Experiment set14IT033 for Sinorhizobium meliloti 1021

Compare to:

Lactitol carbon source

200 most important genes:

  gene name fitness t score description  
SMc00235 -7.4 -5.1 anthranilate phosphoribosyltransferase compare
SMc02569 -6.6 -4.5 imidazole glycerol phosphate synthase subunit HisF compare
SMc00236 -6.4 -5.7 Indole-3-glycerol phosphate synthase compare
SMc00918 -6.4 -6.3 ATP phosphoribosyltransferase regulatory subunit compare
SMc01843 -6.1 -11.1 5,10-methylenetetrahydrofolate reductase compare
SMc02725 -5.9 -12.1 anthranilate synthase compare
SMc02899 -5.9 -11.4 prephenate dehydratase compare
SMc02217 -5.7 -5.6 O-succinylhomoserine sulfhydrylase compare
SMc02767 -5.6 -11.5 N-(5'-phosphoribosyl)anthranilate isomerase compare
SMc00640 -5.6 -10.1 phosphoserine aminotransferase compare
SMc03823 -5.4 -12.5 isopropylmalate isomerase large subunit compare
SMc00495 -5.3 -4.7 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
SMc04045 -5.2 -9.9 dihydroxy-acid dehydratase compare
SMc01431 -5.2 -14.6 acetolactate synthase 3 catalytic subunit compare
SMc02137 -5.2 -3.6 ornithine carbamoyltransferase compare
SMc00493 -5.2 -7.1 phosphoribosylformylglycinamidine synthase I compare
SMc02717 -5.1 -16.1 2-isopropylmalate synthase compare
SMc01726 -5.1 -4.6 acetylglutamate kinase compare
SMc02766 -5.1 -16.0 tryptophan synthase subunit beta compare
SMc01801 -5.1 -3.4 N-acetylglutamylphosphate reductase (EC 1.2.1.38) (from data) compare
SMc00815 -5.0 -3.3 inosine 5'-monophosphate dehydrogenase compare
SMc00614 -4.9 -8.2 phosphoribosylglycinamide formyltransferase compare
SMc02425 -4.9 -5.9 transcriptional regulator compare
SMc01494 -4.9 -9.9 phosphoserine phosphatase compare
SMc04405 -4.8 -11.0 3-isopropylmalate dehydrogenase compare
SMc00917 -4.8 -5.2 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) compare
SMc00293 -4.8 -12.4 homoserine dehydrogenase compare
SMc03979 -4.6 -3.2 glyceraldehyde-3-phosphate dehydrogenase compare
SMc01004 -4.6 -7.7 phosphoribosyl-AMP cyclohydrolase compare
SMc03069 -4.6 -3.4 6-phosphogluconolactonase compare
SMc03112 -4.6 -15.7 B12-dependent methionine synthase compare
SMc01054 -4.5 -4.5 required for sulfate utilization, putative electron source for sulfite reductase CysI (from data) compare
SMc00488 -4.5 -14.4 phosphoribosylformylglycinamidine synthase II compare
SMc04001 -4.5 -1.8 phosphoribosylaminoimidazole carboxylase catalytic subunit protein compare
SMc02765 -4.5 -10.9 tryptophan synthase subunit alpha compare
SMc03776 -4.5 -3.1 gamma-glutamyl kinase compare
SMc00131 -4.4 -12.6 transcriptional regulator compare
SMc00494 -4.4 -2.4 phosphoribosylformylglycinamidine synthase subunit PurS compare
SMc00092 -4.3 -13.3 phosphoadenosine phosphosulfate reductase compare
SMc00615 -4.3 -11.3 phosphoribosylaminoimidazole synthetase compare
SMc02570 -4.3 -5.6 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
SMc00711 -4.2 -4.6 cyclohexadienyl dehydrogenase compare
SMc02707 -4.1 -6.2 hypothetical protein compare
SMc03777 -4.1 -8.7 gamma-glutamyl phosphate reductase compare
SMc04028 -4.1 -16.8 glutamate synthase compare
SMc02245 -4.0 -6.4 dihydroorotate dehydrogenase 2 compare
SMc03974 -4.0 -4.7 hypothetical protein compare
SMc03763 -3.9 -3.8 cytosine-specific methyltransferase compare
SMc04088 -3.9 -10.1 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
SMc03797 -3.8 -12.5 homoserine O-succinyltransferase compare
SMc04026 -3.8 -6.0 glutamate synthase compare
SMc00554 -3.8 -9.7 amidophosphoribosyltransferase compare
SMc02123 -3.8 -4.6 required for sulfate utilization, putative electron transport protein for sulfite reductase (from data) compare
SMc03795 -3.7 -2.0 isopropylmalate isomerase small subunit compare
SMc04002 -3.6 -8.1 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
SMc02572 -3.6 -2.8 imidazole glycerol phosphate synthase subunit HisH compare
SMc00993 -3.6 -7.9 phosphoribosylamine--glycine ligase compare
SMc02124 -3.6 -12.7 nitrite reductase compare
SMc00882 -3.5 -6.3 2-dehydro-3-deoxy-6-phosphogalactonate aldolase compare
SMc00641 -3.5 -7.9 D-3-phosphoglycerate dehydrogenase compare
SMc01361 -3.5 -6.3 dihydroorotase compare
SMc02246 -3.5 -1.4 hypothetical protein compare
SMc02165 -3.5 -7.4 orotate phosphoribosyltransferase compare
SMa1635 -3.4 -2.3 hypothetical protein compare
SMc00091 -3.4 -11.1 sulfate adenylyltransferase compare
SMc00090 -3.4 -9.0 sulfate adenylyltransferase compare
SMc03826 -3.3 -2.3 argininosuccinate synthase compare
SMc00017 -3.3 -1.7 homoserine kinase compare
SMc02495 -3.2 -2.5 translaldolase compare
SMc02753 -3.2 -2.2 PTS system transporter subunit IIA compare
SMc04346 -3.2 -4.2 ketol-acid reductoisomerase compare
SMc02141 -3.1 -5.3 phosphate transporter PhoU compare
SMc02755 -3.1 -7.1 S-adenosyl-L-homocysteine hydrolase compare
SMc00876 -3.0 -6.7 ATP-binding MRP protein compare
SMc01430 -3.0 -5.4 acetolactate synthase 3 regulatory subunit compare
SMc01053 -3.0 -5.5 siroheme synthase compare
SM_b21175 -2.9 -5.0 phosphate uptake ABC transporter permease compare
SMc03100 -2.9 -1.9 hypothetical protein compare
SMc02145 -2.8 -1.5 signal peptide protein compare
SM_b21655 -2.8 -11.3 Beta-galactosidase (EC 3.2.1.23) (from data) compare
SMc01770 -2.7 -2.2 serine hydroxymethyltransferase compare
SMc02140 -2.6 -1.7 phosphate regulon transcriptional regulatory protein compare
SMc01569 -2.6 -1.4 carbamoyl phosphate synthase small subunit compare
SM_b21176 -2.6 -3.5 phosphate uptake ABC transporter substrate-binding protein precursor compare
SMc02850 -2.5 -4.8 DNA polymerase I compare
SMc02147 -2.5 -6.8 phosphate regulon sensor histidine kinase transmembrane protein compare
SMc00013 -2.5 -2.2 cytochrome C oxidase subunit III transmembrane protein compare
SMc02138 -2.4 -5.3 acetylornithine transaminase compare
SMc00412 -2.4 -4.0 orotidine 5'-phosphate decarboxylase compare
SMc03981 -2.4 -4.2 phosphoglycerate kinase compare
SMc00982 -2.4 -5.6 dioxygenase compare
SMc03895 -2.4 -13.3 pyruvate carboxylase compare
SMc03978 -2.4 -2.8 transketolase compare
SMc01880 -2.3 -3.6 pantoate--beta-alanine ligase compare
SMc02142 -2.3 -5.7 phosphate transporter ATP-binding protein compare
SMc02164 -2.2 -3.1 fructokinase compare
SMc01800 -2.2 -1.3 cytochrome C oxidase assembly transmembrane protein compare
SMc01360 -2.2 -3.8 aspartate carbamoyltransferase catalytic subunit compare
SMc02166 -2.2 -7.2 dihydroorotase compare
SMc04005 -2.2 -6.6 pyruvate kinase compare
SMa1770 -2.1 -1.4 hypothetical protein compare
SMc01568 -2.1 -1.9 hypothetical protein compare
SMc02144 -2.1 -4.6 phosphate ABC transporter permease compare
SMc02047 -2.0 -3.6 glycine cleavage system aminomethyltransferase T compare
SMc02308 -2.0 -4.5 hypothetical protein compare
SMa0789 -2.0 -2.4 GntR family transcriptional regulator compare
SMc01215 -2.0 -2.7 carbamoyl phosphate synthase large subunit compare
SMc00981 -2.0 -6.1 ferredoxin protein compare
SMc04256 -2.0 -10.3 ABC transporter for D-Cellobiose and D-Salicin, ATPase component (from data) conserved
SMc01845 -2.0 -2.4 transglycosylase transmembrane protein compare
SMc02227 -1.9 -4.5 fatty oxidation complex enoyl-COA hydratase/3-hydroxyacyl-COA dehydrogenase/3-hydroxybutyryl-COA epimerase compare
SM_b20758 -1.9 -2.2 ArsR family transcriptional regulator compare
SMc01164 -1.9 -8.1 hypothetical protein compare
SMc02833 -1.8 -2.4 penicillin-insensitive murein endopeptidase compare
SMc02172 -1.8 -7.6 transcriptional regulator compare
SMc01592 -1.8 -5.6 transcriptional regulator compare
SMc02048 -1.8 -7.3 glycine cleavage system protein H compare
SM_b21373 -1.8 -3.0 D-tagatose 6-phosphate 4-epimerase [EC:5.1.3.40] (from data) compare
SMc04257 -1.7 -10.5 ABC transporter for D-Cellobiose and D-Salicin, permease component 1 (from data) conserved
SMc02036 -1.7 -2.3 transcriptional regulator compare
SM_b21652 -1.7 -6.1 ABC transporter for Lactose, periplasmic substrate-binding component (from data) conserved
SMc02724 -1.7 -2.8 hypothetical protein compare
SMc02228 -1.7 -5.3 acetyl-CoA acetyltransferase compare
SMc02505 -1.7 -2.0 hypothetical protein compare
SMc00450 -1.7 -2.8 protoheme IX farnesyltransferase compare
SM_b21035 -1.7 -4.7 hypothetical protein compare
SMc02307 -1.7 -6.1 histidinol dehydrogenase compare
SMc03258 -1.7 -6.9 transcriptional regulator compare
SMc01124 -1.6 -7.5 PII uridylyl-transferase compare
SMc01454 -1.6 -9.6 hypothetical protein compare
SM_b21181 -1.6 -7.7 glutaryl-CoA dehydrogenase compare
SM_b21177 -1.6 -6.0 phosphate uptake ABC transporter ATP-binding protein compare
SMc00294 -1.6 -5.7 aminotransferase compare
SMc01505 -1.6 -1.8 hypothetical protein compare
SM_b20752 -1.6 -6.0 3-hydroxyisobutyryl-CoA hydrolase compare
SMc00451 -1.5 -6.0 processing protease compare
SMc01441 -1.5 -4.5 membrane bound protease compare
SMc01881 -1.5 -2.6 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
SMc02229 -1.5 -8.5 acyl-CoA dehydrogenase compare
SMc02338 -1.5 -1.8 periplasmic binding ABC transporter protein compare
SM_b21174 -1.5 -2.8 phosphate uptake ABC transporter permease compare
SM_b21653 -1.5 -3.9 ABC transporter for Lactose, permease component 1 (from data) compare
SM_b20312 -1.5 -8.1 dihydroxyacetone kinase compare
SMc03993 -1.5 -3.9 hypothetical protein compare
SMc00941 -1.5 -2.0 hypothetical protein compare
SMc01842 -1.5 -1.4 methyltransferase transcription regulator protein compare
SMa0905 -1.5 -1.5 hypothetical protein compare
SM_b20757 -1.5 -6.5 methylmalonyl-CoA mutase compare
SMc04259 -1.5 -3.2 ABC transporter for D-Cellobiose and D-Salicin, periplasmic substrate-binding protein (from data) compare
SMc01428 -1.5 -2.5 cold shock transcription regulator protein compare
SMc04258 -1.4 -8.4 ABC transporter for D-Cellobiose and D-Salicin, permease component 2 (from data) conserved
SMc02112 -1.4 -3.3 hypothetical protein compare
SM_b20148 -1.4 -3.0 transcriptional regulator compare
SMc03242 -1.4 -2.0 GTP-binding protein compare
SMc01622 -1.4 -4.0 oxidoreductase compare
SMc00295 -1.4 -1.4 hypothetical protein compare
SMc00334 -1.4 -2.0 cytidylate kinase compare
SM_b21646 -1.4 -6.2 ABC transporter for D-Raffinose, permease component 2 (from data) compare
SMc03140 -1.4 -4.3 transcriptional regulator compare
SM_b21182 -1.4 -4.3 hypothetical protein compare
SMc02232 -1.3 -3.3 hypothetical protein compare
SM_b20105 -1.3 -1.2 transcriptional regulator compare
SMa0846 -1.3 -1.2 transposase, fragment compare
SMc01768 -1.3 -3.1 transcriptional regulator compare
SMc02234 -1.3 -2.4 hypothetical protein compare
SMc01500 -1.3 -3.8 sorbitol dehydrogenase compare
SM_b21647 -1.3 -8.0 ABC transporter for D-Raffinose, periplasmic substrate-binding protein (from data) compare
SMc00505 -1.3 -2.2 hypothetical protein compare
SMc04085 -1.3 -3.7 hypothetical protein compare
SMc02407 -1.3 -3.4 hypothetical protein compare
SMc01144 -1.3 -3.7 ribonuclease PH compare
SMc02478 -1.3 -6.6 hypothetical protein compare
SMc00709 -1.3 -2.6 hypothetical protein compare
SM_b21173 -1.3 -1.3 hypothetical protein compare
SMc03070 -1.3 -4.3 glucose-6-phosphate 1-dehydrogenase compare
SM_b20392 -1.3 -3.4 transcriptional regulator NanR compare
SMc02049 -1.3 -8.9 glycine dehydrogenase compare
SMc03065 -1.2 -5.8 ABC transporter for D-maltose/D-trehalose/sucrose, ATPase component (AglK) (from data) compare
SMc00511 -1.2 -3.4 D-ribulose-5-phosphate 3-epimerase compare
SMc00012 -1.2 -1.5 cytochrome C oxidase assembly protein compare
SMc01499 -1.2 -6.0 ATP-binding transport ABC transporter protein compare
SMc02435 -1.2 -2.0 methyltransferase compare
SM_b21296 -1.2 -1.6 hypothetical protein compare
SM_b21644 -1.2 -5.1 ABC transporter for D-Raffinose, ATPase component (from data) compare
SMc00191 -1.2 -1.4 hypothetical protein compare
SMc00073 -1.2 -1.9 hypothetical protein compare
SMc02225 -1.2 -3.2 hypothetical protein compare
SMa1639 -1.2 -1.2 hypothetical protein compare
SM_b20302 -1.2 -1.9 hypothetical protein compare
SM_b21132 -1.2 -3.1 sulfate ABC transporter permease compare
SM_b20750 -1.2 -1.7 dehydrogenase compare
SMc00622 -1.2 -4.5 ribonuclease D protein compare
SM_b21645 -1.2 -3.9 ABC transporter for D-Raffinose, permease component 1 (from data) compare
SMa1442 -1.1 -4.1 GntR family transcriptional regulator compare
SM_b21654 -1.1 -4.3 ABC transporter for Lactose, permease component 2 (from data) compare
SMc00522 -1.1 -6.3 ATP-dependent RNA helicase compare
SM_b20258 -1.1 -3.3 transcriptional regulator compare
SMc02690 -1.1 -2.8 hypothetical protein compare
SMc01595 -1.1 -2.1 sensor histidine kinase transmembrane protein compare
SMc02983 -1.1 -3.6 ornithine, DAP, or arginine decarboxylase compare


Specific Phenotypes

For 19 genes in this experiment

For carbon source Lactitol in Sinorhizobium meliloti 1021

For carbon source Lactitol across organisms