare
BWI76_RS17720 -1.4 -0.4 muramoyltetrapeptide carboxypeptidase compare
BWI76_RS09305 -1.4 -2.3 hypothetical protein compare
BWI76_RS22650 -1.4 -6.3 lipoprotein NlpD compare
BWI76_RS05075 -1.4 -0.7 type II secretion system protein GspG compare
BWI76_RS14320 -1.3 -1.6 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Klebsiella michiganensis M5al in mixed community experiments

For mixed community Mixed culture; Arthrobacter sp. AnTP99 3:1 starting OD to Klebsiella across organisms