Experiment set14IT031 for Sinorhizobium meliloti 1021

Compare to:

D-Glucose carbon source

200 most important genes:

  gene name fitness t score description  
SMc02572 -10.0 -6.4 imidazole glycerol phosphate synthase subunit HisH compare
SMc02766 -8.7 -10.3 tryptophan synthase subunit beta compare
SMc02899 -8.6 -6.0 prephenate dehydratase compare
SMc00236 -8.5 -5.9 Indole-3-glycerol phosphate synthase compare
SMc04405 -8.3 -5.8 3-isopropylmalate dehydrogenase compare
SMc02767 -8.1 -9.7 N-(5'-phosphoribosyl)anthranilate isomerase compare
SMc01494 -7.8 -11.9 phosphoserine phosphatase compare
SMc01054 -7.7 -5.3 required for sulfate utilization, putative electron source for sulfite reductase CysI (from data) compare
SMc02569 -7.6 -5.3 imidazole glycerol phosphate synthase subunit HisF compare
SMc01726 -7.6 -5.3 acetylglutamate kinase compare
SMc00917 -7.5 -5.2 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) compare
SMc00640 -7.5 -7.3 phosphoserine aminotransferase compare
SMc03797 -7.5 -12.5 homoserine O-succinyltransferase compare
SMc04045 -7.4 -7.2 dihydroxy-acid dehydratase compare
SMc00711 -7.3 -5.1 cyclohexadienyl dehydrogenase compare
SMc00235 -7.3 -8.7 anthranilate phosphoribosyltransferase compare
SMc04002 -7.2 -9.9 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
SMc01431 -7.2 -8.6 acetolactate synthase 3 catalytic subunit compare
SMc01843 -7.2 -12.0 5,10-methylenetetrahydrofolate reductase compare
SMc04026 -7.1 -9.8 glutamate synthase compare
SMc02717 -7.0 -11.7 2-isopropylmalate synthase compare
SMc04028 -6.8 -16.5 glutamate synthase compare
SMc03895 -6.7 -18.0 pyruvate carboxylase compare
SMc00993 -6.7 -10.3 phosphoribosylamine--glycine ligase compare
SMc00131 -6.6 -14.1 transcriptional regulator compare
SMc02245 -6.6 -6.4 dihydroorotate dehydrogenase 2 compare
SMc02725 -6.6 -13.4 anthranilate synthase compare
SMa1635 -6.5 -2.5 hypothetical protein compare
SMc03823 -6.5 -11.6 isopropylmalate isomerase large subunit compare
SMc03112 -6.5 -18.8 B12-dependent methionine synthase compare
SMc00918 -6.5 -10.8 ATP phosphoribosyltransferase regulatory subunit compare
SMc02765 -6.4 -11.9 tryptophan synthase subunit alpha compare
SMc00554 -6.4 -4.4 amidophosphoribosyltransferase compare
SMc00494 -6.3 -2.4 phosphoribosylformylglycinamidine synthase subunit PurS compare
SMc02123 -6.3 -4.2 required for sulfate utilization, putative electron transport protein for sulfite reductase (from data) compare
SMc00493 -6.2 -6.0 phosphoribosylformylglycinamidine synthase I compare
SMc02425 -6.2 -6.0 transcriptional regulator compare
SMc02137 -6.2 -4.2 ornithine carbamoyltransferase compare
SM_b21176 -6.2 -4.2 phosphate uptake ABC transporter substrate-binding protein precursor compare
SMc00615 -6.1 -7.0 phosphoribosylaminoimidazole synthetase compare
SMc00495 -6.0 -5.2 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
SMc00614 -6.0 -8.2 phosphoribosylglycinamide formyltransferase compare
SMc01801 -5.9 -3.9 N-acetylglutamylphosphate reductase (EC 1.2.1.38) (from data) compare
SMc03070 -5.9 -10.6 glucose-6-phosphate 1-dehydrogenase compare
SMc02755 -5.9 -7.0 S-adenosyl-L-homocysteine hydrolase compare
SMc00815 -5.9 -3.9 inosine 5'-monophosphate dehydrogenase compare
SMc00488 -5.7 -16.8 phosphoribosylformylglycinamidine synthase II compare
SMc03763 -5.7 -3.9 cytosine-specific methyltransferase compare
SMc01004 -5.6 -8.6 phosphoribosyl-AMP cyclohydrolase compare
SMc01360 -5.6 -3.8 aspartate carbamoyltransferase catalytic subunit compare
SMc03776 -5.5 -3.8 gamma-glutamyl kinase compare
SMc03777 -5.5 -10.5 gamma-glutamyl phosphate reductase compare
SMc00092 -5.4 -14.4 phosphoadenosine phosphosulfate reductase compare
SM_b21177 -5.3 -6.3 phosphate uptake ABC transporter ATP-binding protein compare
SMc01361 -5.2 -5.1 dihydroorotase compare
SMc04088 -5.1 -7.9 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
SMc00293 -5.1 -10.5 homoserine dehydrogenase compare
SMc02217 -5.1 -9.2 O-succinylhomoserine sulfhydrylase compare
SMc03229 -5.1 -3.3 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase compare
SMc02124 -5.1 -13.9 nitrite reductase compare
SMc04001 -5.1 -2.0 phosphoribosylaminoimidazole carboxylase catalytic subunit protein compare
SMc02307 -5.1 -9.7 histidinol dehydrogenase compare
SMc00412 -5.1 -4.9 orotidine 5'-phosphate decarboxylase compare
SMc02574 -4.9 -6.6 imidazoleglycerol-phosphate dehydratase compare
SMc01881 -4.9 -5.6 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
SMc00876 -4.8 -8.7 ATP-binding MRP protein compare
SMc02165 -4.8 -7.3 orotate phosphoribosyltransferase compare
SMc03979 -4.6 -4.4 glyceraldehyde-3-phosphate dehydrogenase compare
SMc00090 -4.5 -13.6 sulfate adenylyltransferase compare
SMc02570 -4.5 -5.1 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
SM_b21174 -4.4 -6.5 phosphate uptake ABC transporter permease compare
SMc01880 -4.4 -3.1 pantoate--beta-alanine ligase compare
SMc03795 -4.4 -2.4 isopropylmalate isomerase small subunit compare
SMc02138 -4.4 -7.5 acetylornithine transaminase compare
SMc03826 -4.4 -3.0 argininosuccinate synthase compare
SMc00091 -4.3 -13.7 sulfate adenylyltransferase compare
SMc02166 -4.3 -9.9 dihydroorotase compare
SM_b21175 -4.2 -5.1 phosphate uptake ABC transporter permease compare
SMc02246 -4.1 -1.6 hypothetical protein compare
SMc01053 -4.0 -5.1 siroheme synthase compare
SMc01770 -3.9 -1.6 serine hydroxymethyltransferase compare
SMc03978 -3.9 -2.7 transketolase compare
SMc00017 -3.8 -2.0 homoserine kinase compare
SMc03981 -3.6 -3.7 phosphoglycerate kinase compare
SMc04346 -3.6 -4.0 ketol-acid reductoisomerase compare
SMc02707 -3.5 -5.8 hypothetical protein compare
SMc03068 -3.4 -12.4 phosphogluconate dehydratase compare
SMc00294 -3.4 -12.0 aminotransferase compare
SMc01215 -3.4 -2.3 carbamoyl phosphate synthase large subunit compare
SMc04005 -3.3 -9.7 pyruvate kinase compare
SMc02835 -3.1 -7.8 glucokinase compare
SMc01430 -3.1 -5.1 acetolactate synthase 3 regulatory subunit compare
SMc00641 -3.0 -4.2 D-3-phosphoglycerate dehydrogenase compare
SMc01569 -3.0 -1.6 carbamoyl phosphate synthase small subunit compare
SMc02362 -2.9 -3.6 cytochrome c-type biogenesis protein CcmE compare
SMc03069 -2.9 -3.7 6-phosphogluconolactonase compare
SMc03924 -2.7 -10.2 glycogen synthase compare
SMc02140 -2.6 -3.4 phosphate regulon transcriptional regulatory protein compare
SMc01441 -2.5 -7.3 membrane bound protease compare
SM_b20902 -2.4 -12.0 sugar uptake ABC transporter substrate-binding protein precursor compare
SM_b20904 -2.4 -5.8 sugar uptake ABC transporter ATP-binding protein compare
SM_b20903 -2.4 -11.2 sugar uptake ABC transporter permease compare
SMc01124 -2.3 -7.8 PII uridylyl-transferase compare
SMc01842 -2.3 -2.5 methyltransferase transcription regulator protein compare
SMc02833 -2.2 -3.2 penicillin-insensitive murein endopeptidase compare
SMc01028 -2.0 -10.2 phosphopyruvate hydratase compare
SMc01578 -2.0 -8.7 aspartate aminotransferase compare
SMc01364 -1.9 -1.8 DNA topoisomerase I compare
SMc00492 -1.9 -1.2 hypothetical protein compare
SMc01440 -1.9 -6.2 hydrolase serine protease transmembrane protein compare
SMc01147 -1.9 -3.6 coproporphyrinogen III oxidase compare
SMc00982 -1.9 -6.7 dioxygenase compare
SMc01183 -1.8 -2.4 LexA repressor compare
SMa0789 -1.7 -4.3 GntR family transcriptional regulator compare
SMc03153 -1.7 -3.8 keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase compare
SMc00928 -1.7 -1.8 signal peptide protein compare
SMc02838 -1.7 -7.5 phosphoglyceromutase compare
SMc03100 -1.6 -0.9 hypothetical protein compare
SMc02983 -1.6 -5.3 ornithine, DAP, or arginine decarboxylase compare
SMc00073 -1.6 -2.7 hypothetical protein compare
SMc02495 -1.6 -2.8 translaldolase compare
SMc02058 -1.6 -2.4 YAJC protein compare
SMc00450 -1.6 -2.7 protoheme IX farnesyltransferase compare
SMc01852 -1.5 -7.3 pyrophosphate--fructose-6-phosphate 1-phosphotransferase compare
SMc01206 -1.5 -1.8 queuine tRNA-ribosyltransferase compare
SMc02141 -1.5 -4.6 phosphate transporter PhoU compare
SMc00302 -1.5 -3.9 hypothetical protein compare
SMc02147 -1.5 -7.3 phosphate regulon sensor histidine kinase transmembrane protein compare
SMa1700 -1.5 -2.0 hypothetical protein compare
SMc00914 -1.5 -4.1 oxidoreductase compare
SMc00619 -1.4 -1.6 hypothetical protein compare
SMc00709 -1.4 -3.8 hypothetical protein compare
SMc01207 -1.4 -2.7 S-adenosylmethionine--tRNA ribosyltransferase-isomerase compare
SMc03993 -1.4 -3.5 hypothetical protein compare
SMc04213 -1.3 -2.0 diacylglycerol kinase compare
SMc02144 -1.3 -3.7 phosphate ABC transporter permease compare
SMc01368 -1.3 -5.2 transport transmembrane protein compare
SMc03242 -1.3 -3.2 GTP-binding protein compare
SMc04085 -1.3 -3.3 hypothetical protein compare
SMc02719 -1.3 -1.2 transposase compare
SMc00414 -1.3 -9.1 hypothetical protein compare
SMc00981 -1.3 -5.3 ferredoxin protein compare
SMc02050 -1.2 -3.3 trigger factor compare
SMc02142 -1.2 -5.8 phosphate transporter ATP-binding protein compare
SMc01768 -1.2 -4.2 transcriptional regulator compare
SMc03980 -1.2 -5.1 hypothetical protein compare
SMc00405 -1.2 -6.3 hypothetical protein compare
SM_b20293 -1.2 -1.4 hypothetical protein compare
SMc00352 -1.2 -2.0 acetyltransferase compare
SMa0905 -1.2 -1.7 hypothetical protein compare
SMc02102 -1.2 -3.7 hypothetical protein compare
SMc02544 -1.1 -1.2 hypothetical protein compare
SMc01509 -1.1 -2.3 hypothetical protein compare
SMc01850 -1.1 -2.2 hypothetical protein compare
SMc01242 -1.1 -3.5 signal peptide protein compare
SMc00010 -1.1 -1.7 cytochrome C oxidase polypeptide I transmembrane protein compare
SM_b20258 -1.1 -3.0 transcriptional regulator compare
SMc01097 -1.1 -2.8 hypothetical protein compare
SMc00088 -1.1 -1.6 hypothetical protein compare
SMc04000 -1.1 -0.8 hypothetical protein compare
SMc02812 -1.1 -3.3 hypothetical protein compare
SMc03140 -1.0 -4.6 transcriptional regulator compare
SMc02640 -1.0 -2.4 UDP-glucuronic acid epimerase compare
SMc02451 -1.0 -1.4 hypothetical protein compare
SMc00513 -1.0 -4.6 amino acid-binding periplasmic protein compare
SMc01454 -1.0 -6.2 hypothetical protein compare
SMc02850 -1.0 -3.9 DNA polymerase I compare
SMc01833 -1.0 -2.0 hypothetical protein compare
SMa1323 -1.0 -2.8 Transcription regulator compare
SMc01043 -1.0 -5.4 nitrogen assimilation regulatory protein compare
SMa0955 -1.0 -1.4 GntR family transcriptional regulator compare
SMc02582 -1.0 -3.5 hypothetical protein compare
SMc03258 -1.0 -4.9 transcriptional regulator compare
SMc02677 -1.0 -4.8 pyrroline-5-carboxylate reductase compare
SMc01939 -0.9 -1.2 urease subunit beta compare
SM_b21096 -0.9 -1.2 amino acid transporter ABC transporter ATP-binding protein compare
SMc00295 -0.9 -1.0 hypothetical protein compare
SMc02434 -0.9 -1.9 hypothetical protein compare
SMc02121 -0.9 -1.4 ABC transporter for L-Glutamine, L-Histidine, and other L-amino acids, ATPase component (from data) compare
SM_b20148 -0.9 -4.1 transcriptional regulator compare
SMc01845 -0.9 -1.8 transglycosylase transmembrane protein compare
SMc01438 -0.9 -3.6 protease precursor signal peptide protein compare
SMc02460 -0.9 -4.9 hypothetical protein compare
SMc02114 -0.9 -1.9 hypothetical protein compare
SMc02115 -0.9 -1.0 hypothetical protein compare
SMa1442 -0.9 -4.1 GntR family transcriptional regulator compare
SMc02714 -0.9 -1.2 hypothetical protein compare
SMc00963 -0.9 -2.4 hypothetical protein compare
SMc02385 -0.8 -2.3 hypothetical protein compare
SMc00378 -0.8 -2.2 exodeoxyribonuclease VII large subunit compare
SMc00511 -0.8 -3.8 D-ribulose-5-phosphate 3-epimerase compare
SM_b20312 -0.8 -4.6 dihydroxyacetone kinase compare
SMc03046 -0.8 -3.1 transcriptional regulator compare
SMa0848 -0.8 -2.2 hypothetical protein compare
SMc02510 -0.8 -0.8 ferric uptake regulation protein compare
SMc04040 -0.8 -1.6 heat shock protein compare
SM_b20314 -0.8 -3.5 glycerone kinase compare
SM_b21598 -0.8 -3.5 transcriptional regulator compare
SMc01568 -0.8 -1.4 hypothetical protein compare
SMc00451 -0.8 -4.2 processing protease compare


Specific Phenotypes

None in this experiment

For Sinorhizobium meliloti 1021 in carbon source experiments

For carbon source D-Glucose across organisms