Experiment set14IT031 for Klebsiella michiganensis M5al

Compare to:

RCH2_defined_noCarbon with Mixed culture; Cupriavidus sp. AnTP704 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x

200 most important genes:

  gene name fitness t score description  
BWI76_RS18940 -6.5 -6.8 imidazole glycerol phosphate synthase subunit HisH compare
BWI76_RS04465 -6.0 -5.8 carbamoyl-phosphate synthase small subunit compare
BWI76_RS21465 -5.8 -6.9 bifunctional chorismate mutase/prephenate dehydratase compare
BWI76_RS18955 -5.7 -6.3 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase compare
BWI76_RS18930 -5.5 -6.0 histidinol-phosphate transaminase compare
BWI76_RS18950 -5.3 -4.3 imidazole glycerol phosphate synthase cyclase subunit compare
BWI76_RS20350 -5.2 -7.7 amidophosphoribosyltransferase compare
BWI76_RS07070 -5.1 -4.4 5-(carboxyamino)imidazole ribonucleotide mutase compare
BWI76_RS18935 -5.1 -11.7 bifunctional imidazole glycerol-phosphate dehydratase/histidinol phosphatase compare
BWI76_RS01610 -5.0 -11.6 phosphoribosylamine--glycine ligase compare
BWI76_RS00990 -4.9 -13.8 ketol-acid reductoisomerase compare
BWI76_RS01615 -4.9 -11.8 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase compare
BWI76_RS11840 -4.9 -6.1 tryptophan synthase subunit alpha compare
BWI76_RS22755 -4.9 -3.3 phosphoadenosine phosphosulfate reductase compare
BWI76_RS23365 -4.8 -5.0 LysR family transcriptional regulator compare
BWI76_RS26455 -4.8 -2.2 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase compare
BWI76_RS04470 -4.6 -11.0 carbamoyl phosphate synthase large subunit compare
BWI76_RS00835 -4.5 -14.5 phosphoenolpyruvate carboxylase compare
BWI76_RS11855 -4.5 -8.5 bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase compare
BWI76_RS08520 -4.5 -2.5 colicin transporter TolQ compare
BWI76_RS23265 -4.4 -2.0 hypothetical protein compare
BWI76_RS07065 -4.4 -8.9 5-(carboxyamino)imidazole ribonucleotide synthase compare
BWI76_RS21265 -4.4 -12.4 phosphoribosylformylglycinamidine synthase compare
BWI76_RS04255 -4.4 -13.6 threonine synthase compare
BWI76_RS02815 -4.3 -2.4 fructose-bisphosphatase class I compare
BWI76_RS04670 -4.3 -13.4 3-isopropylmalate dehydratase large subunit compare
BWI76_RS22690 -4.3 -2.9 adenylyl-sulfate kinase compare
BWI76_RS11850 -4.2 -13.3 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase compare
BWI76_RS05840 -4.2 -2.9 glutamate 5-kinase compare
BWI76_RS04250 -4.2 -7.2 homoserine kinase compare
BWI76_RS04675 -4.2 -8.3 3-isopropylmalate dehydrogenase compare
BWI76_RS00980 -4.1 -12.0 PLP-dependent threonine dehydratase compare
BWI76_RS18925 -4.1 -6.7 histidinol dehydrogenase compare
BWI76_RS17975 -4.1 -3.8 tail-specific protease compare
BWI76_RS00855 -4.0 -12.8 argininosuccinate lyase compare
BWI76_RS27385 -4.0 -7.4 orotate phosphoribosyltransferase compare
BWI76_RS00975 -4.0 -8.8 dihydroxy-acid dehydratase compare
BWI76_RS04245 -4.0 -13.7 bifunctional aspartate kinase/homoserine dehydrogenase I compare
BWI76_RS00845 -4.0 -10.9 N-acetyl-gamma-glutamyl-phosphate reductase compare
BWI76_RS27390 -4.0 -7.0 ribonuclease PH compare
BWI76_RS00805 -4.0 -7.3 5,10-methylenetetrahydrofolate reductase compare
BWI76_RS09910 -3.9 -16.0 dihydroorotate dehydrogenase (quinone) compare
BWI76_RS25115 -3.8 -9.3 argininosuccinate synthase compare
BWI76_RS09760 -3.8 -3.5 3-phosphoshikimate 1-carboxyvinyltransferase compare
BWI76_RS25335 -3.7 -2.1 stringent starvation protein A compare
BWI76_RS18920 -3.7 -4.6 ATP phosphoribosyltransferase compare
BWI76_RS20355 -3.7 -2.3 colicin V production protein compare
BWI76_RS08530 -3.7 -1.7 protein TolA compare
BWI76_RS11845 -3.7 -2.1 tryptophan synthase subunit beta compare
BWI76_RS21235 -3.6 -1.2 hypothetical protein compare
BWI76_RS22765 -3.6 -10.6 sulfite reductase subunit alpha compare
BWI76_RS00850 -3.6 -11.2 acetylglutamate kinase compare
BWI76_RS20895 -3.6 -6.8 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
BWI76_RS26460 -3.6 -4.6 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
BWI76_RS02995 -3.6 -7.3 aspartate carbamoyltransferase compare
BWI76_RS26395 -3.6 -5.4 cell division protein FtsE compare
BWI76_RS23220 -3.5 -9.7 amino-acid N-acetyltransferase compare
BWI76_RS25065 -3.5 -3.7 polyribonucleotide nucleotidyltransferase compare
BWI76_RS04665 -3.5 -17.7 3-isopropylmalate dehydratase small subunit compare
BWI76_RS23920 -3.4 -2.3 D-3-phosphoglycerate dehydrogenase compare
BWI76_RS13755 -3.4 -2.2 hypothetical protein compare
BWI76_RS08525 -3.4 -1.7 colicin transporter compare
BWI76_RS11860 -3.4 -8.4 anthranilate synthase component I compare
BWI76_RS26000 -3.4 -10.6 aspartate aminotransferase family protein compare
BWI76_RS10990 -3.4 -4.1 dihydroorotase compare
BWI76_RS11965 -3.3 -3.2 orotidine-5'-phosphate decarboxylase compare
BWI76_RS03010 -3.2 -6.9 ornithine carbamoyltransferase compare
BWI76_RS07465 -3.2 -1.5 TetR family transcriptional regulator compare
BWI76_RS05015 -3.2 -2.5 transcriptional regulator compare
BWI76_RS21475 -3.2 -2.8 bifunctional chorismate mutase/prephenate dehydrogenase compare
BWI76_RS25645 -3.1 -7.1 shikimate dehydrogenase compare
BWI76_RS06535 -3.1 -2.1 endopeptidase La compare
BWI76_RS22760 -3.1 -7.2 sulfite reductase subunit beta compare
BWI76_RS16485 -3.1 -1.4 ribonuclease T compare
BWI76_RS24285 -3.1 -10.9 cystathionine beta-lyase compare
BWI76_RS00965 -3.1 -1.0 acetolactate synthase 2 small subunit compare
BWI76_RS01655 -3.0 -6.3 homoserine O-succinyltransferase compare
BWI76_RS20750 -3.0 -1.0 carboxysome structural protein EutK compare
BWI76_RS08535 -3.0 -1.6 translocation protein TolB compare
BWI76_RS20965 -3.0 -5.3 phosphoribosylformylglycinamidine cyclo-ligase compare
BWI76_RS04680 -3.0 -11.1 2-isopropylmalate synthase compare
BWI76_RS26390 -2.9 -11.3 cell division protein FtsX compare
BWI76_RS01115 -2.9 -2.5 dTDP-4-amino-4,6-dideoxygalactose transaminase compare
BWI76_RS20150 -2.9 -3.0 NADH:ubiquinone oxidoreductase subunit J compare
BWI76_RS08210 -2.9 -1.3 N-acetylglucosamine-6-phosphate deacetylase compare
BWI76_RS17980 -2.9 -4.2 RNA chaperone ProQ compare
BWI76_RS05835 -2.9 -2.3 gamma-glutamyl-phosphate reductase compare
BWI76_RS04685 -2.9 -10.2 putative leucine operon leader peptide compare
BWI76_RS22805 -2.8 -8.6 GTP diphosphokinase compare
BWI76_RS16965 -2.7 -2.6 murein lipoprotein compare
BWI76_RS12070 -2.7 -1.2 hypothetical protein compare
BWI76_RS25315 -2.7 -11.3 glutamate synthase large subunit compare
BWI76_RS08385 -2.7 -3.4 citrate (Si)-synthase compare
BWI76_RS21075 -2.6 -2.1 membrane protein compare
BWI76_RS00985 -2.6 -7.7 transcriptional regulator IlvY compare
BWI76_RS09755 -2.5 -2.4 phosphoserine transaminase compare
BWI76_RS05120 -2.5 -5.5 bifunctional glycosyl transferase/transpeptidase compare
BWI76_RS00785 -2.5 -4.8 cystathionine gamma-synthase compare
BWI76_RS24605 -2.5 -5.6 dihydroxyacetone kinase subunit DhaM compare
BWI76_RS26470 -2.5 -4.9 4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase compare
BWI76_RS04240 -2.5 -0.8 thr operon leader peptide compare
BWI76_RS00345 -2.4 -3.9 protein disulfide oxidoreductase DsbA compare
BWI76_RS05260 -2.4 -1.5 chaperone compare
BWI76_RS27915 -2.4 -2.2 YceK/YidQ family lipoprotein compare
BWI76_RS08395 -2.3 -2.1 succinate dehydrogenase cytochrome b556 large subunit compare
BWI76_RS20440 -2.3 -3.2 50S ribosomal protein L3 N(5)-glutamine methyltransferase compare
BWI76_RS25060 -2.2 -5.4 lipoprotein NlpI compare
BWI76_RS02530 -2.2 -1.5 tRNA dimethylallyltransferase compare
BWI76_RS25320 -2.2 -7.4 glutamate synthase compare
BWI76_RS19840 -2.2 -0.7 hypothetical protein compare
BWI76_RS04645 -2.2 -3.5 3-dehydroquinase compare
BWI76_RS14320 -2.2 -2.3 hypothetical protein compare
BWI76_RS04160 -2.1 -2.6 phosphoserine phosphatase compare
BWI76_RS09730 -2.1 -0.9 pyruvate formate lyase 1-activating protein compare
BWI76_RS09870 -2.1 -5.7 aromatic amino acid aminotransferase compare
BWI76_RS00240 -2.1 -1.6 FMN-binding protein MioC compare
BWI76_RS02775 -2.1 -6.3 outer membrane protein assembly factor compare
BWI76_RS06680 -2.1 -1.3 hypothetical protein compare
BWI76_RS04715 -2.1 -2.1 division/cell wall cluster transcriptional repressor MraZ compare
BWI76_RS15825 -2.1 -1.6 hypothetical protein compare
BWI76_RS08020 -2.0 -6.3 serine-type D-Ala-D-Ala carboxypeptidase compare
BWI76_RS01220 -2.0 -5.5 DNA-dependent helicase II compare
BWI76_RS01800 -2.0 -3.2 glucose-6-phosphate isomerase compare
BWI76_RS00875 -2.0 -3.9 DNA-binding transcriptional regulator FabR compare
BWI76_RS07785 -2.0 -1.8 transcriptional regulator compare
BWI76_RS08405 -2.0 -3.0 succinate dehydrogenase flavoprotein subunit compare
BWI76_RS15845 -2.0 -1.2 hypothetical protein compare
BWI76_RS14300 -2.0 -2.6 hypothetical protein compare
BWI76_RS24740 -1.9 -2.6 GntR family transcriptional regulator compare
BWI76_RS01080 -1.9 -6.8 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase compare
BWI76_RS11300 -1.9 -1.0 cupin compare
BWI76_RS00180 -1.9 -0.9 F0F1 ATP synthase subunit epsilon compare
BWI76_RS08040 -1.9 -2.4 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH compare
BWI76_RS03660 -1.9 -3.3 hypothetical protein compare
BWI76_RS25070 -1.8 -1.5 hypothetical protein compare
BWI76_RS15110 -1.8 -3.0 putative excinuclease ABC subunit A compare
BWI76_RS27440 -1.8 -1.2 DNA helicase RecG compare
BWI76_RS24900 -1.8 -1.1 DeoR family transcriptional regulator compare
BWI76_RS23490 -1.8 -4.7 fimbrial protein compare
BWI76_RS01090 -1.8 -4.1 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) compare
BWI76_RS19010 -1.8 -2.7 polysaccharide pyruvyl transferase yvff compare
BWI76_RS08275 -1.7 -2.1 LexA regulated protein compare
BWI76_RS24580 -1.7 -2.7 PTS-dependent dihydroxyacetone kinase operon transcriptional regulator DhaR compare
BWI76_RS20640 -1.7 -4.0 cysteine synthase A compare
BWI76_RS00385 -1.7 -6.7 nitrogen assimilation regulatory protein compare
BWI76_RS01135 -1.7 -3.7 lipopolysaccharide N-acetylmannosaminouronosyltransferase compare
BWI76_RS00960 -1.7 -4.0 acetolactate synthase 2 catalytic subunit compare
BWI76_RS21580 -1.7 -1.2 SsrA-binding protein compare
BWI76_RS09825 -1.7 -5.1 envelope biogenesis factor ElyC compare
BWI76_RS23480 -1.7 -13.2 EAL domain-containing protein compare
BWI76_RS02780 -1.7 -10.9 translocation and assembly module TamB compare
BWI76_RS09615 -1.7 -2.3 ATP-dependent Clp protease ATP-binding subunit ClpA compare
BWI76_RS09970 -1.7 -1.2 porin OmpA compare
BWI76_RS09190 -1.6 -2.4 hypothetical protein compare
BWI76_RS26620 -1.6 -0.7 Fe-S biogenesis protein NfuA compare
BWI76_RS21370 -1.6 -1.2 ATP-dependent RNA helicase SrmB compare
BWI76_RS21310 -1.6 -1.3 DNA repair protein RecO compare
BWI76_RS23360 -1.6 -1.9 diaminopimelate decarboxylase compare
BWI76_RS01905 -1.6 -2.5 envelope stress response protein PspG compare
BWI76_RS20360 -1.6 -0.8 cell division protein DedD compare
BWI76_RS16275 -1.5 -3.1 fumarate hydratase FumA compare
BWI76_RS00715 -1.5 -1.0 two-component sensor histidine kinase compare
BWI76_RS00390 -1.5 -5.5 two-component system sensor histidine kinase NtrB compare
BWI76_RS05450 -1.5 -0.6 ribonuclease HI compare
BWI76_RS27425 -1.5 -1.4 DNA-directed RNA polymerase subunit omega compare
BWI76_RS17720 -1.5 -0.4 muramoyltetrapeptide carboxypeptidase compare
BWI76_RS26665 -1.5 -3.2 DNA-binding response regulator compare
BWI76_RS19770 -1.5 -1.6 bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase compare
BWI76_RS01185 -1.5 -1.0 adenylate cyclase compare
BWI76_RS11205 -1.5 -4.6 transcription-repair coupling factor compare
BWI76_RS09335 -1.5 -1.1 baseplate assembly protein W compare
BWI76_RS04705 -1.5 -3.7 DNA-binding transcriptional regulator FruR compare
BWI76_RS26055 -1.5 -5.4 siroheme synthase compare
BWI76_RS10930 -1.4 -4.6 glucan biosynthesis protein G compare
BWI76_RS09670 -1.4 -2.5 recombination factor protein RarA compare
BWI76_RS12265 -1.4 -3.6 hypothetical protein compare
BWI76_RS19035 -1.4 -5.5 dTDP-rhamnosyl transferase compare
BWI76_RS08495 -1.4 -3.4 cytochrome bd-I ubiquinol oxidase subunit I compare
BWI76_RS00400 -1.4 -0.7 glutamine synthetase compare
BWI76_RS00755 -1.4 -2.4 ATP-dependent protease subunit HslV compare
BWI76_RS21375 -1.4 -0.8 autonomous glycyl radical cofactor GrcA compare
BWI76_RS00710 -1.4 -1.7 6-N-hydroxylaminopurine resistance protein compare
BWI76_RS04305 -1.4 -1.0 molecular chaperone DnaJ compare
BWI76_RS15760 -1.3 -1.7 hypothetical protein compare
BWI76_RS05915 -1.3 -2.6 helix-turn-helix transcriptional regulator compare
BWI76_RS01200 -1.3 -0.9 diaminopimelate epimerase compare
BWI76_RS16425 -1.3 -2.3 hypothetical protein compare
BWI76_RS15530 -1.3 -2.6 hypothetical protein compare
BWI76_RS21350 -1.3 -1.7 anti-RNA polymerase sigma factor SigE compare
BWI76_RS13915 -1.3 -5.8 magnesium transport protein MgtC compare
BWI76_RS04270 -1.3 -3.4 transaldolase compare
BWI76_RS23515 -1.3 -2.7 antibiotic biosynthesis monooxygenase compare
BWI76_RS08500 -1.3 -1.9 cytochrome d ubiquinol oxidase subunit 2 compare
BWI76_RS15680 -1.3 -3.6 hypothetical protein compare
BWI76_RS10935 -1.3 -3.5 glucan biosynthesis glucosyltransferase H compare
BWI76_RS12345 -1.3 -3.3 nitrite transporter compare
BWI76_RS23495 -1.2 -4.4 hypothetical protein compare
BWI76_RS21100 -1.2 -1.8 nucleoside-diphosphate kinase compare
BWI76_RS14770 -1.2 -1.0 PTS IIA 2 domain protein compare
BWI76_RS04100 -1.2 -2.4 peptide chain release factor 3 compare


Specific Phenotypes

None in this experiment

For Klebsiella michiganensis M5al in mixed community experiments

For mixed community Mixed culture; Cupriavidus sp. AnTP704 3:1 starting OD to Klebsiella across organisms