Experiment set14IT034 for Klebsiella michiganensis M5al

Compare to:

RCH2_defined_noCarbon with Mixed culture; Arthrobacter sp. AnTP99 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x

200 most detrimental genes:

  gene name fitness t score description  
BWI76_RS16760 +1.6 2.6 lipase compare
BWI76_RS09515 +1.6 1.5 arginine ABC transporter substrate-binding protein compare
BWI76_RS17645 +1.5 1.4 hypothetical protein compare
BWI76_RS25545 +1.4 2.7 hypothetical protein compare
BWI76_RS03045 +1.3 2.4 hypothetical protein compare
BWI76_RS00590 +1.3 1.7 hypothetical protein compare
BWI76_RS20795 +1.2 2.0 ethanolamine catabolic microcompartment shell protein EutN compare
BWI76_RS16920 +1.2 0.9 3-(2,3-dihydroxyphenyl)propionate dioxygenase compare
BWI76_RS15950 +1.1 2.2 dethiobiotin synthase compare
BWI76_RS16015 +1.1 3.9 pheromone autoinducer 2 transporter compare
BWI76_RS27395 +1.1 4.1 hypothetical protein compare
BWI76_RS11675 +1.1 3.0 arginine N-succinyltransferase compare
BWI76_RS15215 +1.1 1.0 N-acetyltransferase compare
BWI76_RS18360 +1.1 2.5 aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase family protein compare
BWI76_RS14775 +1.1 2.0 creatinine amidohydrolase compare
BWI76_RS07780 +1.0 1.4 hypothetical protein compare
BWI76_RS20940 +1.0 2.5 uracil/xanthine transporter compare
BWI76_RS14075 +1.0 1.1 TetR family transcriptional regulator compare
BWI76_RS14805 +1.0 1.7 hypothetical protein compare
BWI76_RS01585 +1.0 4.1 transcriptional regulator compare
BWI76_RS16120 +1.0 2.0 4-carboxymuconolactone decarboxylase compare
BWI76_RS07705 +1.0 2.6 enterochelin esterase compare
BWI76_RS25865 +1.0 1.9 ferredoxin compare
BWI76_RS19480 +0.9 2.4 transcriptional regulator compare
BWI76_RS03870 +0.9 1.6 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase compare
BWI76_RS11950 +0.9 1.8 phosphatidylglycerophosphatase B compare
BWI76_RS11815 +0.9 1.2 hypothetical protein compare
BWI76_RS18770 +0.9 1.0 DNA gyrase inhibitor compare
BWI76_RS18335 +0.9 5.0 DNA-binding response regulator compare
BWI76_RS04210 +0.9 3.5 hypothetical protein compare
BWI76_RS13215 +0.9 1.6 type I glyceraldehyde-3-phosphate dehydrogenase compare
BWI76_RS15975 +0.9 0.8 hypothetical protein compare
BWI76_RS15900 +0.9 2.9 hypothetical protein compare
BWI76_RS24110 +0.9 1.0 YggU family protein compare
BWI76_RS19360 +0.9 1.8 glucose dehydrogenase compare
BWI76_RS17390 +0.9 1.9 DsrE family protein compare
BWI76_RS07460 +0.9 2.5 hypothetical protein compare
BWI76_RS11890 +0.9 3.1 glycosyl hydrolase compare
BWI76_RS07740 +0.9 1.2 Fe2+-enterobactin ABC transporter substrate-binding protein compare
BWI76_RS16140 +0.8 1.6 3-oxoadipate CoA-transferase compare
BWI76_RS23055 +0.8 2.2 cobalamin biosynthesis protein CbiG compare
BWI76_RS15940 +0.8 1.8 DMSO reductase maturation protein DsmD compare
BWI76_RS09960 +0.8 1.7 Lon protease compare
BWI76_RS19375 +0.8 0.8 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase compare
BWI76_RS07920 +0.8 2.2 methionine aminotransferase compare
BWI76_RS05640 +0.8 1.6 GntR family transcriptional regulator compare
BWI76_RS11820 +0.8 1.3 short-chain dehydrogenase/reductase SDR compare
BWI76_RS01815 +0.8 2.0 phosphate-starvation-inducible protein PsiE compare
BWI76_RS07880 +0.8 1.2 PfkB domain-containing protein compare
BWI76_RS26480 +0.8 2.7 undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase compare
BWI76_RS11810 +0.8 0.8 outer membrane protein OmpW compare
BWI76_RS07255 +0.8 2.1 hypothetical protein compare
BWI76_RS21130 +0.8 2.0 Fe-S assembly protein IscX compare
BWI76_RS03225 +0.8 3.9 transcriptional regulator compare
BWI76_RS11790 +0.8 2.0 acyl-CoA thioesterase compare
BWI76_RS04530 +0.8 1.2 peptidylprolyl isomerase SurA compare
BWI76_RS21945 +0.8 2.4 LysR family transcriptional regulator compare
BWI76_RS06015 +0.8 1.4 hypothetical protein compare
BWI76_RS10400 +0.8 2.4 hypothetical protein compare
BWI76_RS16035 +0.8 2.0 biotin-independent malonate decarboxylase subunit beta compare
BWI76_RS15980 +0.8 2.0 lysine transporter LysE compare
BWI76_RS17375 +0.8 1.6 nitrate ABC transporter, permease protein compare
BWI76_RS07645 +0.8 1.6 short-chain dehydrogenase/reductase compare
BWI76_RS12780 +0.8 2.0 hypothetical protein compare
BWI76_RS23895 +0.8 0.7 Xaa-Pro aminopeptidase compare
BWI76_RS16095 +0.8 2.2 thiamine biosynthesis protein ApbE compare
BWI76_RS20915 +0.8 5.3 peroxiredoxin compare
BWI76_RS20960 +0.8 3.6 ROK family protein compare
BWI76_RS26965 +0.8 4.9 hypothetical protein compare
BWI76_RS12575 +0.8 2.0 FAD-dependent oxidoreductase compare
BWI76_RS19310 +0.8 2.2 ABC transporter permease compare
BWI76_RS03595 +0.8 1.6 ethanolamine utilization protein EutM compare
BWI76_RS23250 +0.8 2.2 hypothetical protein compare
BWI76_RS26760 +0.8 2.6 C4-dicarboxylate transport protein DctA (from data) compare
BWI76_RS22960 +0.7 1.7 YgdI/YgdR family lipoprotein compare
BWI76_RS14930 +0.7 1.7 hypothetical protein compare
BWI76_RS13445 +0.7 1.0 alpha/beta hydrolase compare
BWI76_RS19240 +0.7 1.4 ABC transporter substrate-binding protein compare
BWI76_RS12665 +0.7 2.0 hypothetical protein compare
BWI76_RS10570 +0.7 1.6 cysteine ABC transporter substrate-binding protein compare
BWI76_RS17805 +0.7 0.8 membrane protein compare
BWI76_RS23185 +0.7 2.3 propanediol utilization: polyhedral bodies pduT compare
BWI76_RS12985 +0.7 1.3 transcriptional regulator compare
BWI76_RS14835 +0.7 1.4 hypothetical protein compare
BWI76_RS16925 +0.7 4.5 3-(3-hydroxyphenyl)propionate hydroxylase compare
BWI76_RS18300 +0.7 1.9 hypothetical protein compare
BWI76_RS23195 +0.7 2.0 ethanolamine utilization protein EutP compare
BWI76_RS19590 +0.7 2.3 MFS transporter compare
BWI76_RS20800 +0.7 2.0 carboxysome shell protein compare
BWI76_RS19330 +0.7 0.6 HAD family hydrolase compare
BWI76_RS15080 +0.7 5.6 hypothetical protein compare
BWI76_RS25520 +0.7 1.7 sulfoxide reductase heme-binding subunit YedZ compare
BWI76_RS16335 +0.7 1.1 division septum protein Blr compare
BWI76_RS15790 +0.7 2.8 replication protein compare
BWI76_RS25285 +0.7 0.8 HPr family phosphocarrier protein compare
BWI76_RS06075 +0.7 2.1 taurine transporter subunit compare
BWI76_RS13420 +0.7 0.9 ABC transporter permease compare
BWI76_RS17230 +0.7 2.1 peptide ABC transporter permease compare
BWI76_RS15090 +0.7 2.9 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase compare
BWI76_RS14670 +0.7 1.3 hypothetical protein compare
BWI76_RS02655 +0.7 2.0 hypothetical protein compare
BWI76_RS15085 +0.7 3.4 3-deoxy-D-arabinose-heptulosonic-7-phosphate synthase compare
BWI76_RS21390 +0.7 1.7 thiol disulfide reductase thioredoxin compare
BWI76_RS15190 +0.7 2.7 GGDEF domain-containing protein compare
BWI76_RS12825 +0.7 1.8 hypothetical protein compare
BWI76_RS16000 +0.7 1.1 multidrug transporter subunit MdtI compare
BWI76_RS04095 +0.7 1.7 dUMP phosphatase compare
BWI76_RS24655 +0.7 2.9 autoinducer 2 ABC transporter permease LsrC compare
BWI76_RS08755 +0.7 2.5 adenosylmethionine--8-amino-7-oxononanoate transaminase compare
BWI76_RS12875 +0.7 1.6 bifunctional deaminase-reductase compare
BWI76_RS20765 +0.7 3.1 ethanolamine ammonia lyase large subunit compare
BWI76_RS15285 +0.7 2.0 stress protection protein MarC compare
BWI76_RS22210 +0.7 2.5 murein transglycosylase B compare
BWI76_RS21285 +0.7 1.6 HAD family hydrolase compare
BWI76_RS10500 +0.7 1.4 flavoprotein monooxygenase compare
BWI76_RS13805 +0.7 2.7 inorganic diphosphatase compare
BWI76_RS19575 +0.7 2.2 maleylacetoacetate isomerase compare
BWI76_RS08260 +0.7 1.4 LysR family transcriptional regulator compare
BWI76_RS10725 +0.7 1.8 hypothetical protein compare
BWI76_RS23190 +0.7 1.9 propanediol utilization protein PduU compare
BWI76_RS16080 +0.7 2.6 LysR family transcriptional regulator compare
BWI76_RS23050 +0.7 1.4 cobalt-precorrin-3B C(17)-methyltransferase compare
BWI76_RS11645 +0.7 3.2 ABC transporter substrate-binding protein compare
BWI76_RS02705 +0.7 1.5 iron-sulfur cluster repair di-iron protein compare
BWI76_RS16755 +0.6 1.9 acetoin reductase compare
BWI76_RS10585 +0.6 1.8 amino acid ABC transporter ATP-binding protein compare
BWI76_RS16495 +0.6 1.6 endopeptidase compare
BWI76_RS23320 +0.6 1.0 hypothetical protein compare
BWI76_RS00375 +0.6 1.4 hypothetical protein compare
BWI76_RS11735 +0.6 1.5 PTS N,N'-diacetylchitobiose transporter subunit IIA compare
BWI76_RS14780 +0.6 1.9 phosphotriesterase compare
BWI76_RS19490 +0.6 1.1 binding-protein-dependent transport system inner membrane protein compare
BWI76_RS06125 +0.6 2.6 D-alanine--D-alanine ligase A compare
BWI76_RS06080 +0.6 1.6 taurine dioxygenase compare
BWI76_RS22515 +0.6 3.0 acyl dehydratase compare
BWI76_RS23005 +0.6 1.6 bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase compare
BWI76_RS24720 +0.6 1.2 hypothetical protein compare
BWI76_RS16745 +0.6 2.0 alpha-acetolactate decarboxylase compare
BWI76_RS23705 +0.6 2.0 2-deoxy-D-ribonyl-CoA 3-dehydrogenase (from data) compare
BWI76_RS13480 +0.6 0.7 XRE family transcriptional regulator compare
BWI76_RS14825 +0.6 0.8 dienelactone hydrolase family protein compare
BWI76_RS04155 +0.6 1.5 membrane protein compare
BWI76_RS25485 +0.6 1.2 septum formation protein Maf compare
BWI76_RS18595 +0.6 2.2 hypothetical protein compare
BWI76_RS15265 +0.6 2.2 hypothetical protein compare
BWI76_RS09520 +0.6 1.2 arginine ABC transporter ATP-binding protein ArtP compare
BWI76_RS23560 +0.6 1.8 hypothetical protein compare
BWI76_RS11255 +0.6 0.9 putrescine/spermidine ABC transporter ATP-binding protein compare
BWI76_RS14875 +0.6 2.9 ribokinase-like domain-containing protein compare
BWI76_RS12940 +0.6 1.7 AraC family transcriptional regulator compare
BWI76_RS16645 +0.6 1.5 DeoR family transcriptional regulator compare
BWI76_RS02255 +0.6 2.2 chaperone-modulator protein CbpM compare
BWI76_RS11880 +0.6 2.1 23S rRNA pseudouridylate synthase B compare
BWI76_RS07545 +0.6 3.1 amidase compare
BWI76_RS16655 +0.6 1.9 CatA-like O-acetyltransferase compare
BWI76_RS21275 +0.6 3.5 lytic transglycosylase F compare
BWI76_RS08450 +0.6 1.7 fumarate hydratase compare
BWI76_RS22205 +0.6 1.2 cation ABC transporter ATP-binding protein compare
BWI76_RS13955 +0.6 1.3 hypothetical protein compare
BWI76_RS22000 +0.6 2.0 hypothetical protein compare
BWI76_RS15200 +0.6 2.1 glutaminase compare
BWI76_RS20220 +0.6 3.4 sugar phosphatase compare
BWI76_RS24925 +0.6 2.0 DnaA initiator-associating protein DiaA compare
BWI76_RS07620 +0.6 1.5 transcriptional regulator BetI compare
BWI76_RS19985 +0.6 1.8 MFS transporter compare
BWI76_RS14050 +0.6 1.1 AP endonuclease, family 2 compare
BWI76_RS23880 +0.6 1.7 Aminomethyltransferase (EC 2.1.2.10) (from data) compare
BWI76_RS11700 +0.6 1.0 hypothetical protein compare
BWI76_RS13685 +0.6 1.3 IclR family transcriptional regulator compare
BWI76_RS24260 +0.6 1.7 hypothetical protein compare
BWI76_RS26260 +0.6 1.3 hypothetical protein compare
BWI76_RS12630 +0.6 1.8 regulatory protein, LysR:LysR, substrate-binding protein compare
BWI76_RS24255 +0.6 2.2 thiol:disulfide oxidoreductase compare
BWI76_RS17200 +0.6 1.4 hypothetical protein compare
BWI76_RS02725 +0.6 0.6 HxlR family transcriptional regulator compare
BWI76_RS12620 +0.6 2.3 2-nitropropane dioxygenase compare
BWI76_RS23465 +0.6 2.8 oxidoreductase compare
BWI76_RS04895 +0.6 1.1 hypothetical protein compare
BWI76_RS00740 +0.6 2.1 ribonuclease E activity regulator RraA compare
BWI76_RS03605 +0.6 1.9 BMC domain-containing protein compare
BWI76_RS26285 +0.6 2.3 glycerophosphodiester phosphodiesterase compare
BWI76_RS00825 +0.6 3.4 AraC family transcriptional regulator compare
BWI76_RS10560 +0.6 1.6 gamma-glutamyltransferase compare
BWI76_RS11710 +0.6 2.8 nucleotide excision repair endonuclease compare
BWI76_RS07985 +0.5 0.6 fluoride ion transporter CrcB compare
BWI76_RS16670 +0.5 1.5 NLPA lipoprotein compare
BWI76_RS26405 +0.5 0.6 16S rRNA (guanine(966)-N(2))-methyltransferase compare
BWI76_RS19935 +0.5 0.9 hypothetical protein compare
BWI76_RS24970 +0.5 3.5 peptidase U32 compare
BWI76_RS15035 +0.5 1.0 metal ABC transporter permease compare
BWI76_RS11125 +0.5 1.0 metal-dependent hydrolase compare
BWI76_RS10760 +0.5 2.2 nitroreductase family protein compare
BWI76_RS22815 +0.5 2.9 hybrid sensor histidine kinase/response regulator compare
BWI76_RS16460 +0.5 2.5 oxidoreductase compare
BWI76_RS06895 +0.5 2.1 biopolymer transporter ExbB compare
BWI76_RS05520 +0.5 1.6 hypothetical protein compare
BWI76_RS21675 +0.5 0.4 hypothetical protein compare
BWI76_RS13435 +0.5 0.7 hypothetical protein compare
BWI76_RS17795 +0.5 1.2 ribonuclease D compare
BWI76_RS13315 +0.5 1.0 50S ribosomal protein L7/L12-serine acetyltransferase compare


Specific Phenotypes

None in this experiment

For Klebsiella michiganensis M5al in mixed community experiments

For mixed community Mixed culture; Arthrobacter sp. AnTP99 3:1 starting OD to Klebsiella across organisms