Experiment set14IT026 for Sinorhizobium meliloti 1021

Compare to:

D-Leucrose carbon source

200 most important genes:

  gene name fitness t score description  
SMc02766 -8.8 -6.1 tryptophan synthase subunit beta compare
SMc00236 -8.4 -5.8 Indole-3-glycerol phosphate synthase compare
SMc02123 -8.3 -3.4 required for sulfate utilization, putative electron transport protein for sulfite reductase (from data) compare
SMc00235 -8.0 -5.5 anthranilate phosphoribosyltransferase compare
SMc02899 -7.9 -9.4 prephenate dehydratase compare
SMc00640 -7.8 -5.4 phosphoserine aminotransferase compare
SMc04405 -7.7 -7.5 3-isopropylmalate dehydrogenase compare
SM_b21175 -7.6 -5.2 phosphate uptake ABC transporter permease compare
SMc01843 -7.5 -8.9 5,10-methylenetetrahydrofolate reductase compare
SMc04045 -7.5 -5.2 dihydroxy-acid dehydratase compare
SMc01726 -7.4 -5.1 acetylglutamate kinase compare
SMc02569 -7.4 -5.1 imidazole glycerol phosphate synthase subunit HisF compare
SMc00917 -7.4 -5.1 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) compare
SMc02767 -7.3 -10.0 N-(5'-phosphoribosyl)anthranilate isomerase compare
SMc02245 -7.3 -5.0 dihydroorotate dehydrogenase 2 compare
SMc02717 -7.2 -7.0 2-isopropylmalate synthase compare
SMc02725 -7.1 -10.8 anthranilate synthase compare
SMc00993 -7.0 -6.9 phosphoribosylamine--glycine ligase compare
SMc04028 -6.9 -14.7 glutamate synthase compare
SMc01494 -6.8 -13.1 phosphoserine phosphatase compare
SMc01431 -6.8 -11.4 acetolactate synthase 3 catalytic subunit compare
SMc04026 -6.6 -10.1 glutamate synthase compare
SMc02570 -6.6 -8.5 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
SMc03070 -6.6 -7.8 glucose-6-phosphate 1-dehydrogenase compare
SMc03797 -6.5 -9.9 homoserine O-succinyltransferase compare
SMc03112 -6.5 -17.9 B12-dependent methionine synthase compare
SMa1635 -6.4 -2.6 hypothetical protein compare
SMc01054 -6.4 -5.6 required for sulfate utilization, putative electron source for sulfite reductase CysI (from data) compare
SMc00711 -6.3 -6.1 cyclohexadienyl dehydrogenase compare
SMc00876 -6.3 -4.3 ATP-binding MRP protein compare
SMc00494 -6.2 -2.5 phosphoribosylformylglycinamidine synthase subunit PurS compare
SMc03823 -6.2 -9.9 isopropylmalate isomerase large subunit compare
SMc03895 -6.1 -18.1 pyruvate carboxylase compare
SMc02217 -6.1 -7.2 O-succinylhomoserine sulfhydrylase compare
SMc00918 -6.0 -10.9 ATP phosphoribosyltransferase regulatory subunit compare
SMc00554 -6.0 -5.9 amidophosphoribosyltransferase compare
SMc02765 -5.9 -11.7 tryptophan synthase subunit alpha compare
SMc02124 -5.9 -13.8 nitrite reductase compare
SMc00293 -5.9 -12.6 homoserine dehydrogenase compare
SMc00488 -5.8 -15.4 phosphoribosylformylglycinamidine synthase II compare
SMc00092 -5.8 -14.6 phosphoadenosine phosphosulfate reductase compare
SMc02307 -5.8 -5.7 histidinol dehydrogenase compare
SMc00815 -5.7 -3.9 inosine 5'-monophosphate dehydrogenase compare
SMc01004 -5.7 -8.6 phosphoribosyl-AMP cyclohydrolase compare
SMc01801 -5.7 -3.9 N-acetylglutamylphosphate reductase (EC 1.2.1.38) (from data) compare
SMc02574 -5.7 -8.6 imidazoleglycerol-phosphate dehydratase compare
SMc00131 -5.7 -15.9 transcriptional regulator compare
SMc00615 -5.6 -7.6 phosphoribosylaminoimidazole synthetase compare
SMc00493 -5.5 -7.5 phosphoribosylformylglycinamidine synthase I compare
SMc01361 -5.5 -5.4 dihydroorotase compare
SMc00091 -5.5 -11.7 sulfate adenylyltransferase compare
SMc00614 -5.4 -8.3 phosphoribosylglycinamide formyltransferase compare
SMc00412 -5.4 -3.7 orotidine 5'-phosphate decarboxylase compare
SMc00090 -5.4 -13.1 sulfate adenylyltransferase compare
SMc02572 -5.4 -6.3 imidazole glycerol phosphate synthase subunit HisH compare
SMc02755 -5.4 -7.4 S-adenosyl-L-homocysteine hydrolase compare
SMc03776 -5.3 -3.6 gamma-glutamyl kinase compare
SMc03777 -5.3 -9.5 gamma-glutamyl phosphate reductase compare
SMc02165 -5.2 -6.2 orotate phosphoribosyltransferase compare
SM_b20329 -5.1 -12.0 required for glucoside 3-dehydrogenase activity on raffinose or trehalose (thuA) (EC 1.1.99.13) (from data) compare
SMc04088 -5.0 -8.4 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
SMc04002 -5.0 -4.9 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
SMc01360 -4.9 -4.7 aspartate carbamoyltransferase catalytic subunit compare
SMc00495 -4.8 -6.5 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
SM_b21174 -4.7 -6.5 phosphate uptake ABC transporter permease compare
SMc03763 -4.7 -4.6 cytosine-specific methyltransferase compare
SMc02707 -4.4 -6.8 hypothetical protein compare
SMc01880 -4.3 -2.9 pantoate--beta-alanine ligase compare
SMc03795 -4.2 -2.4 isopropylmalate isomerase small subunit compare
SMc02166 -4.2 -9.0 dihydroorotase compare
SMc03826 -4.1 -2.8 argininosuccinate synthase compare
SMc02137 -4.1 -4.8 ornithine carbamoyltransferase compare
SMc01053 -4.1 -5.5 siroheme synthase compare
SMc04346 -4.1 -5.1 ketol-acid reductoisomerase compare
SM_b21177 -4.1 -7.8 phosphate uptake ABC transporter ATP-binding protein compare
SMc00641 -4.0 -5.9 D-3-phosphoglycerate dehydrogenase compare
SMc02246 -4.0 -1.6 hypothetical protein compare
SMc02138 -3.9 -8.1 acetylornithine transaminase compare
SM_b20330 -3.9 -5.1 glucoside 3-dehydrogenase; active on raffinose or trehalose (thuB) (EC 1.1.99.13) (from data) conserved
SM_b20326 -3.9 -7.7 ABC transporter for D-trehalose/D-maltose/sucrose, permease component 1 (ThuF) (from data) conserved
SM_b21176 -3.9 -5.3 phosphate uptake ABC transporter substrate-binding protein precursor compare
SMc01770 -3.8 -1.6 serine hydroxymethyltransferase compare
SMc00017 -3.7 -2.0 homoserine kinase compare
SMc03978 -3.7 -2.6 transketolase compare
SMc03068 -3.7 -13.3 phosphogluconate dehydratase compare
SMc00294 -3.6 -10.0 aminotransferase compare
SMc01206 -3.6 -2.4 queuine tRNA-ribosyltransferase compare
SMc03229 -3.6 -3.2 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase compare
SM_b20325 -3.5 -11.9 ABC transporter for D-trehalose/D-maltose/sucrose, substrate-binding component (ThuE) (from data) conserved
SMc01881 -3.5 -4.1 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
SMc04001 -3.4 -1.9 phosphoribosylaminoimidazole carboxylase catalytic subunit protein compare
SMc03981 -3.2 -4.4 phosphoglycerate kinase compare
SM_b20327 -3.1 -8.2 ABC transporter for D-trehalose/D-maltose/sucrose, permease component 2 (ThuG) (from data) conserved
SMc01215 -3.1 -3.0 carbamoyl phosphate synthase large subunit compare
SMc00405 -3.0 -8.9 hypothetical protein compare
SMc01569 -2.9 -1.6 carbamoyl phosphate synthase small subunit compare
SMc03979 -2.7 -3.4 glyceraldehyde-3-phosphate dehydrogenase compare
SMc03069 -2.7 -4.8 6-phosphogluconolactonase compare
SM_b20328 -2.7 -9.9 ABC transporter for D-trehalose/D-maltose/sucrose, ATPase component (ThuK) (from data) conserved
SMc00619 -2.6 -2.3 hypothetical protein compare
SMc01441 -2.5 -7.0 membrane bound protease compare
SMc01842 -2.5 -2.9 methyltransferase transcription regulator protein compare
SMc02983 -2.5 -8.5 ornithine, DAP, or arginine decarboxylase compare
SMc01578 -2.4 -11.5 aspartate aminotransferase compare
SMc02164 -2.2 -3.4 fructokinase compare
SMc01440 -2.2 -6.2 hydrolase serine protease transmembrane protein compare
SMc01124 -2.2 -5.7 PII uridylyl-transferase compare
SMc02425 -2.1 -5.8 transcriptional regulator compare
SMa0789 -2.1 -5.8 GntR family transcriptional regulator compare
SMc02858 -2.1 -1.1 chaperone protein DnaJ compare
SMc00450 -2.0 -3.2 protoheme IX farnesyltransferase compare
SMc00302 -2.0 -4.5 hypothetical protein compare
SMc03100 -2.0 -1.2 hypothetical protein compare
SMc02145 -1.9 -1.7 signal peptide protein compare
SMc02055 -1.8 -1.8 phytoene synthase compare
SMc01147 -1.8 -4.8 coproporphyrinogen III oxidase compare
SMc02147 -1.8 -6.8 phosphate regulon sensor histidine kinase transmembrane protein compare
SMc02582 -1.8 -4.8 hypothetical protein compare
SMc01850 -1.8 -3.4 hypothetical protein compare
SMa0326 -1.7 -2.7 short chain alcohol dehydrogenase-related dehydrogenase compare
SMc01430 -1.7 -3.5 acetolactate synthase 3 regulatory subunit compare
SMc02861 -1.7 -2.2 phosphate transporter compare
SMc01800 -1.7 -1.8 cytochrome C oxidase assembly transmembrane protein compare
SMc01028 -1.7 -10.6 phosphopyruvate hydratase compare
SMc00451 -1.7 -7.1 processing protease compare
SMc02373 -1.6 -2.1 hypothetical protein compare
SMc00414 -1.6 -10.8 hypothetical protein compare
SMc02058 -1.5 -3.3 YAJC protein compare
SMc02363 -1.5 -2.2 cytochrome C-type biogenesis transmembrane protein compare
SMc00963 -1.5 -2.7 hypothetical protein compare
SMc03924 -1.5 -8.3 glycogen synthase compare
SMc01852 -1.5 -7.2 pyrophosphate--fructose-6-phosphate 1-phosphotransferase compare
SMc01183 -1.5 -1.9 LexA repressor compare
SM_b20758 -1.5 -2.0 ArsR family transcriptional regulator compare
SMc01280 -1.4 -3.1 protease compare
SMc02495 -1.4 -1.9 translaldolase compare
SMc03161 -1.4 -8.0 oxidoreductase compare
SMc02835 -1.3 -6.8 glucokinase compare
SMc00012 -1.3 -2.1 cytochrome C oxidase assembly protein compare
SMc02141 -1.3 -2.8 phosphate transporter PhoU compare
SMc01187 -1.3 -2.2 rare lipoprotein A compare
SMc02451 -1.3 -1.3 hypothetical protein compare
SMc02640 -1.3 -3.7 UDP-glucuronic acid epimerase compare
SMc04348 -1.3 -1.2 transcriptional regulator compare
SMc02142 -1.3 -5.4 phosphate transporter ATP-binding protein compare
SMc00914 -1.2 -4.2 oxidoreductase compare
SMc01568 -1.2 -1.8 hypothetical protein compare
SMc03153 -1.2 -2.5 keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase compare
SMc03967 -1.2 -1.7 Holliday junction resolvase compare
SMc02724 -1.2 -3.6 hypothetical protein compare
SMc02683 -1.2 -1.3 hypothetical protein compare
SMc04213 -1.1 -1.9 diacylglycerol kinase compare
SMc02833 -1.1 -1.7 penicillin-insensitive murein endopeptidase compare
SMc01144 -1.1 -3.5 ribonuclease PH compare
SMc00147 -1.1 -2.8 hypothetical protein compare
SMc00588 -1.1 -1.4 L-arabinose 1-dehydrogenase; D-galactose 1-dehydrogenase (EC 1.1.1.46; EC 1.1.1.48) (from data) compare
SMa1095 -1.1 -1.1 hypothetical protein compare
SMc03849 -1.1 -0.9 heme exporter C (cytochrome C-type biogenesis protein) transmembrane compare
SMc02362 -1.0 -2.0 cytochrome c-type biogenesis protein CcmE compare
SMc02812 -1.0 -3.2 hypothetical protein compare
SMc02985 -1.0 -5.3 hypothetical protein compare
SMc04454 -1.0 -5.1 ABC transporter ATP-binding protein compare
SMc01368 -1.0 -4.1 transport transmembrane protein compare
SMc02144 -1.0 -2.7 phosphate ABC transporter permease compare
SMc00982 -1.0 -3.6 dioxygenase compare
SMa1924 -1.0 -0.8 hypothetical protein compare
SMc02897 -1.0 -2.4 cytochrome C transmembrane protein compare
SMc04005 -1.0 -4.4 pyruvate kinase compare
SMc03993 -1.0 -2.3 hypothetical protein compare
SMc00854 -0.9 -1.8 hypothetical protein compare
SMc04389 -0.9 -1.9 hydroxypyruvate reductase compare
SMc03842 -0.9 -2.9 hypothetical protein compare
SM_b21173 -0.9 -1.5 hypothetical protein compare
SM_b20862 -0.9 -2.1 hypothetical protein compare
SMc01364 -0.9 -1.1 DNA topoisomerase I compare
SMc04319 -0.9 -2.0 hypothetical protein compare
SM_b20746 -0.9 -1.0 hypothetical protein compare
SMc01342 -0.9 -3.2 hypothetical protein compare
SMc03980 -0.9 -2.8 hypothetical protein compare
SMc04296 -0.9 -0.9 cell division protein FtsZ compare
SM_b20948 -0.9 -1.6 glucosyltransferase compare
SMc00981 -0.9 -5.0 ferredoxin protein compare
SMc02544 -0.9 -1.0 hypothetical protein compare
SM_b20570 -0.9 -4.7 aliphatic sulfonate ABC transporter substrate-binding protein compare
SM_b20011 -0.9 -3.0 hypothetical protein compare
SMc02980 -0.8 -1.4 hypothetical protein compare
SMc01043 -0.8 -4.5 nitrogen assimilation regulatory protein compare
SM_b21689 -0.8 -2.6 hypothetical protein compare
SM_b20994 -0.8 -2.0 hypothetical protein compare
SMc03006 -0.8 -1.1 chemotaxis regulator protein compare
SMc02107 -0.8 -1.0 hypothetical protein compare
SMc00511 -0.8 -3.0 D-ribulose-5-phosphate 3-epimerase compare
SMc01041 -0.8 -2.3 NIFR3-like protein compare
SMc02102 -0.8 -2.4 hypothetical protein compare
SMc03242 -0.8 -2.1 GTP-binding protein compare
SMc02697 -0.8 -1.1 hypothetical protein compare
SMc01208 -0.8 -2.0 peptidyl-prolyl cis-trans isomerase B protein compare
SMc03135 -0.8 -1.8 amino-acid transport system ATP-binding ABC transporter protein compare
SMc02838 -0.8 -4.1 phosphoglyceromutase compare
SMc01097 -0.8 -2.0 hypothetical protein compare


Specific Phenotypes

For 5 genes in this experiment

For carbon source D-Leucrose in Sinorhizobium meliloti 1021

For carbon source D-Leucrose across organisms