Experiment set14IT032 for Klebsiella michiganensis M5al

Compare to:

RCH2_defined_noCarbon with Mixed culture; Escherichia coli BW25113 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x

200 most detrimental genes:

  gene name fitness t score description  
BWI76_RS02745 +1.8 2.9 hypothetical protein compare
BWI76_RS26185 +1.5 0.9 thiosulfate sulfurtransferase compare
BWI76_RS15975 +1.4 1.5 hypothetical protein compare
BWI76_RS05235 +1.3 1.6 hypothetical protein compare
BWI76_RS14670 +1.3 2.6 hypothetical protein compare
BWI76_RS03045 +1.3 2.7 hypothetical protein compare
BWI76_RS23895 +1.3 1.5 Xaa-Pro aminopeptidase compare
BWI76_RS15215 +1.2 1.3 N-acetyltransferase compare
BWI76_RS14805 +1.2 3.4 hypothetical protein compare
BWI76_RS14775 +1.2 3.1 creatinine amidohydrolase compare
BWI76_RS26805 +1.1 3.0 cellulose biosynthesis protein BcsF compare
BWI76_RS16760 +1.1 3.8 lipase compare
BWI76_RS20900 +1.1 1.5 outer membrane protein assembly factor BamC compare
BWI76_RS08765 +1.1 2.5 8-amino-7-oxononanoate synthase compare
BWI76_RS12790 +1.0 1.2 lactate dehydrogenase compare
BWI76_RS08380 +1.0 1.2 endonuclease VIII compare
BWI76_RS11675 +1.0 3.0 arginine N-succinyltransferase compare
BWI76_RS14725 +1.0 1.4 HxlR family transcriptional regulator compare
BWI76_RS20155 +1.0 1.9 NADH-quinone oxidoreductase subunit I compare
BWI76_RS14825 +1.0 2.4 dienelactone hydrolase family protein compare
BWI76_RS19330 +1.0 1.0 HAD family hydrolase compare
BWI76_RS16695 +1.0 5.3 dipeptide/oligopeptide/nickel ABC transporter ATP-binding protein compare
BWI76_RS14970 +1.0 1.8 pyrroline-5-carboxylate reductase compare
BWI76_RS07740 +1.0 1.5 Fe2+-enterobactin ABC transporter substrate-binding protein compare
BWI76_RS19310 +0.9 3.4 ABC transporter permease compare
BWI76_RS14780 +0.9 2.9 phosphotriesterase compare
BWI76_RS23195 +0.9 2.7 ethanolamine utilization protein EutP compare
BWI76_RS15980 +0.9 2.6 lysine transporter LysE compare
BWI76_RS19480 +0.9 4.0 transcriptional regulator compare
BWI76_RS03595 +0.9 2.1 ethanolamine utilization protein EutM compare
BWI76_RS07725 +0.9 1.3 iron-enterobactin transporter permease compare
BWI76_RS19935 +0.9 1.6 hypothetical protein compare
BWI76_RS16015 +0.9 2.4 pheromone autoinducer 2 transporter compare
BWI76_RS23030 +0.9 2.2 cobalamin biosynthesis protein CbiM compare
BWI76_RS24080 +0.9 2.2 DUF179 domain-containing protein compare
BWI76_RS21675 +0.8 0.7 hypothetical protein compare
BWI76_RS11680 +0.8 2.2 succinylglutamate-semialdehyde dehydrogenase compare
BWI76_RS14435 +0.8 1.6 glutamine ABC transporter ATP-binding protein compare
BWI76_RS05880 +0.8 0.9 AraC-type DNA-binding domain-containing protein compare
BWI76_RS04095 +0.8 2.7 dUMP phosphatase compare
BWI76_RS12520 +0.8 3.3 hypothetical protein compare
BWI76_RS06190 +0.8 2.5 hypothetical protein compare
BWI76_RS07255 +0.8 1.7 hypothetical protein compare
BWI76_RS02050 +0.8 1.2 CidA/LrgA family protein compare
BWI76_RS08585 +0.8 1.5 nicotinamide riboside transporter PnuC compare
BWI76_RS20795 +0.8 1.4 ethanolamine catabolic microcompartment shell protein EutN compare
BWI76_RS18360 +0.8 1.3 aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase family protein compare
BWI76_RS18225 +0.8 3.1 universal stress protein C compare
BWI76_RS26405 +0.8 1.5 16S rRNA (guanine(966)-N(2))-methyltransferase compare
BWI76_RS17085 +0.8 2.1 hypothetical protein compare
BWI76_RS26285 +0.8 2.8 glycerophosphodiester phosphodiesterase compare
BWI76_RS20375 +0.8 1.2 membrane protein compare
BWI76_RS17375 +0.8 1.9 nitrate ABC transporter, permease protein compare
BWI76_RS12055 +0.8 2.0 DNA single-strand annealing protein RecT-like protein compare
BWI76_RS11790 +0.8 2.1 acyl-CoA thioesterase compare
BWI76_RS14980 +0.8 0.9 hypothetical protein compare
BWI76_RS06335 +0.8 2.6 nucleoside-specific channel-forming protein Tsx compare
BWI76_RS16160 +0.8 1.9 LysR family transcriptional regulator compare
BWI76_RS15950 +0.8 1.5 dethiobiotin synthase compare
BWI76_RS20800 +0.8 2.2 carboxysome shell protein compare
BWI76_RS07985 +0.8 0.9 fluoride ion transporter CrcB compare
BWI76_RS15285 +0.8 2.3 stress protection protein MarC compare
BWI76_RS19750 +0.8 2.8 elongation factor P-like protein YeiP compare
BWI76_RS07475 +0.8 1.4 DNA-binding transcriptional regulator RamA compare
BWI76_RS18065 +0.8 1.3 DNA polymerase III subunit theta compare
BWI76_RS11755 +0.7 3.1 catalase HPII compare
BWI76_RS00505 +0.7 3.5 PTS system, sorbose-specific IIB component compare
BWI76_RS01815 +0.7 1.8 phosphate-starvation-inducible protein PsiE compare
BWI76_RS15015 +0.7 1.0 DUF2132 domain-containing protein compare
BWI76_RS10755 +0.7 1.3 pyrimidine utilization flavin reductase protein F compare
BWI76_RS25980 +0.7 2.3 hypothetical protein compare
BWI76_RS05800 +0.7 2.0 phage transcriptional activator, Ogr/delta compare
BWI76_RS06400 +0.7 1.7 oxidative-stress-resistance chaperone compare
BWI76_RS02800 +0.7 2.8 ABC transporter compare
BWI76_RS12825 +0.7 2.1 hypothetical protein compare
BWI76_RS14930 +0.7 1.7 hypothetical protein compare
BWI76_RS23340 +0.7 2.1 transcriptional regulator compare
BWI76_RS07545 +0.7 3.9 amidase compare
BWI76_RS08835 +0.7 3.0 molybdopterin guanine dinucleotide biosynthesis protein MoaE compare
BWI76_RS04600 +0.7 2.9 inner membrane protein compare
BWI76_RS27760 +0.7 1.2 lactam utilization protein LamB compare
BWI76_RS18675 +0.7 2.1 fimbrial protein compare
BWI76_RS03105 +0.7 0.8 myo-inosose-2 dehydratase compare
BWI76_RS20765 +0.7 2.8 ethanolamine ammonia lyase large subunit compare
BWI76_RS20675 +0.7 1.9 GMP synthase compare
BWI76_RS22280 +0.7 2.8 formate dehydrogenase-H ferredoxin subunit compare
BWI76_RS13400 +0.7 2.2 GntR family transcriptional regulator compare
BWI76_RS19135 +0.7 4.3 molecular chaperone compare
BWI76_RS20925 +0.7 2.4 peptidase M48 compare
BWI76_RS00140 +0.7 1.1 phosphate transport system regulator PhoU compare
BWI76_RS16170 +0.7 4.6 amidohydrolase compare
BWI76_RS06015 +0.7 1.4 hypothetical protein compare
BWI76_RS22435 +0.7 3.0 iron ABC transporter permease AfeC compare
BWI76_RS15915 +0.7 3.6 YnfC family lipoprotein compare
BWI76_RS24810 +0.7 2.2 hypothetical protein compare
BWI76_RS10530 +0.7 1.7 GntR family transcriptional regulator with compare
BWI76_RS18390 +0.7 1.6 hypothetical protein compare
BWI76_RS11235 +0.7 1.2 hypothetical protein compare
BWI76_RS19530 +0.7 2.4 YIP1 family protein compare
BWI76_RS11950 +0.7 2.6 phosphatidylglycerophosphatase B compare
BWI76_RS15940 +0.7 0.7 DMSO reductase maturation protein DsmD compare
BWI76_RS01195 +0.7 1.0 membrane protein compare
BWI76_RS16915 +0.6 1.6 alpha/beta hydrolase fold protein compare
BWI76_RS16870 +0.6 2.6 LysR family transcriptional regulator compare
BWI76_RS12670 +0.6 0.8 DNA polymerase V subunit UmuD compare
BWI76_RS19220 +0.6 1.6 hypothetical protein compare
BWI76_RS15090 +0.6 2.2 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase compare
BWI76_RS07780 +0.6 0.9 hypothetical protein compare
BWI76_RS23025 +0.6 2.4 cobalt ABC transporter substrate-binding protein CbiN compare
BWI76_RS21390 +0.6 2.1 thiol disulfide reductase thioredoxin compare
BWI76_RS07860 +0.6 2.0 cytosine permease compare
BWI76_RS13090 +0.6 1.6 phenylacetate-CoA oxygenase subunit PaaA compare
BWI76_RS20050 +0.6 1.4 hypothetical protein compare
BWI76_RS18090 +0.6 1.4 phosphoribosylglycinamide formyltransferase 2 compare
BWI76_RS17765 +0.6 1.8 hypothetical protein compare
BWI76_RS16025 +0.6 1.7 triphosphoribosyl-dephospho-CoA synthase compare
BWI76_RS10725 +0.6 2.2 hypothetical protein compare
BWI76_RS10270 +0.6 3.6 acetylornithine deacetylase compare
BWI76_RS25375 +0.6 1.8 hypothetical protein compare
BWI76_RS15300 +0.6 1.9 multiple antibiotic resistance regulatory periplasmic protein MarB compare
BWI76_RS15985 +0.6 1.9 LysR family transcriptional regulator compare
BWI76_RS09135 +0.6 1.5 oxidoreductase compare
BWI76_RS16750 +0.6 3.6 acetolactate synthase compare
BWI76_RS11645 +0.6 3.5 ABC transporter substrate-binding protein compare
BWI76_RS03015 +0.6 2.2 RNase E inhibitor protein compare
BWI76_RS07025 +0.6 2.9 glycerate kinase II compare
BWI76_RS22860 +0.6 1.8 SecY-interacting protein compare
BWI76_RS26140 +0.6 1.6 GMP/IMP nucleotidase compare
BWI76_RS12485 +0.6 1.3 TyrR family transcriptional regulator compare
BWI76_RS20940 +0.6 2.1 uracil/xanthine transporter compare
BWI76_RS16655 +0.6 1.6 CatA-like O-acetyltransferase compare
BWI76_RS21185 +0.6 2.1 hypothetical protein compare
BWI76_RS18580 +0.6 1.4 hypothetical protein compare
BWI76_RS11515 +0.6 1.0 peptide-methionine (R)-S-oxide reductase compare
BWI76_RS04805 +0.6 1.7 8-oxo-dGTP diphosphatase compare
BWI76_RS14750 +0.6 2.1 transcriptional regulator compare
BWI76_RS23250 +0.6 1.2 hypothetical protein compare
BWI76_RS01740 +0.6 3.4 PTS enzyme IIAB, mannose-specific compare
BWI76_RS19710 +0.6 2.5 NupC/NupG family nucleoside CNT transporter compare
BWI76_RS01995 +0.6 1.1 AraC family transcriptional regulator compare
BWI76_RS19700 +0.6 1.2 deoxyribonuclease IV compare
BWI76_RS24010 +0.6 3.6 hypothetical protein compare
BWI76_RS12875 +0.6 1.3 bifunctional deaminase-reductase compare
BWI76_RS19890 +0.6 3.0 alpha-ketoglutarate-dependent dioxygenase AlkB compare
BWI76_RS24925 +0.6 2.5 DnaA initiator-associating protein DiaA compare
BWI76_RS24035 +0.6 2.1 hypothetical protein compare
BWI76_RS01585 +0.6 2.3 transcriptional regulator compare
BWI76_RS14965 +0.6 2.9 AraC family transcriptional regulator compare
BWI76_RS16880 +0.6 1.9 GlpE family protein compare
BWI76_RS07965 +0.6 1.3 anaerobic C4-dicarboxylate transporter DcuC compare
BWI76_RS20810 +0.6 1.5 ethanolamine utilization cobalamin adenosyltransferase compare
BWI76_RS05430 +0.6 2.6 UbiE/COQ5 family methyltransferase compare
BWI76_RS17945 +0.6 1.0 hypothetical protein compare
BWI76_RS22200 +0.6 2.3 iron ABC transporter compare
BWI76_RS20840 +0.6 2.3 hypothetical protein compare
BWI76_RS27395 +0.6 2.7 hypothetical protein compare
BWI76_RS22620 +0.6 2.4 3-octaprenyl-4-hydroxybenzoate carboxy-lyase compare
BWI76_RS13505 +0.6 2.2 putative receptor compare
BWI76_RS24155 +0.6 2.5 A/G-specific adenine glycosylase compare
BWI76_RS07895 +0.6 2.0 sugar ABC transporter ATPase compare
BWI76_RS15200 +0.6 2.3 glutaminase compare
BWI76_RS12780 +0.6 1.4 hypothetical protein compare
BWI76_RS17200 +0.6 1.5 hypothetical protein compare
BWI76_RS19375 +0.6 0.8 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase compare
BWI76_RS12550 +0.6 1.4 hypothetical protein compare
BWI76_RS02255 +0.6 1.3 chaperone-modulator protein CbpM compare
BWI76_RS01545 +0.6 1.5 thiamine biosynthesis protein ThiS compare
BWI76_RS14740 +0.6 1.3 LysR family transcriptional regulator compare
BWI76_RS07265 +0.6 2.2 ABC transporter ATP-binding protein compare
BWI76_RS14925 +0.6 1.7 ABC transporter substrate-binding protein compare
BWI76_RS20390 +0.6 1.3 erythronate-4-phosphate dehydrogenase compare
BWI76_RS26350 +0.6 2.2 branched chain amino acid ABC transporter substrate-binding protein compare
BWI76_RS23020 +0.6 1.0 cobalamin biosynthesis protein CbiQ compare
BWI76_RS06540 +0.6 1.6 DNA-binding protein HU-beta compare
BWI76_RS13980 +0.6 0.9 hypothetical protein compare
BWI76_RS24110 +0.6 1.3 YggU family protein compare
BWI76_RS22290 +0.6 4.6 PTS cellobiose/arbutin/salicin transporter subunit IIBC compare
BWI76_RS02720 +0.6 2.9 NAD(P)-dependent oxidoreductase compare
BWI76_RS15330 +0.6 2.0 urea ABC transporter permease subunit UrtC compare
BWI76_RS12865 +0.5 3.6 acetylornithine deacetylase compare
BWI76_RS09505 +0.5 0.9 arginine transporter permease subunit ArtM compare
BWI76_RS18335 +0.5 3.2 DNA-binding response regulator compare
BWI76_RS24140 +0.5 2.4 hypothetical protein compare
BWI76_RS18565 +0.5 1.4 pemk protein compare
BWI76_RS05010 +0.5 1.4 tRNA glutamyl-Q synthetase compare
BWI76_RS04915 +0.5 1.8 hypothetical protein compare
BWI76_RS05895 +0.5 1.9 phosphonate ABC transporter, permease protein PhnE compare
BWI76_RS00085 +0.5 1.9 hypothetical protein compare
BWI76_RS04990 +0.5 2.2 pantoate--beta-alanine ligase compare
BWI76_RS16670 +0.5 2.0 NLPA lipoprotein compare
BWI76_RS11865 +0.5 1.1 phosphatase compare
BWI76_RS11390 +0.5 1.3 iron dicitrate transport regulator FecR compare
BWI76_RS09040 +0.5 2.2 ABC-F family ATPase compare
BWI76_RS20430 +0.5 1.7 penicillin-insensitive murein endopeptidase compare
BWI76_RS16550 +0.5 1.9 tRNA-Val compare
BWI76_RS11810 +0.5 0.9 outer membrane protein OmpW compare
BWI76_RS00795 +0.5 1.0 carboxymuconolactone decarboxylase compare
BWI76_RS13260 +0.5 3.7 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase compare
BWI76_RS15970 +0.5 1.7 carboxypeptidase M32 compare
BWI76_RS19360 +0.5 1.7 glucose dehydrogenase compare


Specific Phenotypes

None in this experiment

For Klebsiella michiganensis M5al in mixed community experiments

For mixed community Mixed culture; Escherichia coli BW25113 3:1 starting OD to Klebsiella across organisms