Experiment set14IT033 for Klebsiella michiganensis M5al

Compare to:

RCH2_defined_noCarbon with Mixed culture; Microbacterium sp. AnTP90 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x

200 most important genes:

  gene name fitness t score description  
BWI76_RS18930 -7.0 -3.9 histidinol-phosphate transaminase compare
BWI76_RS18940 -6.7 -6.5 imidazole glycerol phosphate synthase subunit HisH compare
BWI76_RS00805 -5.7 -4.2 5,10-methylenetetrahydrofolate reductase compare
BWI76_RS00855 -5.5 -9.2 argininosuccinate lyase compare
BWI76_RS20355 -5.5 -4.6 colicin V production protein compare
BWI76_RS11840 -5.4 -4.1 tryptophan synthase subunit alpha compare
BWI76_RS18925 -5.4 -6.3 histidinol dehydrogenase compare
BWI76_RS25115 -5.1 -9.0 argininosuccinate synthase compare
BWI76_RS18950 -5.1 -3.1 imidazole glycerol phosphate synthase cyclase subunit compare
BWI76_RS00845 -4.9 -10.4 N-acetyl-gamma-glutamyl-phosphate reductase compare
BWI76_RS00980 -4.9 -12.5 PLP-dependent threonine dehydratase compare
BWI76_RS04685 -4.8 -13.1 putative leucine operon leader peptide compare
BWI76_RS04675 -4.8 -6.2 3-isopropylmalate dehydrogenase compare
BWI76_RS21465 -4.7 -7.2 bifunctional chorismate mutase/prephenate dehydratase compare
BWI76_RS18955 -4.7 -4.7 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase compare
BWI76_RS00990 -4.7 -12.1 ketol-acid reductoisomerase compare
BWI76_RS21265 -4.7 -14.1 phosphoribosylformylglycinamidine synthase compare
BWI76_RS23365 -4.6 -3.8 LysR family transcriptional regulator compare
BWI76_RS02995 -4.6 -7.0 aspartate carbamoyltransferase compare
BWI76_RS04245 -4.6 -14.4 bifunctional aspartate kinase/homoserine dehydrogenase I compare
BWI76_RS18920 -4.6 -3.4 ATP phosphoribosyltransferase compare
BWI76_RS22755 -4.6 -3.1 phosphoadenosine phosphosulfate reductase compare
BWI76_RS04255 -4.6 -10.9 threonine synthase compare
BWI76_RS10990 -4.6 -2.3 dihydroorotase compare
BWI76_RS26455 -4.6 -2.3 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase compare
BWI76_RS27385 -4.5 -7.5 orotate phosphoribosyltransferase compare
BWI76_RS20895 -4.4 -5.2 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
BWI76_RS20350 -4.4 -10.5 amidophosphoribosyltransferase compare
BWI76_RS01655 -4.4 -7.2 homoserine O-succinyltransferase compare
BWI76_RS04250 -4.4 -6.4 homoserine kinase compare
BWI76_RS24285 -4.4 -8.0 cystathionine beta-lyase compare
BWI76_RS00850 -4.3 -9.2 acetylglutamate kinase compare
BWI76_RS18935 -4.3 -9.3 bifunctional imidazole glycerol-phosphate dehydratase/histidinol phosphatase compare
BWI76_RS07070 -4.2 -5.7 5-(carboxyamino)imidazole ribonucleotide mutase compare
BWI76_RS04470 -4.2 -10.4 carbamoyl phosphate synthase large subunit compare
BWI76_RS00975 -4.2 -12.7 dihydroxy-acid dehydratase compare
BWI76_RS23265 -4.2 -2.0 hypothetical protein compare
BWI76_RS04665 -4.2 -17.7 3-isopropylmalate dehydratase small subunit compare
BWI76_RS01610 -4.1 -9.8 phosphoribosylamine--glycine ligase compare
BWI76_RS27390 -4.1 -7.7 ribonuclease PH compare
BWI76_RS00835 -4.0 -16.4 phosphoenolpyruvate carboxylase compare
BWI76_RS16965 -4.0 -2.8 murein lipoprotein compare
BWI76_RS05840 -4.0 -2.8 glutamate 5-kinase compare
BWI76_RS04670 -4.0 -10.6 3-isopropylmalate dehydratase large subunit compare
BWI76_RS03010 -4.0 -6.3 ornithine carbamoyltransferase compare
BWI76_RS01615 -4.0 -10.2 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase compare
BWI76_RS22690 -4.0 -2.7 adenylyl-sulfate kinase compare
BWI76_RS17975 -3.9 -5.8 tail-specific protease compare
BWI76_RS08385 -3.9 -4.0 citrate (Si)-synthase compare
BWI76_RS11850 -3.8 -10.9 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase compare
BWI76_RS23220 -3.8 -6.6 amino-acid N-acetyltransferase compare
BWI76_RS00785 -3.7 -6.1 cystathionine gamma-synthase compare
BWI76_RS09910 -3.7 -15.4 dihydroorotate dehydrogenase (quinone) compare
BWI76_RS05015 -3.6 -2.5 transcriptional regulator compare
BWI76_RS17980 -3.6 -3.9 RNA chaperone ProQ compare
BWI76_RS04465 -3.6 -5.1 carbamoyl-phosphate synthase small subunit compare
BWI76_RS04240 -3.6 -1.3 thr operon leader peptide compare
BWI76_RS04680 -3.6 -9.4 2-isopropylmalate synthase compare
BWI76_RS26460 -3.5 -4.2 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
BWI76_RS25335 -3.5 -2.1 stringent starvation protein A compare
BWI76_RS11965 -3.5 -3.8 orotidine-5'-phosphate decarboxylase compare
BWI76_RS08530 -3.4 -1.7 protein TolA compare
BWI76_RS22760 -3.4 -8.1 sulfite reductase subunit beta compare
BWI76_RS00985 -3.3 -8.4 transcriptional regulator IlvY compare
BWI76_RS05835 -3.3 -2.2 gamma-glutamyl-phosphate reductase compare
BWI76_RS11845 -3.3 -2.3 tryptophan synthase subunit beta compare
BWI76_RS04160 -3.3 -3.1 phosphoserine phosphatase compare
BWI76_RS26000 -3.3 -9.3 aspartate aminotransferase family protein compare
BWI76_RS23920 -3.2 -2.2 D-3-phosphoglycerate dehydrogenase compare
BWI76_RS25645 -3.2 -6.4 shikimate dehydrogenase compare
BWI76_RS21475 -3.0 -2.7 bifunctional chorismate mutase/prephenate dehydrogenase compare
BWI76_RS11860 -3.0 -8.5 anthranilate synthase component I compare
BWI76_RS07465 -3.0 -1.4 TetR family transcriptional regulator compare
BWI76_RS22765 -3.0 -9.7 sulfite reductase subunit alpha compare
BWI76_RS11855 -2.9 -7.2 bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase compare
BWI76_RS06535 -2.9 -2.0 endopeptidase La compare
BWI76_RS20965 -2.8 -3.9 phosphoribosylformylglycinamidine cyclo-ligase compare
BWI76_RS25280 -2.8 -1.4 RNase adaptor protein RapZ compare
BWI76_RS01350 -2.8 -1.0 NAD(P)H-flavin reductase compare
BWI76_RS04270 -2.8 -4.9 transaldolase compare
BWI76_RS15825 -2.8 -1.2 hypothetical protein compare
BWI76_RS09760 -2.8 -3.2 3-phosphoshikimate 1-carboxyvinyltransferase compare
BWI76_RS08535 -2.7 -1.6 translocation protein TolB compare
BWI76_RS00875 -2.7 -4.7 DNA-binding transcriptional regulator FabR compare
BWI76_RS08210 -2.7 -1.3 N-acetylglucosamine-6-phosphate deacetylase compare
BWI76_RS08525 -2.6 -2.1 colicin transporter compare
BWI76_RS26620 -2.6 -0.9 Fe-S biogenesis protein NfuA compare
BWI76_RS09645 -2.6 -0.9 thioredoxin-disulfide reductase compare
BWI76_RS08040 -2.6 -1.9 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH compare
BWI76_RS07065 -2.6 -8.9 5-(carboxyamino)imidazole ribonucleotide synthase compare
BWI76_RS20640 -2.6 -4.2 cysteine synthase A compare
BWI76_RS05120 -2.5 -7.3 bifunctional glycosyl transferase/transpeptidase compare
BWI76_RS12070 -2.5 -1.2 hypothetical protein compare
BWI76_RS09755 -2.4 -2.8 phosphoserine transaminase compare
BWI76_RS02815 -2.4 -1.8 fructose-bisphosphatase class I compare
BWI76_RS08520 -2.4 -2.2 colicin transporter TolQ compare
BWI76_RS08395 -2.4 -2.0 succinate dehydrogenase cytochrome b556 large subunit compare
BWI76_RS18815 -2.3 -2.3 nitrogenase molybdenum-iron protein alpha chain compare
BWI76_RS21070 -2.3 -1.8 outer membrane protein assembly factor BamB compare
BWI76_RS11300 -2.3 -1.1 cupin compare
BWI76_RS25315 -2.3 -13.1 glutamate synthase large subunit compare
BWI76_RS01800 -2.3 -2.7 glucose-6-phosphate isomerase compare
BWI76_RS26395 -2.3 -6.3 cell division protein FtsE compare
BWI76_RS25065 -2.3 -4.8 polyribonucleotide nucleotidyltransferase compare
BWI76_RS24595 -2.3 -3.8 dihydroxyacetone kinase subunit DhaK compare
BWI76_RS26390 -2.3 -5.7 cell division protein FtsX compare
BWI76_RS04705 -2.2 -4.5 DNA-binding transcriptional regulator FruR compare
BWI76_RS25920 -2.2 -1.7 peptidylprolyl isomerase compare
BWI76_RS09670 -2.2 -3.1 recombination factor protein RarA compare
BWI76_RS09655 -2.1 -5.1 leucine-responsive regulatory protein compare
BWI76_RS21310 -2.1 -1.4 DNA repair protein RecO compare
BWI76_RS23360 -2.1 -1.3 diaminopimelate decarboxylase compare
BWI76_RS27820 -2.1 -0.9 ilvB operon leader peptide IvbL compare
BWI76_RS09615 -2.1 -3.0 ATP-dependent Clp protease ATP-binding subunit ClpA compare
BWI76_RS26245 -2.1 -4.3 transcriptional regulator compare
BWI76_RS25320 -2.0 -7.7 glutamate synthase compare
BWI76_RS02530 -2.0 -1.3 tRNA dimethylallyltransferase compare
BWI76_RS19840 -2.0 -0.7 hypothetical protein compare
BWI76_RS21580 -2.0 -1.4 SsrA-binding protein compare
BWI76_RS09730 -2.0 -0.9 pyruvate formate lyase 1-activating protein compare
BWI76_RS12170 -2.0 -3.2 hypothetical protein compare
BWI76_RS13160 -2.0 -1.8 azoreductase compare
BWI76_RS01385 -1.9 -2.2 potassium transporter compare
BWI76_RS26440 -1.9 -1.3 hypothetical protein compare
BWI76_RS04645 -1.9 -3.0 3-dehydroquinase compare
BWI76_RS01080 -1.9 -5.8 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase compare
BWI76_RS22805 -1.9 -9.1 GTP diphosphokinase compare
BWI76_RS24605 -1.9 -5.1 dihydroxyacetone kinase subunit DhaM compare
BWI76_RS00240 -1.9 -1.5 FMN-binding protein MioC compare
BWI76_RS26055 -1.9 -8.3 siroheme synthase compare
BWI76_RS07510 -1.9 -2.4 hypothetical protein compare
BWI76_RS00960 -1.8 -3.2 acetolactate synthase 2 catalytic subunit compare
BWI76_RS09970 -1.8 -1.1 porin OmpA compare
BWI76_RS01125 -1.8 -4.7 4-alpha-L-fucosyltransferase compare
BWI76_RS00180 -1.8 -0.9 F0F1 ATP synthase subunit epsilon compare
BWI76_RS01110 -1.8 -5.3 TDP-fucosamine acetyltransferase compare
BWI76_RS06680 -1.8 -1.2 hypothetical protein compare
BWI76_RS09825 -1.8 -5.3 envelope biogenesis factor ElyC compare
BWI76_RS09335 -1.8 -1.2 baseplate assembly protein W compare
BWI76_RS09735 -1.7 -3.4 formate acetyltransferase compare
BWI76_RS24580 -1.7 -3.7 PTS-dependent dihydroxyacetone kinase operon transcriptional regulator DhaR compare
BWI76_RS26470 -1.7 -3.0 4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase compare
BWI76_RS15195 -1.7 -1.7 DUF4186 domain-containing protein compare
BWI76_RS00345 -1.7 -3.5 protein disulfide oxidoreductase DsbA compare
BWI76_RS01115 -1.7 -1.7 dTDP-4-amino-4,6-dideoxygalactose transaminase compare
BWI76_RS02775 -1.7 -3.2 outer membrane protein assembly factor compare
BWI76_RS04305 -1.7 -1.1 molecular chaperone DnaJ compare
BWI76_RS21780 -1.7 -2.4 S-(hydroxymethyl)glutathione synthase compare
BWI76_RS27440 -1.7 -1.1 DNA helicase RecG compare
BWI76_RS22090 -1.7 -1.9 transcriptional regulator compare
BWI76_RS00965 -1.6 -0.8 acetolactate synthase 2 small subunit compare
BWI76_RS00355 -1.6 -0.8 DNA polymerase I compare
BWI76_RS26095 -1.6 -0.8 shikimate kinase compare
BWI76_RS19685 -1.6 -2.7 lysine transporter compare
BWI76_RS20750 -1.6 -0.7 carboxysome structural protein EutK compare
BWI76_RS08580 -1.6 -2.9 quinolinate synthetase compare
BWI76_RS21340 -1.6 -1.4 SoxR reducing system protein RseC compare
BWI76_RS10935 -1.5 -4.0 glucan biosynthesis glucosyltransferase H compare
BWI76_RS15350 -1.5 -1.0 hypothetical protein compare
BWI76_RS15110 -1.5 -3.8 putative excinuclease ABC subunit A compare
BWI76_RS15920 -1.5 -1.3 hypothetical protein compare
BWI76_RS01090 -1.5 -4.3 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) compare
BWI76_RS14305 -1.5 -3.6 metallophosphoesterase compare
BWI76_RS23490 -1.5 -3.7 fimbrial protein compare
BWI76_RS10930 -1.5 -5.8 glucan biosynthesis protein G compare
BWI76_RS01235 -1.5 -2.5 hypothetical protein compare
BWI76_RS02735 -1.5 -1.8 3'(2'),5'-bisphosphate nucleotidase CysQ compare
BWI76_RS06730 -1.5 -1.8 lac repressor compare
BWI76_RS24740 -1.5 -1.9 GntR family transcriptional regulator compare
BWI76_RS12215 -1.5 -5.1 HNH endonuclease compare
BWI76_RS23480 -1.5 -11.1 EAL domain-containing protein compare
BWI76_RS19010 -1.5 -2.1 polysaccharide pyruvyl transferase yvff compare
BWI76_RS01220 -1.5 -4.4 DNA-dependent helicase II compare
BWI76_RS21690 -1.5 -1.5 hypothetical protein compare
BWI76_RS07785 -1.4 -1.5 transcriptional regulator compare
BWI76_RS05450 -1.4 -0.6 ribonuclease HI compare
BWI76_RS25870 -1.4 -1.2 elongation factor Tu compare
BWI76_RS00720 -1.4 -1.4 DNA-binding response regulator compare
BWI76_RS09190 -1.4 -1.3 hypothetical protein compare
BWI76_RS25060 -1.4 -3.6 lipoprotein NlpI compare
BWI76_RS20440 -1.4 -2.5 50S ribosomal protein L3 N(5)-glutamine methyltransferase compare
BWI76_RS15115 -1.4 -1.3 MFS transporter compare
BWI76_RS17720 -1.4 -0.4 muramoyltetrapeptide carboxypeptidase compare
BWI76_RS21660 -1.4 -1.3 antirestriction protein compare
BWI76_RS01135 -1.4 -4.5 lipopolysaccharide N-acetylmannosaminouronosyltransferase compare
BWI76_RS26570 -1.4 -0.9 anion permease compare
BWI76_RS00715 -1.4 -0.9 two-component sensor histidine kinase compare
BWI76_RS08495 -1.4 -3.4 cytochrome bd-I ubiquinol oxidase subunit I compare
BWI76_RS01325 -1.4 -1.9 twin-arginine translocase subunit TatB compare
BWI76_RS09870 -1.4 -5.6 aromatic amino acid aminotransferase compare
BWI76_RS12090 -1.4 -1.2 HNH endonuclease compare
BWI76_RS00390 -1.4 -5.2 two-component system sensor histidine kinase NtrB compare
BWI76_RS00385 -1.4 -5.8 nitrogen assimilation regulatory protein compare
BWI76_RS16200 -1.4 -1.3 NAD(P) transhydrogenase subunit beta compare
BWI76_RS13480 -1.3 -1.0 XRE family transcriptional regulator compare
BWI76_RS02610 -1.3 -4.2 transcriptional regulator compare
BWI76_RS19730 -1.3 -2.5 1-phosphofructokinase compare
BWI76_RS25070 -1.3 -1.2 hypothetical protein compare
BWI76_RS16275 -1.3 -2.6 fumarate hydratase FumA compare
BWI76_RS20360 -1.3 -0.7 cell division protein DedD compare


Specific Phenotypes

None in this experiment

For Klebsiella michiganensis M5al in mixed community experiments

For mixed community Mixed culture; Microbacterium sp. AnTP90 3:1 starting OD to Klebsiella across organisms