Experiment set14IT032 for Sinorhizobium meliloti 1021

Compare to:

Lactulose carbon source

200 most detrimental genes:

  gene name fitness t score description  
SMc04260 +4.6 37.9 transcriptional regulator compare
SMc03060 +2.1 14.5 transcriptional regulator compare
SM_b21650 +2.0 15.0 LacI family transcriptional regulator compare
SMc03798 +1.7 11.6 aldose 1-epimerase compare
SMc00053 +1.5 2.2 monovalent cation/H+ antiporter subunit C compare
SMc00588 +1.4 4.2 L-arabinose 1-dehydrogenase; D-galactose 1-dehydrogenase (EC 1.1.1.46; EC 1.1.1.48) (from data) compare
SMa1365 +1.1 2.1 ATP-binding protein compare
SMc02485 +1.0 1.3 signal peptide protein compare
SMc04092 +0.9 1.4 hypothetical protein compare
SMc00405 +0.9 6.0 hypothetical protein compare
SMa2303 +0.9 6.7 ROK family transcriptional regulator compare
SMc02107 +0.9 1.6 hypothetical protein compare
SMc04003 +0.8 1.2 50S ribosomal protein L36 compare
SM_b20387 +0.8 2.0 transcriptional regulator compare
SMc01933 +0.8 1.8 hypothetical protein compare
SMc01723 +0.8 2.2 hypothetical protein compare
SMc01419 +0.8 1.9 RNA polymerase sigma factor protein compare
SMa5010 +0.8 1.5 hypothetical protein compare
SMc02497 +0.7 1.5 hypothetical protein compare
SMc02247 +0.7 1.2 signal peptide protein compare
SM_b20089 +0.7 2.6 hypothetical protein compare
SMc02503 +0.7 4.0 hypothetical protein compare
SMc02858 +0.7 0.7 chaperone protein DnaJ compare
SM_b20357 +0.7 1.7 histidine kinase compare
SMc01139 +0.7 3.5 RNA polymerase factor sigma-54 compare
SMc02388 +0.7 2.9 hypothetical protein compare
SMc02052 +0.7 0.8 hypothetical protein compare
SMc02280 +0.7 1.7 hypothetical protein compare
SMc02877 +0.6 1.7 hypothetical protein compare
SMc01613 +0.6 2.3 ribose-5-phosphate isomerase B compare
SMc00800 +0.6 1.5 hypothetical protein compare
SM_b20577 +0.6 2.9 protocatechuate 3,4-dioxygenase subunit beta compare
SM_b20896 +0.6 2.0 LysR family transcriptional regulator compare
SMa1174 +0.6 1.7 hypothetical protein compare
SM_b21266 +0.6 3.3 hypothetical protein compare
SM_b21643 +0.6 3.9 alpha-galactosidase (melibiase) protein compare
SM_b20050 +0.6 1.8 hypothetical protein compare
SMa1053 +0.6 0.8 hypothetical protein compare
SM_b21679 +0.6 1.1 hypothetical protein compare
SM_b20260 +0.6 1.5 hypothetical protein compare
SMc01275 +0.6 3.6 ribosomal large subunit pseudouridine synthase C protein compare
SMa0754 +0.6 1.5 hypothetical protein compare
SMc01939 +0.6 0.8 urease subunit beta compare
SMc00555 +0.6 0.8 colicin V production transmembrane protein compare
SMa2053 +0.6 1.1 MocE-like protein compare
SMc04404 +0.6 1.2 amino acid efflux transmembrane protein compare
SMc00877 +0.6 3.8 transcriptional regulator compare
SMc02366 +0.6 4.3 transcriptional regulator compare
SM_b21674 +0.6 2.0 hypothetical protein compare
SMc03899 +0.6 0.8 hypothetical protein compare
SMa2253 +0.6 1.2 hypothetical protein compare
SM_b20384 +0.6 2.8 dipeptidase compare
SMc04210 +0.6 2.9 hypothetical protein compare
SMa1092 +0.6 1.5 hypothetical protein compare
SMc04189 +0.6 2.4 hypothetical protein compare
SMc01418 +0.5 2.1 signal peptide protein compare
SMc03053 +0.5 1.2 flagellar biosynthesis protein FliQ compare
SMc01039 +0.5 1.6 hypothetical protein compare
SMc02084 +0.5 0.7 biopolymer transport transmembrane protein compare
SMc01244 +0.5 1.6 tRNA-Ala compare
SMc00580 +0.5 1.8 4-hydroxythreonine-4-phosphate dehydrogenase compare
SMc00045 +0.5 1.3 cytochrome C signal peptide protein compare
SM_b21401 +0.5 2.7 hypothetical protein compare
SMc02367 +0.5 3.0 sensor histidine kinase transmembrane protein compare
SMc01099 +0.5 1.4 tRNA pseudouridine synthase A compare
SM_b21200 +0.5 2.8 two-component response regulator protein compare
SM_b20414 +0.5 1.5 hypothetical protein compare
SMc00030 +0.5 2.5 hypothetical protein compare
SM_b20184 +0.5 1.6 ABC transporter ATP-binding protein compare
SMa0734 +0.5 1.4 hypothetical protein compare
SM_b20029 +0.5 1.4 hypothetical protein compare
SMc01009 +0.5 1.6 hypothetical protein compare
SMa1533 +0.5 2.2 NuoA2 NADH I chain A compare
SMc00684 +0.5 1.7 hypothetical protein compare
SMc03131 +0.5 3.3 amino acid-binding periplasmic ABC transporter protein compare
SMc00420 +0.5 1.9 hypothetical protein compare
SMc03279 +0.5 1.0 transposase number 2 for insertion sequence ISRM28 compare
SM_b20767 +0.5 2.1 dihydroxyacetone kinase compare
SM_b20725 +0.5 1.2 hypothetical protein compare
SMc01024 +0.5 0.8 preprotein translocase subunit SecG compare
SM_b20320 +0.5 0.8 TRAP-type large permease component compare
SMc03961 +0.5 2.7 sulfolipid (UDP-sulfoquinovose) biosynthesis protein compare
SM_b21487 +0.5 3.0 cytochrome o ubiquinol oxidase subunit II compare
SM_b20376 +0.5 2.7 hypothetical protein compare
SMc02381 +0.5 1.5 hypothetical protein compare
SMc03963 +0.5 3.4 sulfolipid biosynthesis protein compare
SMc00418 +0.5 2.0 hypothetical protein compare
SM_b20131 +0.5 1.2 oxidoreductase compare
SMc03127 +0.5 0.8 ABC transporter permease compare
SM_b21395 +0.5 0.9 hypothetical protein compare
SMc03066 +0.5 0.8 hypothetical protein compare
SM_b20474 +0.5 0.9 hypothetical protein compare
SMa5025 +0.5 1.8 hypothetical protein compare
SMa1002 +0.5 0.8 hypothetical protein compare
SM_b20303 +0.5 1.3 hypothetical protein compare
SMc02618 +0.4 2.3 hypothetical protein compare
SMc04081 +0.4 3.1 glycosyl transferase (sulfolipid biosynthesis) protein compare
SMc00116 +0.4 2.2 hypothetical protein compare
SM_b21432 +0.4 1.8 iron uptake ABC transporter substrate-binding protein precursor compare
SMc03984 +0.4 1.5 hypothetical protein compare
SM_b21489 +0.4 1.4 cytochrome O ubiquinol oxidase subunit III compare
SM_b21108 +0.4 1.2 L-fucose mutarotase (EC 5.1.3.29) (from data) compare
SMc04253 +0.4 3.3 oxidoreductase compare
SMc04174 +0.4 1.0 signal peptide protein compare
SMc02095 +0.4 2.6 hypothetical protein compare
SMc00878 +0.4 3.1 transcriptional regulator compare
SMc02312 +0.4 1.4 zinc-binding protein compare
SM_b20267 +0.4 1.2 D-amino acid dehydrogenase compare
SMc03999 +0.4 1.7 hypothetical protein compare
SMc03068 +0.4 2.5 phosphogluconate dehydratase compare
SMc04020 +0.4 1.8 hypothetical protein compare
SMa1822 +0.4 2.2 hypothetical protein compare
SMc00373 +0.4 2.2 hypothetical protein compare
SMc01970 +0.4 2.2 hypothetical protein compare
SMc02860 +0.4 1.3 hypothetical protein compare
SMc02181 +0.4 3.4 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase compare
SMa1245 +0.4 1.8 Crp/fnr-like transcriptional regulator compare
SM_b21166 +0.4 2.5 Imidazolonepropionase (EC 3.5.2.7) (from data) compare
SMa0499 +0.4 2.7 hypothetical protein compare
SMc01717 +0.4 1.5 mercuric reductase compare
SMa0882 +0.4 0.9 hypothetical protein compare
SMc01337 +0.4 0.6 hypothetical protein compare
SM_b21697 +0.4 2.0 hypothetical protein compare
SMc01808 +0.4 1.2 hypothetical protein compare
SM_b21380 +0.4 2.6 catechol 1,2-dioxygenase compare
SMc04239 +0.4 1.7 hypothetical protein compare
SM_b20383 +0.4 1.7 ABC transporter substrate-binding protein compare
SMa1556 +0.4 2.1 Methyl-accepting chemotaxis protein compare
SMa0740 +0.4 1.1 hypothetical protein compare
SMc01812 +0.4 2.3 cytochrome P450-like monooxygenase compare
SM_b21310 +0.4 1.3 hypothetical protein compare
SM_b21576 +0.4 2.0 ArsR family transcriptional regulator compare
SMc04266 +0.4 0.9 hypothetical protein compare
SM_b21055 +0.4 2.9 hypothetical protein compare
SM_b21482 +0.4 1.2 hypothetical protein compare
SM_b20017 +0.4 2.2 sugar ABC transporter ATP-binding protein compare
SM_b20364 +0.4 1.6 iron ABC transporter permease compare
SMc03056 +0.4 2.1 hypothetical protein compare
SMc04453 +0.4 0.6 hypothetical protein compare
SM_b20530 +0.4 1.8 hypothetical protein compare
SM_b20265 +0.4 1.4 amino acid ABC transporter permease compare
SM_b21665 +0.4 1.6 hypothetical protein compare
SM_b21636 +0.4 2.1 ferredoxin reductase electron transfer protein compare
SM_b20374 +0.4 1.6 substrate-binding protein compare
SM_b20200 +0.4 2.3 transketolase compare
SMc03124 +0.4 1.6 periplasmic binding ABC transporter protein compare
SM_b21112 +0.4 2.0 L-2,4-diketo-3-deoxyrhamnonate hydrolase; 2,4-dioxopentanoate hydrolase (from data) compare
SMc00521 +0.4 1.0 hypothetical protein compare
SMa1595 +0.4 1.4 hypothetical protein compare
SM_b20209 +0.4 1.4 hypothetical protein compare
SMa1933 +0.4 1.5 LysR family transcriptional regulator compare
SM_b21400 +0.4 1.0 hypothetical protein compare
SM_b20448 +0.4 1.2 hypothetical protein compare
SM_b21280 +0.4 1.2 phosphoribosyltransferase compare
SMc00507 +0.4 0.9 hypothetical protein compare
SMc03786 +0.4 1.4 bacterioferritin compare
SMc00041 +0.4 1.3 hypothetical protein compare
SMc03162 +0.4 2.8 3-ketoglucose dehydratase (from data) compare
SMc02834 +0.4 2.2 methylglyoxal synthase compare
SMc00795 +0.4 1.9 hypothetical protein compare
SMc00099 +0.4 1.0 alkylphosphonate uptake protein compare
SMc01223 +0.4 0.7 transcriptional regulator compare
SM_b20347 +0.4 1.0 transcriptional regulator compare
SMc02171 +0.4 1.6 periplasmic binding ABC transporter protein compare
SMa1630 +0.4 0.9 hypothetical protein compare
SM_b20774 +0.4 0.9 hypothetical protein compare
SMc02504 +0.4 1.9 transcriptional regulator compare
SMc03781 +0.4 1.3 rRNA large subunit methyltransferase compare
SMa1960 +0.4 1.3 hypothetical protein compare
SMc04457 +0.4 1.4 hypothetical protein compare
SMc00650 +0.4 0.9 hypothetical protein compare
SMc00040 +0.4 1.8 hypothetical protein compare
SMc02341 +0.4 2.2 sugar kinase compare
SM_b21049 +0.4 1.1 hypothetical protein compare
SMa1318 +0.4 1.2 VirB3 type IV secretion protein compare
SMc04441 +0.4 1.9 hypothetical protein compare
SM_b21013 +0.4 1.3 hypothetical protein compare
SM_b20765 +0.4 2.5 acetyltransferase compare
SM_b21511 +0.4 0.8 plasmid stability protein compare
SMc02243 +0.4 1.4 hypothetical protein compare
SMa0886 +0.4 0.6 hypothetical protein compare
SMa0052 +0.4 1.3 hypothetical protein compare
SMa1576 +0.4 1.4 CpaB2 pilus assembly protein compare
SM_b21025 +0.4 1.7 hypothetical protein compare
SMc02272 +0.4 2.4 acyl-transferase transferase compare
SM_b20197 +0.3 1.8 ribulose-1,5-bisphosphate carboxylase small subunit (EC 4.1.1.39) (from data) compare
SMa1213 +0.3 1.4 FixP1 di-heme cytochrome c compare
SMa0340 +0.3 1.7 TrpR binding protein WrbA compare
SMc04094 +0.3 0.8 hypothetical protein compare
SMc01434 +0.3 0.9 hypothetical protein compare
SMc00670 +0.3 1.4 histidine transport ATP-binding ABC transporter protein compare
SMc02046 +0.3 0.5 hypothetical protein compare
SM_b21398 +0.3 0.6 hypothetical protein compare
SM_b20771 +0.3 2.3 hypothetical protein compare
SMc00667 +0.3 0.7 hypothetical protein compare
SM_b21350 +0.3 1.5 GntR family transcriptional regulator compare
SMc03836 +0.3 0.6 acyl-CoA thioesterase i protein compare
SM_b20343 +0.3 1.1 isoquinoline 1-oxidoreductase compare
SMc00849 +0.3 1.4 hypothetical protein compare
SMa1943 +0.3 1.2 transcriptional regulator compare


Specific Phenotypes

For 8 genes in this experiment

For carbon source Lactulose in Sinorhizobium meliloti 1021

For carbon source Lactulose across organisms