Experiment set14IT030 for Klebsiella michiganensis M5al

Compare to:

RCH2_defined_noCarbon with Mixed culture; Pseudomonas simiae WCS417 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x

200 most important genes:

  gene name fitness t score description  
BWI76_RS20965 -7.5 -3.4 phosphoribosylformylglycinamidine cyclo-ligase compare
BWI76_RS20355 -6.6 -3.0 colicin V production protein compare
BWI76_RS04465 -6.2 -3.8 carbamoyl-phosphate synthase small subunit compare
BWI76_RS11840 -5.8 -2.3 tryptophan synthase subunit alpha compare
BWI76_RS18940 -5.8 -5.4 imidazole glycerol phosphate synthase subunit HisH compare
BWI76_RS23365 -5.8 -2.9 LysR family transcriptional regulator compare
BWI76_RS21265 -5.6 -12.2 phosphoribosylformylglycinamidine synthase compare
BWI76_RS07070 -5.5 -3.4 5-(carboxyamino)imidazole ribonucleotide mutase compare
BWI76_RS00850 -5.3 -5.8 acetylglutamate kinase compare
BWI76_RS21465 -5.2 -5.4 bifunctional chorismate mutase/prephenate dehydratase compare
BWI76_RS18930 -5.1 -3.8 histidinol-phosphate transaminase compare
BWI76_RS08385 -5.0 -2.2 citrate (Si)-synthase compare
BWI76_RS25070 -4.8 -1.3 hypothetical protein compare
BWI76_RS00855 -4.8 -6.7 argininosuccinate lyase compare
BWI76_RS01115 -4.7 -2.1 dTDP-4-amino-4,6-dideoxygalactose transaminase compare
BWI76_RS26460 -4.7 -3.2 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
BWI76_RS26455 -4.6 -1.7 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase compare
BWI76_RS18920 -4.6 -2.8 ATP phosphoribosyltransferase compare
BWI76_RS04245 -4.5 -12.1 bifunctional aspartate kinase/homoserine dehydrogenase I compare
BWI76_RS05260 -4.5 -1.2 chaperone compare
BWI76_RS18955 -4.5 -4.4 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase compare
BWI76_RS10990 -4.5 -1.9 dihydroorotase compare
BWI76_RS04470 -4.4 -7.9 carbamoyl phosphate synthase large subunit compare
BWI76_RS00835 -4.4 -14.7 phosphoenolpyruvate carboxylase compare
BWI76_RS23265 -4.2 -1.6 hypothetical protein compare
BWI76_RS08520 -4.2 -1.9 colicin transporter TolQ compare
BWI76_RS20350 -4.2 -2.5 amidophosphoribosyltransferase compare
BWI76_RS09910 -4.2 -15.8 dihydroorotate dehydrogenase (quinone) compare
BWI76_RS00990 -4.2 -9.5 ketol-acid reductoisomerase compare
BWI76_RS20150 -4.2 -1.8 NADH:ubiquinone oxidoreductase subunit J compare
BWI76_RS15845 -4.1 -1.1 hypothetical protein compare
BWI76_RS04305 -4.1 -1.1 molecular chaperone DnaJ compare
BWI76_RS22765 -4.1 -6.2 sulfite reductase subunit alpha compare
BWI76_RS01610 -4.0 -5.5 phosphoribosylamine--glycine ligase compare
BWI76_RS05840 -4.0 -2.7 glutamate 5-kinase compare
BWI76_RS01090 -4.0 -3.7 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) compare
BWI76_RS22690 -4.0 -2.3 adenylyl-sulfate kinase compare
BWI76_RS24600 -3.9 -2.3 dihydroxyacetone kinase compare
BWI76_RS20895 -3.8 -4.9 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
BWI76_RS02725 -3.8 -1.0 HxlR family transcriptional regulator compare
BWI76_RS27385 -3.8 -6.7 orotate phosphoribosyltransferase compare
BWI76_RS18925 -3.8 -5.7 histidinol dehydrogenase compare
BWI76_RS13755 -3.8 -1.4 hypothetical protein compare
BWI76_RS11845 -3.8 -1.5 tryptophan synthase subunit beta compare
BWI76_RS04675 -3.8 -4.5 3-isopropylmalate dehydrogenase compare
BWI76_RS11965 -3.7 -3.5 orotidine-5'-phosphate decarboxylase compare
BWI76_RS25115 -3.6 -4.5 argininosuccinate synthase compare
BWI76_RS04270 -3.6 -3.4 transaldolase compare
BWI76_RS05015 -3.6 -1.9 transcriptional regulator compare
BWI76_RS01615 -3.6 -8.4 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase compare
BWI76_RS08395 -3.5 -1.6 succinate dehydrogenase cytochrome b556 large subunit compare
BWI76_RS08530 -3.5 -1.3 protein TolA compare
BWI76_RS00785 -3.5 -6.5 cystathionine gamma-synthase compare
BWI76_RS25335 -3.5 -1.6 stringent starvation protein A compare
BWI76_RS25920 -3.5 -1.6 peptidylprolyl isomerase compare
BWI76_RS18950 -3.5 -1.9 imidazole glycerol phosphate synthase cyclase subunit compare
BWI76_RS04255 -3.4 -7.3 threonine synthase compare
BWI76_RS10745 -3.3 -0.9 hypothetical protein compare
BWI76_RS14415 -3.3 -1.9 transcriptional regulator, TetR family protein compare
BWI76_RS13560 -3.3 -0.8 amino acid ABC transporter substrate-binding subunit compare
BWI76_RS05835 -3.3 -1.7 gamma-glutamyl-phosphate reductase compare
BWI76_RS00975 -3.2 -8.5 dihydroxy-acid dehydratase compare
BWI76_RS00805 -3.2 -3.2 5,10-methylenetetrahydrofolate reductase compare
BWI76_RS04665 -3.2 -14.7 3-isopropylmalate dehydratase small subunit compare
BWI76_RS02995 -3.2 -4.1 aspartate carbamoyltransferase compare
BWI76_RS23920 -3.1 -1.8 D-3-phosphoglycerate dehydrogenase compare
BWI76_RS08525 -3.1 -1.3 colicin transporter compare
BWI76_RS27425 -3.1 -1.4 DNA-directed RNA polymerase subunit omega compare
BWI76_RS18935 -3.1 -6.2 bifunctional imidazole glycerol-phosphate dehydratase/histidinol phosphatase compare
BWI76_RS03010 -3.1 -6.1 ornithine carbamoyltransferase compare
BWI76_RS11850 -3.0 -6.3 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase compare
BWI76_RS09870 -3.0 -4.8 aromatic amino acid aminotransferase compare
BWI76_RS07465 -3.0 -1.1 TetR family transcriptional regulator compare
BWI76_RS26000 -3.0 -5.2 aspartate aminotransferase family protein compare
BWI76_RS09760 -3.0 -2.5 3-phosphoshikimate 1-carboxyvinyltransferase compare
BWI76_RS21075 -3.0 -1.3 membrane protein compare
BWI76_RS25645 -3.0 -5.3 shikimate dehydrogenase compare
BWI76_RS16315 -3.0 -1.1 SirA-like protein compare
BWI76_RS04685 -2.9 -6.1 putative leucine operon leader peptide compare
BWI76_RS16360 -2.9 -1.1 electron transport complex subunit RsxB compare
BWI76_RS04250 -2.9 -4.8 homoserine kinase compare
BWI76_RS00965 -2.9 -0.7 acetolactate synthase 2 small subunit compare
BWI76_RS00845 -2.9 -9.5 N-acetyl-gamma-glutamyl-phosphate reductase compare
BWI76_RS21475 -2.9 -3.1 bifunctional chorismate mutase/prephenate dehydrogenase compare
BWI76_RS06400 -2.8 -1.7 oxidative-stress-resistance chaperone compare
BWI76_RS07065 -2.8 -4.6 5-(carboxyamino)imidazole ribonucleotide synthase compare
BWI76_RS01350 -2.8 -0.7 NAD(P)H-flavin reductase compare
BWI76_RS15825 -2.8 -1.0 hypothetical protein compare
BWI76_RS01800 -2.7 -1.8 glucose-6-phosphate isomerase compare
BWI76_RS08210 -2.7 -1.0 N-acetylglucosamine-6-phosphate deacetylase compare
BWI76_RS08535 -2.7 -1.2 translocation protein TolB compare
BWI76_RS21580 -2.7 -1.2 SsrA-binding protein compare
BWI76_RS17980 -2.7 -4.1 RNA chaperone ProQ compare
BWI76_RS04670 -2.7 -10.7 3-isopropylmalate dehydratase large subunit compare
BWI76_RS09670 -2.6 -3.0 recombination factor protein RarA compare
BWI76_RS16955 -2.6 -0.9 hypothetical protein compare
BWI76_RS09645 -2.6 -0.7 thioredoxin-disulfide reductase compare
BWI76_RS27390 -2.6 -3.9 ribonuclease PH compare
BWI76_RS01385 -2.6 -2.2 potassium transporter compare
BWI76_RS00980 -2.6 -7.4 PLP-dependent threonine dehydratase compare
BWI76_RS18470 -2.6 -1.6 hypothetical protein compare
BWI76_RS09195 -2.5 -0.9 N-acetyltransferase compare
BWI76_RS25315 -2.5 -9.4 glutamate synthase large subunit compare
BWI76_RS23220 -2.5 -4.8 amino-acid N-acetyltransferase compare
BWI76_RS16965 -2.5 -1.9 murein lipoprotein compare
BWI76_RS25320 -2.5 -6.6 glutamate synthase compare
BWI76_RS17975 -2.5 -3.8 tail-specific protease compare
BWI76_RS11900 -2.5 -0.9 cob(I)yrinic acid a,c-diamide adenosyltransferase compare
BWI76_RS04160 -2.5 -2.9 phosphoserine phosphatase compare
BWI76_RS08020 -2.4 -4.2 serine-type D-Ala-D-Ala carboxypeptidase compare
BWI76_RS01095 -2.4 -1.6 UDP-N-acetyl-D-mannosamine dehydrogenase compare
BWI76_RS21370 -2.4 -0.8 ATP-dependent RNA helicase SrmB compare
BWI76_RS15920 -2.4 -1.2 hypothetical protein compare
BWI76_RS04240 -2.4 -1.9 thr operon leader peptide compare
BWI76_RS05120 -2.3 -3.7 bifunctional glycosyl transferase/transpeptidase compare
BWI76_RS17300 -2.3 -0.8 tRNA-Tyr compare
BWI76_RS01655 -2.3 -4.5 homoserine O-succinyltransferase compare
BWI76_RS01080 -2.3 -6.7 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase compare
BWI76_RS04680 -2.3 -8.0 2-isopropylmalate synthase compare
BWI76_RS00240 -2.3 -1.2 FMN-binding protein MioC compare
BWI76_RS13545 -2.2 -1.1 N-acetyltransferase compare
BWI76_RS24605 -2.2 -4.7 dihydroxyacetone kinase subunit DhaM compare
BWI76_RS10575 -2.2 -0.8 polar amino acid ABC transporter permease compare
BWI76_RS01190 -2.2 -1.4 iron donor protein CyaY compare
BWI76_RS22760 -2.2 -6.0 sulfite reductase subunit beta compare
BWI76_RS16500 -2.2 -2.0 superoxide dismutase [Fe] compare
BWI76_RS17290 -2.1 -3.0 formyltetrahydrofolate deformylase compare
BWI76_RS09025 -2.1 -2.0 GntR family transcriptional regulator compare
BWI76_RS23360 -2.1 -1.0 diaminopimelate decarboxylase compare
BWI76_RS24285 -2.1 -4.3 cystathionine beta-lyase compare
BWI76_RS15365 -2.0 -1.5 hypothetical protein compare
BWI76_RS09625 -2.0 -0.9 hypothetical protein compare
BWI76_RS19840 -2.0 -0.5 hypothetical protein compare
BWI76_RS12895 -2.0 -3.1 hypothetical protein compare
BWI76_RS02530 -2.0 -1.1 tRNA dimethylallyltransferase compare
BWI76_RS20360 -2.0 -0.7 cell division protein DedD compare
BWI76_RS03660 -2.0 -2.3 hypothetical protein compare
BWI76_RS00390 -2.0 -3.8 two-component system sensor histidine kinase NtrB compare
BWI76_RS10955 -2.0 -1.4 hypothetical protein compare
BWI76_RS22755 -1.9 -2.7 phosphoadenosine phosphosulfate reductase compare
BWI76_RS12750 -1.9 -2.9 hypothetical protein compare
BWI76_RS16485 -1.9 -1.2 ribonuclease T compare
BWI76_RS24595 -1.9 -2.5 dihydroxyacetone kinase subunit DhaK compare
BWI76_RS04100 -1.9 -2.5 peptide chain release factor 3 compare
BWI76_RS04645 -1.9 -3.0 3-dehydroquinase compare
BWI76_RS26390 -1.9 -5.8 cell division protein FtsX compare
BWI76_RS14850 -1.9 -2.7 LacI family transcriptional regulator compare
BWI76_RS11860 -1.9 -4.5 anthranilate synthase component I compare
BWI76_RS24885 -1.9 -0.8 PTS galactitol transporter subunit IIB compare
BWI76_RS18870 -1.9 -1.7 protein NifZ compare
BWI76_RS26665 -1.8 -2.3 DNA-binding response regulator compare
BWI76_RS02775 -1.8 -3.0 outer membrane protein assembly factor compare
BWI76_RS02855 -1.8 -2.8 cytochrome B562 compare
BWI76_RS24075 -1.8 -2.7 glutathione synthase compare
BWI76_RS17955 -1.8 -2.8 hypothetical protein compare
BWI76_RS00985 -1.8 -4.9 transcriptional regulator IlvY compare
BWI76_RS11855 -1.8 -3.9 bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase compare
BWI76_RS00180 -1.8 -0.6 F0F1 ATP synthase subunit epsilon compare
BWI76_RS22805 -1.8 -4.3 GTP diphosphokinase compare
BWI76_RS00960 -1.8 -3.7 acetolactate synthase 2 catalytic subunit compare
BWI76_RS01110 -1.8 -2.7 TDP-fucosamine acetyltransferase compare
BWI76_RS01125 -1.8 -3.0 4-alpha-L-fucosyltransferase compare
BWI76_RS22950 -1.7 -1.5 membrane protein compare
BWI76_RS19770 -1.7 -1.3 bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase compare
BWI76_RS15690 -1.7 -2.5 hypothetical protein compare
BWI76_RS09655 -1.7 -2.3 leucine-responsive regulatory protein compare
BWI76_RS03415 -1.7 -2.2 LacI family transcriptional regulator compare
BWI76_RS16480 -1.7 -1.2 lactoylglutathione lyase compare
BWI76_RS20440 -1.7 -1.6 50S ribosomal protein L3 N(5)-glutamine methyltransferase compare
BWI76_RS26440 -1.7 -0.9 hypothetical protein compare
BWI76_RS26095 -1.6 -0.6 shikimate kinase compare
BWI76_RS16425 -1.6 -2.5 hypothetical protein compare
BWI76_RS04705 -1.6 -2.3 DNA-binding transcriptional regulator FruR compare
BWI76_RS10935 -1.6 -3.6 glucan biosynthesis glucosyltransferase H compare
BWI76_RS19730 -1.6 -2.3 1-phosphofructokinase compare
BWI76_RS00345 -1.6 -3.0 protein disulfide oxidoreductase DsbA compare
BWI76_RS24900 -1.6 -0.8 DeoR family transcriptional regulator compare
BWI76_RS27440 -1.6 -1.1 DNA helicase RecG compare
BWI76_RS21675 -1.6 -0.6 hypothetical protein compare
BWI76_RS12215 -1.6 -3.0 HNH endonuclease compare
BWI76_RS24400 -1.6 -2.1 outer membrane channel protein TolC compare
BWI76_RS15110 -1.6 -3.0 putative excinuclease ABC subunit A compare
BWI76_RS20310 -1.6 -1.5 hypothetical protein compare
BWI76_RS14320 -1.6 -1.2 hypothetical protein compare
BWI76_RS01220 -1.6 -3.3 DNA-dependent helicase II compare
BWI76_RS15635 -1.5 -1.8 hypothetical protein compare
BWI76_RS09765 -1.5 -1.9 metalloprotease compare
BWI76_RS12420 -1.5 -0.8 peptide ABC transporter substrate-binding protein SapA compare
BWI76_RS16490 -1.5 -1.1 glutaredoxin compare
BWI76_RS04515 -1.5 -0.9 Co2+/Mg2+ efflux protein ApaG compare
BWI76_RS23490 -1.5 -4.4 fimbrial protein compare
BWI76_RS15115 -1.5 -1.0 MFS transporter compare
BWI76_RS20785 -1.5 -0.9 ethanolamine utilization protein EutJ compare
BWI76_RS00355 -1.5 -0.6 DNA polymerase I compare
BWI76_RS09735 -1.5 -2.7 formate acetyltransferase compare
BWI76_RS06635 -1.5 -1.7 methylated-DNA--protein-cysteine methyltransferase compare
BWI76_RS09030 -1.5 -3.5 transpeptidase compare
BWI76_RS21690 -1.5 -1.2 hypothetical protein compare
BWI76_RS06730 -1.5 -0.9 lac repressor compare
BWI76_RS26395 -1.5 -2.5 cell division protein FtsE compare


Specific Phenotypes

None in this experiment

For Klebsiella michiganensis M5al in mixed community experiments

For mixed community Mixed culture; Pseudomonas simiae WCS417 3:1 starting OD to Klebsiella across organisms