Experiment set14IT027 for Pseudomonas syringae pv. syringae B728a

Compare to:

KB with Harmalol 10 mM

200 most detrimental genes:

  gene name fitness t score description  
Psyr_2540 +2.3 4.9 Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal compare
Psyr_2396 +1.0 2.3 Tartrate dehydrogenase compare
Psyr_4682 +1.0 2.4 conserved hypothetical protein compare
Psyr_4730 +0.9 2.6 FecR protein compare
Psyr_4183 +0.9 2.7 protein translocase subunit secG compare
Psyr_2285 +0.9 1.6 Twin-arginine translocation pathway signal compare
Psyr_1796 +0.9 1.9 GCN5-related N-acetyltransferase compare
Psyr_1277 +0.9 2.3 formate-dependent phosphoribosylglycinamide formyltransferase compare
Psyr_2890 +0.9 3.1 amino acid ABC transporter ATP-binding protein, PAAT family compare
Psyr_1973 +0.9 2.0 Aspartate transaminase compare
Psyr_2401 +0.9 2.5 extracellular solute-binding protein, family 1 compare
Psyr_1718 +0.9 2.1 von Willebrand factor, type A compare
Psyr_1198 +0.8 2.0 type III secretion protein HrpF compare
Psyr_2808 +0.8 1.6 hypothetical protein compare
Psyr_2211 +0.8 2.7 monooxygenase, NtaA/SnaA/SoxA family compare
Psyr_4116 +0.8 2.4 Transport-associated protein compare
Psyr_3466 +0.8 2.2 Flagellin, C-terminal:Flagellin, N-terminal compare
Psyr_0875 +0.8 3.9 outer membrane transport energization protein TonB compare
Psyr_4490 +0.8 1.7 transcriptional regulator, DeoR family compare
Psyr_2151 +0.8 1.5 monosaccharide ABC transporter substrate-binding protein, CUT2 family compare
Psyr_2545 +0.8 2.7 Metallophosphoesterase compare
Psyr_1294 +0.7 2.3 regulatory protein, LuxR:Response regulator receiver compare
Psyr_0633 +0.7 2.3 conserved hypothetical protein compare
Psyr_1596 +0.7 2.1 Helix-turn-helix motif protein compare
Psyr_3462 +0.7 2.1 conserved hypothetical protein compare
Psyr_2590 +0.7 2.4 Periplasmic binding protein compare
Psyr_2264 +0.7 1.0 Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal compare
Psyr_2244 +0.7 1.3 DNA topoisomerase III compare
Psyr_2869 +0.7 2.7 xenobiotic compound monooxygenase, DszA family compare
Psyr_2030 +0.7 1.5 Calcium-binding EF-hand compare
Psyr_2275 +0.7 2.0 glutamate synthase (NADPH) GltB3 subunit compare
Psyr_1946 +0.7 1.3 diaminobutyrate aminotransferase apoenzyme compare
Psyr_2332 +0.7 2.3 conserved hypothetical protein compare
Psyr_3779 +0.7 1.8 GCN5-related N-acetyltransferase compare
Psyr_3118 +0.7 2.3 transcriptional regulator, GntR family compare
Psyr_1850 +0.7 1.6 [LSU ribosomal protein L3P]-glutamine N5-methyltransferase compare
Psyr_2544 +0.7 2.2 Alkylhydroperoxidase AhpD core:Uncharacterized peroxidase-related protein compare
Psyr_0179 +0.7 2.3 Protein of unknown function DUF1289 compare
Psyr_3255 +0.6 1.4 multisubunit potassium/proton antiporter, PhaE subunit compare
Psyr_1317 +0.6 1.5 conserved hypothetical protein compare
Psyr_3919 +0.6 3.2 D-alanine--D-alanine ligase compare
Psyr_0724 +0.6 1.4 conserved hypothetical protein compare
Psyr_0404 +0.6 3.0 Fimbrial assembly compare
Psyr_3000 +0.6 1.7 methyltransferase, putative compare
Psyr_2497 +0.6 2.4 lipoprotein, putative compare
Psyr_4774 +0.6 1.6 Hypothetical protein compare
Psyr_3394 +0.6 2.8 conserved hypothetical protein compare
Psyr_1202 +0.6 1.8 negative regulator of hrp expression HrpV compare
Psyr_2253 +0.6 1.4 Phosphonate metabolism compare
Psyr_3594 +0.6 1.6 membrane protein-like protein compare
Psyr_0444 +0.6 0.8 Malonate decarboxylase delta subunit compare
Psyr_2887 +0.6 1.6 Endoribonuclease L-PSP compare
Psyr_4605 +0.6 2.1 transcriptional regulator PrtN, putative compare
Psyr_2527 +0.6 2.0 GCN5-related N-acetyltransferase compare
Psyr_2894 +0.6 1.0 conserved hypothetical protein compare
Psyr_1567 +0.6 2.0 Uncharacterized conserved protein UCP006173 compare
Psyr_2475 +0.6 3.5 phosphate ABC transporter substrate-binding protein, PhoT family compare
Psyr_4804 +0.6 1.4 conserved hypothetical protein compare
Psyr_1124 +0.6 2.6 conserved hypothetical protein compare
Psyr_1632 +0.6 3.2 ComEC/Rec2-related protein:DNA internalization-related competence protein ComEC/Rec2 compare
Psyr_3638 +0.6 2.5 UDP-glucose 4-epimerase, putative compare
Psyr_2589 +0.6 2.7 IucA/IucC compare
Psyr_3854 +0.6 0.9 OmpA/MotB compare
Psyr_2330 +0.6 2.0 FAD dependent oxidoreductase compare
Psyr_4893 +0.6 1.3 imidazole glycerol phosphate synthase subunit hisF compare
Psyr_1955 +0.6 1.7 Propeptide, PepSY amd peptidase M4:PepSY-associated TM helix compare
Psyr_3601 +0.6 1.2 conserved hypothetical protein compare
Psyr_1334 +0.5 1.5 Cysteine desulfuration protein SufE compare
Psyr_1187 +0.5 1.5 type III chaperone protein ShcE compare
Psyr_2783 +0.5 2.6 conserved hypothetical protein compare
Psyr_2755 +0.5 2.1 2-nitropropane dioxygenase, NPD compare
Psyr_2802 +0.5 1.2 lipoprotein, putative compare
Psyr_1528 +0.5 1.4 Arc-like DNA binding protein compare
Psyr_4350 +0.5 1.2 Protein of unknown function DUF218 compare
Psyr_2069 +0.5 1.3 conserved hypothetical protein compare
Psyr_1800 +0.5 1.9 transcriptional regulator, LysR family compare
Psyr_2870 +0.5 1.6 CDS compare
Psyr_1270 +0.5 0.9 conserved hypothetical protein compare
Psyr_3226 +0.5 1.8 Transcriptional activator RfaH compare
Psyr_3476 +0.5 1.1 Flagellar basal body rod protein:Protein of unknown function DUF1078 compare
Psyr_3967 +0.5 1.4 membrane protein TctB, putative compare
Psyr_3357 +0.5 1.3 transcriptional regulator, LysR family compare
Psyr_1431 +0.5 1.8 hypothetical protein compare
Psyr_5029 +0.5 1.0 Rubredoxin-type Fe(Cys)4 protein compare
Psyr_2435 +0.5 1.9 Xylulokinase compare
Psyr_3300 +0.5 1.5 Conserved hypothetical protein 147 compare
Psyr_1163 +0.5 1.6 Isochorismatase hydrolase compare
Psyr_1547 +0.5 1.9 glycine cleavage system transcriptional repressor compare
Psyr_1862 +0.5 2.3 Zinc transporter ZIP compare
Psyr_1004 +0.5 1.7 nucleoside ABC transporter membrane protein compare
Psyr_4299 +0.5 2.0 transcriptional regulator, AsnC family compare
Psyr_3337 +0.5 1.6 gluconate kinase, SKI family compare
Psyr_2342 +0.5 1.6 CBS:Transporter-associated region:Integral membrane protein TerC compare
Psyr_2406 +0.5 0.8 Flavin reductase-like protein compare
Psyr_4336 +0.5 1.5 ribosomal large subunit pseudouridine synthase E compare
Psyr_1039 +0.5 1.4 FecR protein compare
Psyr_3626 +0.5 2.2 transcriptional regulator, MarR family compare
Psyr_0510 +0.5 1.8 conserved hypothetical protein compare
Psyr_2991 +0.5 2.0 GCN5-related N-acetyltransferase compare
Psyr_1337 +0.5 1.2 Conserved hypothetical protein ArsC related protein compare
Psyr_2646 +0.4 3.1 Radical SAM compare
Psyr_4788 +0.4 1.1 lipoprotein, putative compare
Psyr_1988 +0.4 1.2 2-keto-3-deoxy-phosphogalactonate aldolase compare
Psyr_2675 +0.4 1.7 transcriptional regulator, GntR family compare
Psyr_2305 +0.4 2.1 Natural resistance-associated macrophage protein compare
Psyr_1807 +0.4 1.5 Allantoicase compare
Psyr_1067 +0.4 1.0 GTP cyclohydrolase subunit MoaC compare
Psyr_0437 +0.4 0.9 acyl carrier protein, putative compare
Psyr_4470 +0.4 1.7 ABC transporter compare
Psyr_2209 +0.4 1.0 ABC transporter, substrate-binding protein, aliphatic sulfonate compare
Psyr_0975 +0.4 2.2 homocysteine S-methyltransferase compare
Psyr_4207 +0.4 2.4 GCN5-related N-acetyltransferase compare
Psyr_3630 +0.4 2.0 conserved hypothetical protein compare
Psyr_2057 +0.4 1.4 acyl-CoA thioesterase II, putative compare
Psyr_2767 +0.4 1.0 Glycoside hydrolase, family 19 compare
Psyr_4593 +0.4 1.1 sigma factor domain protein compare
Psyr_2118 +0.4 1.1 protein of unknown function DUF883 compare
Psyr_4125 +0.4 1.4 Protein of unknown function DUF1043 compare
Psyr_2397 +0.4 1.2 transcriptional regulator, LysR family compare
Psyr_4327 +0.4 2.4 Endoribonuclease L-PSP compare
Psyr_3323 +0.4 1.8 conserved hypothetical protein compare
Psyr_2461 +0.4 1.1 Uncharacterized conserved protein UCP030820 compare
Psyr_3426 +0.4 2.3 adenine phosphoribosyltransferase compare
Psyr_3458 +0.4 1.1 Flagellar hook-basal body complex protein FliE compare
Psyr_3429 +0.4 1.3 CheW-like protein compare
Psyr_3284 +0.4 1.1 SOS cell division inhibitor SulA compare
Psyr_2105 +0.4 1.5 conserved hypothetical protein compare
Psyr_0532 +0.4 2.1 conserved hypothetical protein compare
Psyr_2452 +0.4 2.0 Enoyl-CoA hydratase/isomerase compare
Psyr_0622 +0.4 1.4 transcriptional regulator, XRE family compare
Psyr_3107 +0.4 0.7 conserved hypothetical protein compare
Psyr_1900 +0.4 1.7 ApbE-like lipoprotein compare
Psyr_1085 +0.4 1.9 23S rRNA m(6)A-1618 methyltransferase compare
Psyr_1820 +0.4 1.7 conserved hypothetical protein compare
Psyr_1992 +0.4 1.4 Zinc-containing alcohol dehydrogenase superfamily compare
Psyr_2093 +0.4 2.4 Mg2+ transporter protein, CorA-like protein compare
Psyr_2801 +0.4 2.1 hypothetical protein compare
Psyr_3837 +0.4 1.4 conserved hypothetical protein compare
Psyr_2380 +0.4 1.6 hypothetical protein compare
Psyr_2386 +0.4 0.9 hypothetical protein compare
Psyr_1468 +0.4 1.9 hypothetical protein compare
Psyr_3640 +0.4 1.0 conserved hypothetical protein compare
Psyr_3867 +0.4 1.1 hypothetical protein compare
Psyr_0635 +0.4 1.1 MaoC-like dehydratase compare
Psyr_1505 +0.4 0.8 Protein of unknown function DUF156 compare
Psyr_2708 +0.4 1.5 Rieske [2Fe-2S] region compare
Psyr_2915 +0.4 1.3 transcriptional regulator, AraC family with amidase-like domain protein compare
Psyr_2456 +0.4 1.2 Short-chain dehydrogenase/reductase SDR compare
Psyr_3787 +0.4 1.8 conserved hypothetical protein compare
Psyr_2294 +0.4 1.3 conserved hypothetical protein compare
Psyr_1591 +0.4 1.9 Glyoxalase/bleomycin resistance protein/dioxygenase compare
Psyr_2139 +0.4 2.0 Kef-type potassium/proton antiporter, CPA2 family compare
Psyr_1314 +0.4 1.5 lipoprotein, putative compare
Psyr_2122 +0.4 1.6 protocatechuate 3,4-dioxygenase, beta subunit compare
Psyr_2680 +0.4 1.1 Binding-protein-dependent transport systems inner membrane component compare
Psyr_2455 +0.4 2.0 Oxidoreductase, N-terminal:Oxidoreductase, C-terminal compare
Psyr_3078 +0.4 2.1 Peptidase M20:Peptidase M20 compare
Psyr_4143 +0.4 1.2 HAD-superfamily hydrolase, subfamily IIIA:Phosphatase YrbI compare
Psyr_3688 +0.4 1.2 conserved hypothetical protein compare
Psyr_1811 +0.4 0.7 transcriptional regulator, GntR family compare
Psyr_2351 +0.4 1.5 tRNA synthetase, class-II (G, H, P and S) compare
Psyr_2765 +0.4 1.1 conserved domain protein compare
Psyr_3354 +0.4 1.7 Ankyrin compare
Psyr_4367 +0.4 1.2 Iojap-related protein compare
Psyr_2795 +0.4 1.6 conserved hypothetical protein compare
Psyr_3782 +0.4 1.0 CsbD-like protein compare
Psyr_2552 +0.4 1.0 cyclase/dehydrase compare
Psyr_1411 +0.4 1.6 4-hydroxybenzoyl-CoA thioesterase compare
Psyr_3694 +0.4 1.8 MazG, bacterial compare
Psyr_3563 +0.4 1.7 arginine succinyltransferase compare
Psyr_3176 +0.4 0.9 camphor resistance protein CrcB compare
Psyr_1707 +0.4 1.5 transcriptional regulator, GntR family compare
Psyr_2395 +0.4 1.6 transcriptional regulator, LysR family compare
Psyr_1784 +0.4 2.7 TonB-dependent siderophore receptor compare
Psyr_2553 +0.4 1.0 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases-related enzyme compare
Psyr_2295 +0.4 2.1 ABC transporter, transmembrane region:ABC transporter compare
Psyr_0447 +0.4 0.7 malonate decarboxylase subunit, putative compare
Psyr_2733 +0.4 0.9 Short-chain dehydrogenase/reductase SDR compare
Psyr_2560 +0.4 1.6 hypothetical protein compare
Psyr_0435 +0.4 0.7 membrane protein, putative compare
Psyr_3448 +0.4 2.0 Flagellar basal body-associated protein FliL compare
Psyr_0824 +0.4 1.3 acetyl-CoA acetyltransferase compare
Psyr_1851 +0.4 1.9 conserved hypothetical protein compare
Psyr_1868 +0.4 1.6 hypothetical protein compare
Psyr_3399 +0.4 1.7 Endoribonuclease L-PSP compare
Psyr_3484 +0.4 1.4 regulatory protein, LysR:LysR, substrate-binding protein compare
Psyr_3896 +0.3 1.0 BFD-like [2Fe-2S]-binding region compare
Psyr_3632 +0.3 1.3 conserved hypothetical protein compare
Psyr_2836 +0.3 1.2 hypothetical protein compare
Psyr_0978 +0.3 1.8 lipoprotein, putative compare
Psyr_2493 +0.3 1.5 Major facilitator superfamily compare
Psyr_3066 +0.3 1.6 conserved hypothetical protein compare
Psyr_2268 +0.3 1.2 transcriptional regulator, LysR family compare
Psyr_3661 +0.3 1.4 Fumarate hydratase, class II compare
Psyr_2202 +0.3 0.8 ABC transporter compare
Psyr_2026 +0.3 1.0 conserved hypothetical protein compare
Psyr_2554 +0.3 1.1 Fatty acid desaturase compare
Psyr_2949 +0.3 1.8 conserved hypothetical protein compare
Psyr_1893 +0.3 1.6 Isochorismatase hydrolase compare
Psyr_1434 +0.3 1.1 Antibiotic biosynthesis monooxygenase compare


Specific Phenotypes

For 2 genes in this experiment

For stress Harmalol in Pseudomonas syringae pv. syringae B728a

For stress Harmalol across organisms