Experiment set14IT032 for Klebsiella michiganensis M5al

Compare to:

RCH2_defined_noCarbon with Mixed culture; Escherichia coli BW25113 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x

200 most important genes:

  gene name fitness t score description  
BWI76_RS18930 -8.9 -5.4 histidinol-phosphate transaminase compare
BWI76_RS18935 -6.3 -8.8 bifunctional imidazole glycerol-phosphate dehydratase/histidinol phosphatase compare
BWI76_RS18950 -6.0 -5.3 imidazole glycerol phosphate synthase cyclase subunit compare
BWI76_RS18925 -5.6 -8.1 histidinol dehydrogenase compare
BWI76_RS20355 -5.4 -3.5 colicin V production protein compare
BWI76_RS18940 -5.3 -6.2 imidazole glycerol phosphate synthase subunit HisH compare
BWI76_RS00850 -5.2 -10.9 acetylglutamate kinase compare
BWI76_RS18955 -5.1 -4.4 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase compare
BWI76_RS23220 -5.0 -10.4 amino-acid N-acetyltransferase compare
BWI76_RS00855 -4.9 -10.0 argininosuccinate lyase compare
BWI76_RS04470 -4.8 -9.3 carbamoyl phosphate synthase large subunit compare
BWI76_RS26460 -4.8 -3.3 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
BWI76_RS21265 -4.7 -16.7 phosphoribosylformylglycinamidine synthase compare
BWI76_RS10990 -4.7 -2.4 dihydroorotase compare
BWI76_RS01615 -4.7 -10.8 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase compare
BWI76_RS01610 -4.6 -10.1 phosphoribosylamine--glycine ligase compare
BWI76_RS17975 -4.6 -5.4 tail-specific protease compare
BWI76_RS20350 -4.5 -7.8 amidophosphoribosyltransferase compare
BWI76_RS08385 -4.5 -3.9 citrate (Si)-synthase compare
BWI76_RS04255 -4.4 -8.2 threonine synthase compare
BWI76_RS07070 -4.4 -5.2 5-(carboxyamino)imidazole ribonucleotide mutase compare
BWI76_RS02995 -4.4 -7.2 aspartate carbamoyltransferase compare
BWI76_RS23265 -4.3 -2.1 hypothetical protein compare
BWI76_RS00805 -4.3 -4.5 5,10-methylenetetrahydrofolate reductase compare
BWI76_RS04245 -4.2 -17.6 bifunctional aspartate kinase/homoserine dehydrogenase I compare
BWI76_RS00835 -4.2 -14.5 phosphoenolpyruvate carboxylase compare
BWI76_RS00845 -4.2 -12.3 N-acetyl-gamma-glutamyl-phosphate reductase compare
BWI76_RS11965 -4.1 -6.1 orotidine-5'-phosphate decarboxylase compare
BWI76_RS09760 -4.1 -2.8 3-phosphoshikimate 1-carboxyvinyltransferase compare
BWI76_RS25115 -4.0 -10.9 argininosuccinate synthase compare
BWI76_RS04250 -4.0 -8.4 homoserine kinase compare
BWI76_RS27385 -4.0 -9.1 orotate phosphoribosyltransferase compare
BWI76_RS11840 -3.9 -7.5 tryptophan synthase subunit alpha compare
BWI76_RS00975 -3.9 -18.1 dihydroxy-acid dehydratase compare
BWI76_RS18920 -3.9 -3.9 ATP phosphoribosyltransferase compare
BWI76_RS12070 -3.8 -1.4 hypothetical protein compare
BWI76_RS03010 -3.8 -11.1 ornithine carbamoyltransferase compare
BWI76_RS20965 -3.8 -4.6 phosphoribosylformylglycinamidine cyclo-ligase compare
BWI76_RS27390 -3.8 -6.0 ribonuclease PH compare
BWI76_RS26455 -3.7 -2.3 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase compare
BWI76_RS01095 -3.7 -3.0 UDP-N-acetyl-D-mannosamine dehydrogenase compare
BWI76_RS09910 -3.7 -13.8 dihydroorotate dehydrogenase (quinone) compare
BWI76_RS11850 -3.7 -8.3 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase compare
BWI76_RS07065 -3.6 -7.5 5-(carboxyamino)imidazole ribonucleotide synthase compare
BWI76_RS04465 -3.6 -6.1 carbamoyl-phosphate synthase small subunit compare
BWI76_RS16965 -3.6 -3.1 murein lipoprotein compare
BWI76_RS22755 -3.6 -4.2 phosphoadenosine phosphosulfate reductase compare
BWI76_RS25645 -3.6 -5.4 shikimate dehydrogenase compare
BWI76_RS04240 -3.6 -1.3 thr operon leader peptide compare
BWI76_RS25335 -3.6 -2.2 stringent starvation protein A compare
BWI76_RS21475 -3.6 -3.4 bifunctional chorismate mutase/prephenate dehydrogenase compare
BWI76_RS25870 -3.5 -1.8 elongation factor Tu compare
BWI76_RS05840 -3.4 -3.3 glutamate 5-kinase compare
BWI76_RS05835 -3.4 -2.3 gamma-glutamyl-phosphate reductase compare
BWI76_RS00980 -3.4 -14.0 PLP-dependent threonine dehydratase compare
BWI76_RS22765 -3.3 -10.6 sulfite reductase subunit alpha compare
BWI76_RS00990 -3.3 -9.9 ketol-acid reductoisomerase compare
BWI76_RS14320 -3.3 -2.2 hypothetical protein compare
BWI76_RS21465 -3.2 -4.6 bifunctional chorismate mutase/prephenate dehydratase compare
BWI76_RS26390 -3.2 -9.3 cell division protein FtsX compare
BWI76_RS11845 -3.2 -2.5 tryptophan synthase subunit beta compare
BWI76_RS26000 -3.1 -8.2 aspartate aminotransferase family protein compare
BWI76_RS07465 -3.1 -1.5 TetR family transcriptional regulator compare
BWI76_RS01655 -3.1 -12.7 homoserine O-succinyltransferase compare
BWI76_RS22805 -3.0 -9.6 GTP diphosphokinase compare
BWI76_RS00965 -3.0 -1.0 acetolactate synthase 2 small subunit compare
BWI76_RS23920 -2.9 -2.8 D-3-phosphoglycerate dehydrogenase compare
BWI76_RS02815 -2.9 -2.4 fructose-bisphosphatase class I compare
BWI76_RS04665 -2.9 -19.6 3-isopropylmalate dehydratase small subunit compare
BWI76_RS22760 -2.9 -5.7 sulfite reductase subunit beta compare
BWI76_RS08535 -2.9 -1.7 translocation protein TolB compare
BWI76_RS01350 -2.9 -1.0 NAD(P)H-flavin reductase compare
BWI76_RS01800 -2.8 -2.0 glucose-6-phosphate isomerase compare
BWI76_RS23365 -2.8 -3.9 LysR family transcriptional regulator compare
BWI76_RS21580 -2.8 -1.7 SsrA-binding protein compare
BWI76_RS00785 -2.8 -6.9 cystathionine gamma-synthase compare
BWI76_RS08210 -2.8 -1.4 N-acetylglucosamine-6-phosphate deacetylase compare
BWI76_RS15825 -2.8 -1.3 hypothetical protein compare
BWI76_RS08520 -2.7 -2.1 colicin transporter TolQ compare
BWI76_RS20895 -2.7 -4.2 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
BWI76_RS05015 -2.7 -2.5 transcriptional regulator compare
BWI76_RS26620 -2.7 -0.9 Fe-S biogenesis protein NfuA compare
BWI76_RS06535 -2.7 -2.6 endopeptidase La compare
BWI76_RS08530 -2.7 -1.7 protein TolA compare
BWI76_RS04670 -2.7 -10.6 3-isopropylmalate dehydratase large subunit compare
BWI76_RS05120 -2.7 -6.2 bifunctional glycosyl transferase/transpeptidase compare
BWI76_RS09645 -2.7 -0.9 thioredoxin-disulfide reductase compare
BWI76_RS04675 -2.7 -6.0 3-isopropylmalate dehydrogenase compare
BWI76_RS17980 -2.7 -4.2 RNA chaperone ProQ compare
BWI76_RS25060 -2.6 -5.8 lipoprotein NlpI compare
BWI76_RS04525 -2.6 -2.1 4-hydroxythreonine-4-phosphate dehydrogenase PdxA compare
BWI76_RS26395 -2.6 -6.3 cell division protein FtsE compare
BWI76_RS16200 -2.5 -2.0 NAD(P) transhydrogenase subunit beta compare
BWI76_RS04270 -2.5 -5.4 transaldolase compare
BWI76_RS20490 -2.5 -2.4 hypothetical protein compare
BWI76_RS27425 -2.5 -1.7 DNA-directed RNA polymerase subunit omega compare
BWI76_RS21370 -2.5 -1.2 ATP-dependent RNA helicase SrmB compare
BWI76_RS08525 -2.5 -2.4 colicin transporter compare
BWI76_RS22690 -2.4 -2.3 adenylyl-sulfate kinase compare
BWI76_RS24285 -2.4 -9.1 cystathionine beta-lyase compare
BWI76_RS00345 -2.4 -3.9 protein disulfide oxidoreductase DsbA compare
BWI76_RS04680 -2.4 -9.2 2-isopropylmalate synthase compare
BWI76_RS11860 -2.4 -6.4 anthranilate synthase component I compare
BWI76_RS26665 -2.3 -4.0 DNA-binding response regulator compare
BWI76_RS20150 -2.3 -2.8 NADH:ubiquinone oxidoreductase subunit J compare
BWI76_RS09755 -2.3 -2.6 phosphoserine transaminase compare
BWI76_RS05260 -2.2 -1.5 chaperone compare
BWI76_RS24600 -2.2 -2.1 dihydroxyacetone kinase compare
BWI76_RS19870 -2.2 -3.5 malate:quinone oxidoreductase compare
BWI76_RS08020 -2.1 -6.3 serine-type D-Ala-D-Ala carboxypeptidase compare
BWI76_RS02775 -2.1 -4.7 outer membrane protein assembly factor compare
BWI76_RS04685 -2.1 -6.3 putative leucine operon leader peptide compare
BWI76_RS02530 -2.1 -1.4 tRNA dimethylallyltransferase compare
BWI76_RS09870 -2.1 -4.7 aromatic amino acid aminotransferase compare
BWI76_RS09670 -2.1 -3.9 recombination factor protein RarA compare
BWI76_RS09190 -2.1 -1.4 hypothetical protein compare
BWI76_RS23885 -2.1 -1.0 2-octaprenylphenol hydroxylase compare
BWI76_RS19840 -2.1 -0.7 hypothetical protein compare
BWI76_RS25065 -2.0 -4.6 polyribonucleotide nucleotidyltransferase compare
BWI76_RS01080 -2.0 -8.3 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase compare
BWI76_RS09825 -2.0 -5.7 envelope biogenesis factor ElyC compare
BWI76_RS21070 -2.0 -1.7 outer membrane protein assembly factor BamB compare
BWI76_RS17290 -2.0 -4.2 formyltetrahydrofolate deformylase compare
BWI76_RS25960 -2.0 -3.6 NUDIX hydrolase compare
BWI76_RS14300 -2.0 -3.3 hypothetical protein compare
BWI76_RS00985 -1.9 -6.1 transcriptional regulator IlvY compare
BWI76_RS26055 -1.9 -7.6 siroheme synthase compare
BWI76_RS23360 -1.9 -1.8 diaminopimelate decarboxylase compare
BWI76_RS06680 -1.9 -1.3 hypothetical protein compare
BWI76_RS25315 -1.9 -11.6 glutamate synthase large subunit compare
BWI76_RS09970 -1.9 -1.1 porin OmpA compare
BWI76_RS14305 -1.8 -4.6 metallophosphoesterase compare
BWI76_RS00180 -1.8 -0.9 F0F1 ATP synthase subunit epsilon compare
BWI76_RS11855 -1.8 -5.2 bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase compare
BWI76_RS14065 -1.8 -1.8 hypothetical protein compare
BWI76_RS15360 -1.8 -3.1 hypothetical protein compare
BWI76_RS01630 -1.8 -1.2 16S ribosomal RNA compare
BWI76_RS15690 -1.8 -3.5 hypothetical protein compare
BWI76_RS16275 -1.8 -3.5 fumarate hydratase FumA compare
BWI76_RS08395 -1.8 -1.9 succinate dehydrogenase cytochrome b556 large subunit compare
BWI76_RS11300 -1.8 -1.0 cupin compare
BWI76_RS11205 -1.8 -4.3 transcription-repair coupling factor compare
BWI76_RS20440 -1.8 -2.8 50S ribosomal protein L3 N(5)-glutamine methyltransferase compare
BWI76_RS04305 -1.8 -1.2 molecular chaperone DnaJ compare
BWI76_RS09655 -1.8 -4.6 leucine-responsive regulatory protein compare
BWI76_RS27440 -1.8 -1.2 DNA helicase RecG compare
BWI76_RS00240 -1.8 -1.5 FMN-binding protein MioC compare
BWI76_RS01220 -1.7 -5.1 DNA-dependent helicase II compare
BWI76_RS19905 -1.7 -4.3 OmpK36 porin compare
BWI76_RS25320 -1.7 -7.1 glutamate synthase compare
BWI76_RS24740 -1.7 -2.7 GntR family transcriptional regulator compare
BWI76_RS19615 -1.7 -3.5 vancomycin high temperature exclusion protein compare
BWI76_RS24900 -1.7 -1.1 DeoR family transcriptional regulator compare
BWI76_RS13160 -1.7 -1.9 azoreductase compare
BWI76_RS04715 -1.7 -2.0 division/cell wall cluster transcriptional repressor MraZ compare
BWI76_RS15115 -1.7 -1.2 MFS transporter compare
BWI76_RS21480 -1.7 -5.2 phospho-2-dehydro-3-deoxyheptonate aldolase compare
BWI76_RS24605 -1.7 -4.9 dihydroxyacetone kinase subunit DhaM compare
BWI76_RS13820 -1.7 -2.0 hypothetical protein compare
BWI76_RS01115 -1.6 -2.3 dTDP-4-amino-4,6-dideoxygalactose transaminase compare
BWI76_RS05915 -1.6 -2.9 helix-turn-helix transcriptional regulator compare
BWI76_RS23490 -1.6 -4.5 fimbrial protein compare
BWI76_RS04645 -1.6 -2.8 3-dehydroquinase compare
BWI76_RS21310 -1.6 -1.3 DNA repair protein RecO compare
BWI76_RS15110 -1.6 -3.8 putative excinuclease ABC subunit A compare
BWI76_RS10935 -1.6 -3.4 glucan biosynthesis glucosyltransferase H compare
BWI76_RS01135 -1.6 -3.4 lipopolysaccharide N-acetylmannosaminouronosyltransferase compare
BWI76_RS07185 -1.6 -1.0 hypothetical protein compare
BWI76_RS21560 -1.6 -4.3 DNA repair protein RecN compare
BWI76_RS09335 -1.6 -1.2 baseplate assembly protein W compare
BWI76_RS24580 -1.6 -3.8 PTS-dependent dihydroxyacetone kinase operon transcriptional regulator DhaR compare
BWI76_RS10930 -1.6 -7.0 glucan biosynthesis protein G compare
BWI76_RS19770 -1.5 -1.7 bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase compare
BWI76_RS11110 -1.5 -2.0 cell division protein YceG compare
BWI76_RS00390 -1.5 -6.4 two-component system sensor histidine kinase NtrB compare
BWI76_RS15760 -1.5 -1.9 hypothetical protein compare
BWI76_RS24595 -1.5 -2.4 dihydroxyacetone kinase subunit DhaK compare
BWI76_RS16425 -1.5 -3.1 hypothetical protein compare
BWI76_RS05450 -1.5 -0.7 ribonuclease HI compare
BWI76_RS26570 -1.5 -1.0 anion permease compare
BWI76_RS00715 -1.5 -1.0 two-component sensor histidine kinase compare
BWI76_RS00960 -1.4 -4.2 acetolactate synthase 2 catalytic subunit compare
BWI76_RS00875 -1.4 -2.9 DNA-binding transcriptional regulator FabR compare
BWI76_RS20380 -1.4 -0.7 tRNA pseudouridine(38-40) synthase TruA compare
BWI76_RS08500 -1.4 -2.2 cytochrome d ubiquinol oxidase subunit 2 compare
BWI76_RS17720 -1.4 -0.5 muramoyltetrapeptide carboxypeptidase compare
BWI76_RS23480 -1.4 -10.9 EAL domain-containing protein compare
BWI76_RS01185 -1.4 -0.9 adenylate cyclase compare
BWI76_RS15535 -1.4 -2.6 hypothetical protein compare
BWI76_RS21345 -1.4 -2.1 sigma-E factor regulatory protein RseB compare
BWI76_RS16480 -1.4 -2.1 lactoylglutathione lyase compare
BWI76_RS01090 -1.3 -4.4 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) compare
BWI76_RS11155 -1.3 -2.2 penicillin-binding protein activator LpoB compare
BWI76_RS13775 -1.3 -2.8 putative FMN-dependent luciferase-like monooxygenase compare
BWI76_RS09625 -1.3 -1.0 hypothetical protein compare
BWI76_RS12270 -1.3 -3.0 hypothetical protein compare
BWI76_RS12170 -1.3 -2.4 hypothetical protein compare
BWI76_RS00400 -1.3 -0.7 glutamine synthetase compare
BWI76_RS18000 -1.3 -2.8 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF compare
BWI76_RS01125 -1.3 -3.1 4-alpha-L-fucosyltransferase compare


Specific Phenotypes

None in this experiment

For Klebsiella michiganensis M5al in mixed community experiments

For mixed community Mixed culture; Escherichia coli BW25113 3:1 starting OD to Klebsiella across organisms