Experiment set14IT027 for Klebsiella michiganensis M5al

Compare to:

RCH2_defined_noCarbon with Mixed culture; Burkholderia bryophila 376MFSha3.1 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x

200 most important genes:

  gene name fitness t score description  
BWI76_RS07065 -5.1 -5.7 5-(carboxyamino)imidazole ribonucleotide synthase compare
BWI76_RS08385 -5.0 -2.1 citrate (Si)-synthase compare
BWI76_RS26455 -4.6 -1.7 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase compare
BWI76_RS22755 -4.5 -3.1 phosphoadenosine phosphosulfate reductase compare
BWI76_RS01615 -4.4 -8.3 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase compare
BWI76_RS18950 -4.4 -5.4 imidazole glycerol phosphate synthase cyclase subunit compare
BWI76_RS06680 -4.2 -1.1 hypothetical protein compare
BWI76_RS09335 -4.2 -1.1 baseplate assembly protein W compare
BWI76_RS25280 -4.2 -1.1 RNase adaptor protein RapZ compare
BWI76_RS25115 -4.2 -6.6 argininosuccinate synthase compare
BWI76_RS08520 -4.1 -1.8 colicin transporter TolQ compare
BWI76_RS15845 -4.1 -1.1 hypothetical protein compare
BWI76_RS18935 -4.0 -5.1 bifunctional imidazole glycerol-phosphate dehydratase/histidinol phosphatase compare
BWI76_RS18925 -4.0 -7.0 histidinol dehydrogenase compare
BWI76_RS17975 -4.0 -4.1 tail-specific protease compare
BWI76_RS22690 -3.9 -2.2 adenylyl-sulfate kinase compare
BWI76_RS20440 -3.9 -3.4 50S ribosomal protein L3 N(5)-glutamine methyltransferase compare
BWI76_RS06405 -3.9 -1.6 2-dehydropantoate 2-reductase compare
BWI76_RS16955 -3.8 -1.0 hypothetical protein compare
BWI76_RS12070 -3.8 -1.0 hypothetical protein compare
BWI76_RS11900 -3.8 -1.0 cob(I)yrinic acid a,c-diamide adenosyltransferase compare
BWI76_RS04465 -3.7 -5.5 carbamoyl-phosphate synthase small subunit compare
BWI76_RS00855 -3.7 -7.3 argininosuccinate lyase compare
BWI76_RS21450 -3.7 -1.9 23S rRNA pseudouridine(1911/1915/1917) synthase compare
BWI76_RS21465 -3.6 -4.1 bifunctional chorismate mutase/prephenate dehydratase compare
BWI76_RS05015 -3.6 -1.8 transcriptional regulator compare
BWI76_RS20350 -3.6 -3.3 amidophosphoribosyltransferase compare
BWI76_RS00845 -3.6 -8.9 N-acetyl-gamma-glutamyl-phosphate reductase compare
BWI76_RS18955 -3.6 -4.0 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase compare
BWI76_RS11300 -3.6 -0.9 cupin compare
BWI76_RS07070 -3.5 -2.5 5-(carboxyamino)imidazole ribonucleotide mutase compare
BWI76_RS25920 -3.5 -1.5 peptidylprolyl isomerase compare
BWI76_RS20355 -3.5 -2.9 colicin V production protein compare
BWI76_RS20895 -3.5 -2.8 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
BWI76_RS08530 -3.5 -1.3 protein TolA compare
BWI76_RS21235 -3.4 -0.9 hypothetical protein compare
BWI76_RS24285 -3.4 -6.9 cystathionine beta-lyase compare
BWI76_RS21265 -3.4 -10.2 phosphoribosylformylglycinamidine synthase compare
BWI76_RS11845 -3.3 -2.0 tryptophan synthase subunit beta compare
BWI76_RS05075 -3.3 -0.8 type II secretion system protein GspG compare
BWI76_RS11850 -3.3 -6.5 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase compare
BWI76_RS10745 -3.3 -0.8 hypothetical protein compare
BWI76_RS02815 -3.3 -1.7 fructose-bisphosphatase class I compare
BWI76_RS05835 -3.3 -1.7 gamma-glutamyl-phosphate reductase compare
BWI76_RS08720 -3.2 -1.9 imidazolonepropionase compare
BWI76_RS18920 -3.2 -2.0 ATP phosphoribosyltransferase compare
BWI76_RS01610 -3.2 -6.2 phosphoribosylamine--glycine ligase compare
BWI76_RS00850 -3.2 -6.1 acetylglutamate kinase compare
BWI76_RS04160 -3.2 -2.8 phosphoserine phosphatase compare
BWI76_RS13560 -3.2 -0.8 amino acid ABC transporter substrate-binding subunit compare
BWI76_RS27385 -3.2 -6.3 orotate phosphoribosyltransferase compare
BWI76_RS04250 -3.2 -6.6 homoserine kinase compare
BWI76_RS04645 -3.1 -2.2 3-dehydroquinase compare
BWI76_RS06485 -3.1 -1.5 cytochrome o ubiquinol oxidase subunit III compare
BWI76_RS00710 -3.1 -1.6 6-N-hydroxylaminopurine resistance protein compare
BWI76_RS04245 -3.1 -9.9 bifunctional aspartate kinase/homoserine dehydrogenase I compare
BWI76_RS20965 -3.1 -1.8 phosphoribosylformylglycinamidine cyclo-ligase compare
BWI76_RS14170 -3.0 -2.7 hypothetical protein compare
BWI76_RS25645 -3.0 -5.0 shikimate dehydrogenase compare
BWI76_RS22765 -3.0 -9.0 sulfite reductase subunit alpha compare
BWI76_RS00805 -3.0 -4.7 5,10-methylenetetrahydrofolate reductase compare
BWI76_RS09655 -3.0 -5.0 leucine-responsive regulatory protein compare
BWI76_RS00835 -3.0 -7.6 phosphoenolpyruvate carboxylase compare
BWI76_RS06475 -3.0 -1.1 protoheme IX farnesyltransferase compare
BWI76_RS09910 -3.0 -11.0 dihydroorotate dehydrogenase (quinone) compare
BWI76_RS21075 -3.0 -1.3 membrane protein compare
BWI76_RS14300 -3.0 -2.3 hypothetical protein compare
BWI76_RS18930 -2.9 -3.9 histidinol-phosphate transaminase compare
BWI76_RS21690 -2.9 -1.0 hypothetical protein compare
BWI76_RS26460 -2.9 -3.4 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
BWI76_RS26410 -2.9 -1.0 membrane protein compare
BWI76_RS01350 -2.8 -0.7 NAD(P)H-flavin reductase compare
BWI76_RS04670 -2.8 -8.0 3-isopropylmalate dehydratase large subunit compare
BWI76_RS23580 -2.8 -2.1 hypothetical protein compare
BWI76_RS08380 -2.7 -1.0 endonuclease VIII compare
BWI76_RS23265 -2.7 -1.9 hypothetical protein compare
BWI76_RS00975 -2.7 -8.4 dihydroxy-acid dehydratase compare
BWI76_RS00990 -2.7 -6.9 ketol-acid reductoisomerase compare
BWI76_RS21685 -2.7 -1.0 hypothetical protein compare
BWI76_RS23220 -2.7 -5.1 amino-acid N-acetyltransferase compare
BWI76_RS11855 -2.7 -8.4 bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase compare
BWI76_RS08210 -2.7 -1.0 N-acetylglucosamine-6-phosphate deacetylase compare
BWI76_RS20640 -2.7 -2.4 cysteine synthase A compare
BWI76_RS23365 -2.7 -3.2 LysR family transcriptional regulator compare
BWI76_RS04470 -2.7 -6.9 carbamoyl phosphate synthase large subunit compare
BWI76_RS15000 -2.7 -2.6 amino acid ABC transporter ATP-binding protein compare
BWI76_RS08405 -2.7 -2.9 succinate dehydrogenase flavoprotein subunit compare
BWI76_RS08535 -2.7 -1.1 translocation protein TolB compare
BWI76_RS21580 -2.7 -1.1 SsrA-binding protein compare
BWI76_RS04665 -2.6 -13.0 3-isopropylmalate dehydratase small subunit compare
BWI76_RS01385 -2.6 -2.3 potassium transporter compare
BWI76_RS10990 -2.6 -2.9 dihydroorotase compare
BWI76_RS09645 -2.6 -0.6 thioredoxin-disulfide reductase compare
BWI76_RS20380 -2.6 -0.6 tRNA pseudouridine(38-40) synthase TruA compare
BWI76_RS05840 -2.6 -2.7 glutamate 5-kinase compare
BWI76_RS21810 -2.6 -0.9 universal stress protein compare
BWI76_RS20785 -2.6 -1.1 ethanolamine utilization protein EutJ compare
BWI76_RS06535 -2.6 -2.5 endopeptidase La compare
BWI76_RS25315 -2.6 -8.1 glutamate synthase large subunit compare
BWI76_RS04675 -2.5 -3.3 3-isopropylmalate dehydrogenase compare
BWI76_RS16275 -2.5 -2.7 fumarate hydratase FumA compare
BWI76_RS11965 -2.5 -2.3 orotidine-5'-phosphate decarboxylase compare
BWI76_RS03010 -2.5 -6.0 ornithine carbamoyltransferase compare
BWI76_RS00980 -2.5 -6.4 PLP-dependent threonine dehydratase compare
BWI76_RS14915 -2.5 -2.2 hypothetical protein compare
BWI76_RS18940 -2.5 -3.1 imidazole glycerol phosphate synthase subunit HisH compare
BWI76_RS19905 -2.4 -4.0 OmpK36 porin compare
BWI76_RS26000 -2.4 -7.2 aspartate aminotransferase family protein compare
BWI76_RS12390 -2.4 -1.6 antibiotic biosynthesis monooxygenase compare
BWI76_RS19870 -2.4 -2.7 malate:quinone oxidoreductase compare
BWI76_RS00985 -2.4 -7.1 transcriptional regulator IlvY compare
BWI76_RS21475 -2.3 -2.0 bifunctional chorismate mutase/prephenate dehydrogenase compare
BWI76_RS21100 -2.3 -1.5 nucleoside-diphosphate kinase compare
BWI76_RS00240 -2.3 -1.2 FMN-binding protein MioC compare
BWI76_RS11860 -2.3 -7.0 anthranilate synthase component I compare
BWI76_RS09640 -2.3 -2.0 cysteine/glutathione ABC transporter permease/ATP-binding protein CydD compare
BWI76_RS16515 -2.3 -1.6 LysR family transcriptional regulator compare
BWI76_RS24605 -2.3 -5.1 dihydroxyacetone kinase subunit DhaM compare
BWI76_RS12750 -2.2 -2.9 hypothetical protein compare
BWI76_RS21795 -2.2 -2.9 EAL domain-containing protein compare
BWI76_RS22760 -2.2 -4.0 sulfite reductase subunit beta compare
BWI76_RS04305 -2.2 -0.9 molecular chaperone DnaJ compare
BWI76_RS04525 -2.2 -1.2 4-hydroxythreonine-4-phosphate dehydrogenase PdxA compare
BWI76_RS17980 -2.2 -3.6 RNA chaperone ProQ compare
BWI76_RS04680 -2.1 -8.5 2-isopropylmalate synthase compare
BWI76_RS00785 -2.1 -4.8 cystathionine gamma-synthase compare
BWI76_RS27820 -2.1 -0.7 ilvB operon leader peptide IvbL compare
BWI76_RS11205 -2.1 -3.0 transcription-repair coupling factor compare
BWI76_RS17310 -2.1 -3.5 AsnC family transcriptional regulator compare
BWI76_RS03660 -2.1 -2.4 hypothetical protein compare
BWI76_RS11170 -2.1 -1.0 hypothetical protein compare
BWI76_RS11840 -2.1 -3.8 tryptophan synthase subunit alpha compare
BWI76_RS23360 -2.0 -1.0 diaminopimelate decarboxylase compare
BWI76_RS04685 -2.0 -5.7 putative leucine operon leader peptide compare
BWI76_RS12270 -2.0 -3.6 hypothetical protein compare
BWI76_RS02530 -2.0 -1.1 tRNA dimethylallyltransferase compare
BWI76_RS04255 -2.0 -4.3 threonine synthase compare
BWI76_RS19840 -2.0 -0.5 hypothetical protein compare
BWI76_RS23885 -2.0 -0.7 2-octaprenylphenol hydroxylase compare
BWI76_RS12790 -2.0 -0.8 lactate dehydrogenase compare
BWI76_RS01110 -1.9 -3.2 TDP-fucosamine acetyltransferase compare
BWI76_RS12345 -1.9 -2.9 nitrite transporter compare
BWI76_RS27390 -1.9 -2.4 ribonuclease PH compare
BWI76_RS00180 -1.8 -0.7 F0F1 ATP synthase subunit epsilon compare
BWI76_RS09735 -1.8 -2.4 formate acetyltransferase compare
BWI76_RS24885 -1.8 -0.8 PTS galactitol transporter subunit IIB compare
BWI76_RS09615 -1.8 -1.6 ATP-dependent Clp protease ATP-binding subunit ClpA compare
BWI76_RS25320 -1.8 -6.0 glutamate synthase compare
BWI76_RS22805 -1.8 -6.6 GTP diphosphokinase compare
BWI76_RS09760 -1.8 -1.8 3-phosphoshikimate 1-carboxyvinyltransferase compare
BWI76_RS24580 -1.8 -3.1 PTS-dependent dihydroxyacetone kinase operon transcriptional regulator DhaR compare
BWI76_RS21375 -1.8 -0.6 autonomous glycyl radical cofactor GrcA compare
BWI76_RS11775 -1.8 -1.4 2-deoxy-D-gluconate 3-dehydrogenase compare
BWI76_RS17860 -1.7 -1.3 YoaH family protein compare
BWI76_RS01115 -1.7 -1.4 dTDP-4-amino-4,6-dideoxygalactose transaminase compare
BWI76_RS02995 -1.7 -3.9 aspartate carbamoyltransferase compare
BWI76_RS18770 -1.7 -0.8 DNA gyrase inhibitor compare
BWI76_RS16355 -1.7 -1.6 electron transport complex subunit A compare
BWI76_RS04270 -1.7 -2.5 transaldolase compare
BWI76_RS00875 -1.7 -3.0 DNA-binding transcriptional regulator FabR compare
BWI76_RS25960 -1.7 -2.8 NUDIX hydrolase compare
BWI76_RS07115 -1.7 -3.6 hypothetical protein compare
BWI76_RS27425 -1.7 -0.9 DNA-directed RNA polymerase subunit omega compare
BWI76_RS18780 -1.7 -2.0 D-alanyl-D-alanine carboxypeptidase compare
BWI76_RS10930 -1.6 -4.3 glucan biosynthesis protein G compare
BWI76_RS12870 -1.6 -1.5 putative phytanoyl-CoA dioxygenase compare
BWI76_RS27440 -1.6 -1.1 DNA helicase RecG compare
BWI76_RS15110 -1.6 -3.6 putative excinuclease ABC subunit A compare
BWI76_RS00385 -1.6 -4.8 nitrogen assimilation regulatory protein compare
BWI76_RS11430 -1.6 -0.7 lipoprotein compare
BWI76_RS24900 -1.6 -0.8 DeoR family transcriptional regulator compare
BWI76_RS20970 -1.6 -1.2 phosphoribosylglycinamide formyltransferase compare
BWI76_RS21780 -1.6 -2.1 S-(hydroxymethyl)glutathione synthase compare
BWI76_RS15195 -1.6 -1.2 DUF4186 domain-containing protein compare
BWI76_RS21675 -1.6 -0.5 hypothetical protein compare
BWI76_RS01080 -1.6 -5.1 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase compare
BWI76_RS17805 -1.6 -0.7 membrane protein compare
BWI76_RS17530 -1.5 -2.0 hypothetical protein compare
BWI76_RS05810 -1.5 -0.9 hypothetical protein compare
BWI76_RS02775 -1.5 -2.0 outer membrane protein assembly factor compare
BWI76_RS01135 -1.5 -3.7 lipopolysaccharide N-acetylmannosaminouronosyltransferase compare
BWI76_RS10935 -1.5 -3.2 glucan biosynthesis glucosyltransferase H compare
BWI76_RS11835 -1.5 -1.6 putative regulatory protein MarR compare
BWI76_RS18470 -1.5 -2.0 hypothetical protein compare
BWI76_RS08750 -1.5 -1.1 kinase inhibitor compare
BWI76_RS21310 -1.5 -0.9 DNA repair protein RecO compare
BWI76_RS13275 -1.5 -1.2 hypothetical protein compare
BWI76_RS05880 -1.5 -1.2 AraC-type DNA-binding domain-containing protein compare
BWI76_RS17920 -1.5 -2.3 23S rRNA (guanine(745)-N(1))-methyltransferase compare
BWI76_RS16330 -1.5 -2.1 oxidoreductase compare
BWI76_RS13820 -1.5 -1.5 hypothetical protein compare
BWI76_RS09650 -1.5 -2.5 hypothetical protein compare
BWI76_RS14620 -1.5 -1.4 acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase compare
BWI76_RS02810 -1.5 -1.3 sugar ABC transporter permease YjfF compare
BWI76_RS25335 -1.5 -1.0 stringent starvation protein A compare
BWI76_RS13915 -1.5 -4.4 magnesium transport protein MgtC compare
BWI76_RS19330 -1.5 -0.6 HAD family hydrolase compare
BWI76_RS17195 -1.5 -1.5 hypothetical protein compare
BWI76_RS00390 -1.5 -5.5 two-component system sensor histidine kinase NtrB compare
BWI76_RS21660 -1.4 -1.0 antirestriction protein compare


Specific Phenotypes

None in this experiment

For Klebsiella michiganensis M5al in mixed community experiments

For mixed community Mixed culture; Burkholderia bryophila 376MFSha3.1 3:1 starting OD to Klebsiella across organisms