Experiment set14IT032 for Pseudomonas fluorescens SBW25-INTG

Compare to:

Glucose (C) and Betaine (N); with MOPS; with Sodium chloride

200 most detrimental genes:

  gene name fitness t score description  
PFLU_RS28310 +2.3 2.8 response regulator compare
PFLU_RS14715 +2.0 11.8 protein-glutamate O-methyltransferase CheR compare
PFLU_RS22600 +1.9 4.0 RNA polymerase sigma factor SigX compare
PFLU_RS00460 +1.5 10.0 glutamate/aspartate:proton symporter GltP compare
PFLU_RS07525 +1.5 3.5 cyclic nucleotide-binding domain-containing protein compare
PFLU_RS29810 +1.4 9.5 LysR family transcriptional regulator compare
PFLU_RS14995 +1.4 2.2 response regulator transcription factor compare
PFLU_RS25865 +1.3 3.7 YhbY family RNA-binding protein compare
PFLU_RS18735 +1.3 1.1 hypothetical protein compare
PFLU_RS18725 +1.3 2.1 alpha/beta hydrolase compare
PFLU_RS27440 +1.2 5.5 nucleotidyltransferase family protein compare
PFLU_RS00435 +1.2 9.6 PAS domain-containing protein compare
PFLU_RS01885 +1.2 6.0 Sec-independent protein translocase subunit TatB compare
PFLU_RS11380 +1.2 2.4 sarcosine oxidase subunit delta compare
PFLU_RS15800 +1.2 4.1 immunity 49 family protein compare
PFLU_RS18350 +1.1 1.4 GIY-YIG nuclease family protein compare
PFLU_RS21925 +1.1 3.6 YecA family protein compare
PFLU_RS13950 +1.1 2.5 hypothetical protein compare
PFLU_RS19550 +1.1 1.1 ABC transporter ATP-binding protein compare
PFLU_RS08285 +1.0 3.1 hypothetical protein compare
PFLU_RS28895 +1.0 1.4 DUF2388 domain-containing protein compare
PFLU_RS21710 +1.0 6.9 flagellar type III secretion system pore protein FliP compare
PFLU_RS15600 +1.0 3.5 ketoacyl-ACP synthase III compare
PFLU_RS08350 +1.0 2.3 ABC transporter ATP-binding protein compare
PFLU_RS17750 +1.0 2.1 pirin family protein compare
PFLU_RS28265 +1.0 2.8 malonate decarboxylase subunit delta compare
PFLU_RS21705 +0.9 5.8 flagellar biosynthesis protein FliQ compare
PFLU_RS15515 +0.9 2.7 hypothetical protein compare
PFLU_RS03575 +0.9 1.3 hypothetical protein compare
PFLU_RS30900 +0.9 1.4 hypothetical protein compare
PFLU_RS16530 +0.9 3.0 hypothetical protein compare
PFLU_RS31840 +0.9 1.8 hypothetical protein compare
PFLU_RS21110 +0.9 2.3 AAA family ATPase compare
PFLU_RS13825 +0.9 1.8 hypothetical protein compare
PFLU_RS04740 +0.9 2.6 hypothetical protein compare
PFLU_RS31620 +0.9 2.4 integrase compare
PFLU_RS31690 +0.9 3.0 hypothetical protein compare
PFLU_RS18000 +0.9 1.5 AhpC/TSA family protein compare
PFLU_RS14305 +0.9 1.4 sensor histidine kinase compare
PFLU_RS30500 +0.8 2.7 LapA family protein compare
PFLU_RS31275 +0.8 1.0 hypothetical protein compare
PFLU_RS11210 +0.8 2.7 ABC transporter ATP-binding protein compare
PFLU_RS03555 +0.8 0.9 EscS/YscS/HrcS family type III secretion system export apparatus protein compare
PFLU_RS04205 +0.8 5.7 cytochrome c1 compare
PFLU_RS17895 +0.8 3.9 glycosyltransferase family 2 protein compare
PFLU_RS25320 +0.8 2.4 DUF1244 domain-containing protein compare
PFLU_RS17955 +0.8 3.9 hypothetical protein compare
PFLU_RS25920 +0.8 1.4 outer membrane protein assembly factor BamE compare
PFLU_RS11850 +0.8 1.2 prepilin-type N-terminal cleavage/methylation domain-containing protein compare
PFLU_RS11670 +0.8 2.5 SDR family oxidoreductase compare
PFLU_RS07910 +0.8 1.9 type 1 fimbrial protein compare
PFLU_RS31490 +0.8 1.0 hypothetical protein compare
PFLU_RS21760 +0.8 5.7 flagellar protein export ATPase FliI compare
PFLU_RS21780 +0.8 2.5 flagellar hook-basal body complex protein FliE compare
PFLU_RS21765 +0.8 3.9 flagellar assembly protein FliH compare
PFLU_RS02215 +0.8 1.0 hypothetical protein compare
PFLU_RS04195 +0.8 3.3 ubiquinol-cytochrome c reductase iron-sulfur subunit compare
PFLU_RS26805 +0.8 2.9 hydrolase compare
PFLU_RS16775 +0.8 3.5 GNAT family N-acetyltransferase compare
PFLU_RS01020 +0.8 1.9 LysR family transcriptional regulator compare
PFLU_RS31825 +0.8 2.2 hypothetical protein compare
PFLU_RS21675 +0.8 6.2 flagellar biosynthesis protein FlhA compare
PFLU_RS14805 +0.8 0.9 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF compare
PFLU_RS01320 +0.8 4.0 phosphoenolpyruvate carboxykinase compare
PFLU_RS17920 +0.8 1.1 acyltransferase compare
PFLU_RS01910 +0.7 0.8 sterol-binding protein compare
PFLU_RS24020 +0.7 2.8 RDD family protein compare
PFLU_RS00210 +0.7 1.4 OsmC family protein compare
PFLU_RS08065 +0.7 3.7 N-acetylmuramic acid 6-phosphate phosphatase MupP compare
PFLU_RS24300 +0.7 1.5 hypothetical protein compare
PFLU_RS27985 +0.7 3.4 transcriptional regulator BetI compare
PFLU_RS15225 +0.7 2.8 AMP-binding protein compare
PFLU_RS00410 +0.7 4.8 cytochrome c4 compare
PFLU_RS29315 +0.7 2.0 hypothetical protein compare
PFLU_RS23180 +0.7 5.1 flagellar basal body rod protein FlgB compare
PFLU_RS17390 +0.7 1.7 DUF4880 domain-containing protein compare
PFLU_RS27690 +0.7 1.1 response regulator compare
PFLU_RS16510 +0.7 1.7 thiol-disulfide oxidoreductase DCC family protein compare
PFLU_RS10045 +0.7 1.7 hypothetical protein compare
PFLU_RS01835 +0.7 5.1 glucan biosynthesis protein G compare
PFLU_RS26660 +0.7 1.5 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH compare
PFLU_RS28210 +0.7 2.0 RidA family protein compare
PFLU_RS25300 +0.7 2.8 antibiotic biosynthesis monooxygenase compare
PFLU_RS21770 +0.7 4.2 flagellar motor switch protein FliG compare
PFLU_RS15265 +0.7 2.9 EAL domain-containing response regulator compare
PFLU_RS29050 +0.7 3.5 transporter substrate-binding domain-containing protein compare
PFLU_RS31590 +0.7 0.7 hypothetical protein compare
PFLU_RS31755 +0.7 0.8 hypothetical protein compare
PFLU_RS26455 +0.7 2.7 3'-5' exonuclease compare
PFLU_RS25225 +0.7 3.6 disulfide bond formation protein B compare
PFLU_RS05910 +0.7 1.0 response regulator transcription factor compare
PFLU_RS03980 +0.7 3.7 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD compare
PFLU_RS14125 +0.7 1.6 lysozyme compare
PFLU_RS00195 +0.7 1.0 dodecin domain-containing protein compare
PFLU_RS01095 +0.7 1.7 ribbon-helix-helix protein, CopG family compare
PFLU_RS21855 +0.7 3.8 flagellar basal-body rod protein FlgG compare
PFLU_RS07600 +0.7 1.3 23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM compare
PFLU_RS09675 +0.7 2.8 hypothetical protein compare
PFLU_RS20415 +0.7 2.9 hypothetical protein compare
PFLU_RS17340 +0.7 2.3 AAA family ATPase compare
PFLU_RS12145 +0.7 1.2 nuclear transport factor 2 family protein compare
PFLU_RS05795 +0.7 2.0 phage baseplate assembly protein V compare
PFLU_RS14880 +0.7 2.4 hypothetical protein compare
PFLU_RS00535 +0.7 1.3 DUF1127 domain-containing protein compare
PFLU_RS15040 +0.7 1.9 glyoxalase compare
PFLU_RS16895 +0.7 2.1 thioesterase compare
PFLU_RS02585 +0.7 3.0 protease modulator HflC compare
PFLU_RS30470 +0.7 1.3 addiction module antidote protein compare
PFLU_RS01840 +0.6 5.3 glucans biosynthesis glucosyltransferase MdoH compare
PFLU_RS30730 +0.6 1.5 helix-turn-helix domain-containing protein compare
PFLU_RS21775 +0.6 4.7 flagellar basal body M-ring protein FliF compare
PFLU_RS30485 +0.6 1.8 hypothetical protein compare
PFLU_RS08670 +0.6 2.6 heme lyase CcmF/NrfE family subunit compare
PFLU_RS31645 +0.6 1.0 hypothetical protein compare
PFLU_RS18080 +0.6 1.2 helix-turn-helix transcriptional regulator compare
PFLU_RS11930 +0.6 1.0 biopolymer transporter ExbD compare
PFLU_RS01880 +0.6 4.1 twin-arginine translocase subunit TatC compare
PFLU_RS05340 +0.6 1.6 SDR family NAD(P)-dependent oxidoreductase compare
PFLU_RS12830 +0.6 4.6 PAS domain-containing protein compare
PFLU_RS18885 +0.6 0.7 peptidyl-prolyl cis-trans isomerase compare
PFLU_RS19325 +0.6 2.3 DASS family sodium-coupled anion symporter compare
PFLU_RS14430 +0.6 1.0 arsenate reductase ArsC compare
PFLU_RS12615 +0.6 2.0 oxidoreductase compare
PFLU_RS31820 +0.6 1.7 MFS sugar transporter compare
PFLU_RS21660 +0.6 4.8 RNA polymerase sigma factor FliA compare
PFLU_RS03100 +0.6 0.9 hypothetical protein compare
PFLU_RS23595 +0.6 4.6 LacI family DNA-binding transcriptional regulator conserved
PFLU_RS27445 +0.6 4.9 phosphotransferase compare
PFLU_RS02505 +0.6 3.5 HDOD domain-containing protein compare
PFLU_RS27265 +0.6 1.6 bifunctional biotin--[acetyl-CoA-carboxylase] synthetase/biotin operon repressor compare
PFLU_RS28815 +0.6 2.1 transporter compare
PFLU_RS14135 +0.6 2.4 hypothetical protein compare
PFLU_RS19685 +0.6 3.0 MFS transporter compare
PFLU_RS21755 +0.6 3.3 flagella biosynthesis chaperone FliJ compare
PFLU_RS07695 +0.6 1.6 beta-N-acetylhexosaminidase compare
PFLU_RS30630 +0.6 1.0 hypothetical protein compare
PFLU_RS14420 +0.6 1.7 chemotactic transduction protein ChpE compare
PFLU_RS31445 +0.6 2.0 colicin immunity protein compare
PFLU_RS13375 +0.6 1.9 carbohydrate kinase compare
PFLU_RS24635 +0.6 3.1 L,D-transpeptidase family protein compare
PFLU_RS21700 +0.6 2.8 flagellar type III secretion system protein FliR compare
PFLU_RS15635 +0.6 3.2 nitrile hydratase subunit alpha compare
PFLU_RS23195 +0.6 4.6 flagellar basal body P-ring formation protein FlgA compare
PFLU_RS13610 +0.6 1.1 ABC transporter ATP-binding protein compare
PFLU_RS29290 +0.6 1.6 hypothetical protein compare
PFLU_RS24475 +0.6 5.3 AmpG family muropeptide MFS transporter compare
PFLU_RS22535 +0.6 4.5 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase compare
PFLU_RS24970 +0.6 2.0 chemoreceptor glutamine deamidase CheD compare
PFLU_RS03025 +0.6 2.3 tRNA dihydrouridine synthase DusB compare
PFLU_RS12515 +0.6 2.4 Lrp/AsnC family transcriptional regulator compare
PFLU_RS13750 +0.6 1.1 hypothetical protein compare
PFLU_RS31315 +0.6 1.9 hypothetical protein compare
PFLU_RS21860 +0.6 2.3 flagellar basal body rod protein FlgF compare
PFLU_RS00530 +0.6 0.7 DUF2388 domain-containing protein compare
PFLU_RS04200 +0.6 4.5 cytochrome bc complex cytochrome b subunit compare
PFLU_RS00040 +0.6 4.4 1-acyl-sn-glycerol-3-phosphate acyltransferase compare
PFLU_RS17015 +0.6 2.6 DUF1289 domain-containing protein compare
PFLU_RS07235 +0.6 1.8 sigma factor AlgU negative regulatory protein compare
PFLU_RS12430 +0.6 2.3 type II toxin-antitoxin system HicA family toxin compare
PFLU_RS28000 +0.6 3.4 TldD/PmbA family protein compare
PFLU_RS08660 +0.6 1.0 heme exporter protein CcmD compare
PFLU_RS12210 +0.6 1.9 hypothetical protein compare
PFLU_RS29815 +0.6 1.5 aspartate ammonia-lyase compare
PFLU_RS10200 +0.6 2.2 DUF4174 domain-containing protein compare
PFLU_RS23175 +0.6 2.7 flagellar basal body rod protein FlgC compare
PFLU_RS31150 +0.6 1.9 hypothetical protein compare
PFLU_RS30290 +0.6 2.0 hypothetical protein compare
PFLU_RS21725 +0.6 3.4 flagellar motor switch protein FliM compare
PFLU_RS28400 +0.6 2.1 RdgB/HAM1 family non-canonical purine NTP pyrophosphatase compare
PFLU_RS27305 +0.6 3.5 anhydro-N-acetylmuramic acid kinase compare
PFLU_RS10030 +0.6 2.7 metal ABC transporter permease compare
PFLU_RS27705 +0.6 2.4 RNA polymerase sigma factor compare
PFLU_RS02575 +0.6 3.7 GTPase HflX compare
PFLU_RS03600 +0.6 1.7 hypothetical protein compare
PFLU_RS14775 +0.6 1.0 enoyl-CoA hydratase compare
PFLU_RS17045 +0.6 2.3 SDR family oxidoreductase compare
PFLU_RS00865 +0.6 3.3 hypothetical protein compare
PFLU_RS08465 +0.6 2.3 DUF1127 domain-containing protein compare
PFLU_RS08490 +0.6 0.8 DEAD/DEAH box helicase compare
PFLU_RS13300 +0.5 1.8 DNA-directed RNA polymerase sigma-70 factor compare
PFLU_RS13585 +0.5 1.8 DNA-binding protein compare
PFLU_RS21850 +0.5 4.0 flagellar basal body L-ring protein FlgH compare
PFLU_RS09075 +0.5 2.1 hotdog fold thioesterase compare
PFLU_RS15275 +0.5 1.4 hypothetical protein compare
PFLU_RS04490 +0.5 2.1 hypoxanthine-guanine phosphoribosyltransferase compare
PFLU_RS00405 +0.5 2.4 cytochrome c5 family protein compare
PFLU_RS21730 +0.5 3.4 flagellar basal body-associated protein FliL compare
PFLU_RS21635 +0.5 2.6 flagellar motor protein compare
PFLU_RS20185 +0.5 1.4 hypothetical protein compare
PFLU_RS28270 +0.5 0.8 triphosphoribosyl-dephospho-CoA synthase compare
PFLU_RS31510 +0.5 1.1 transcriptional regulator compare
PFLU_RS06250 +0.5 1.8 ArsC family reductase compare
PFLU_RS25125 +0.5 3.6 biliverdin-producing heme oxygenase compare
PFLU_RS07545 +0.5 2.5 DUF2937 family protein compare
PFLU_RS01065 +0.5 1.8 biopolymer transporter ExbD compare
PFLU_RS03960 +0.5 1.4 tRNA-Thr compare
PFLU_RS11675 +0.5 2.1 glutathione S-transferase family protein compare
PFLU_RS12725 +0.5 1.3 GNAT family N-acetyltransferase compare
PFLU_RS17685 +0.5 1.6 GNAT family N-acetyltransferase compare
PFLU_RS29375 +0.5 1.6 RidA family protein compare


Specific Phenotypes

For 6 genes in this experiment

For stress D-Glucose in Pseudomonas fluorescens SBW25-INTG

For stress D-Glucose across organisms