Experiment set14IT025 for Klebsiella michiganensis M5al

Compare to:

RCH2_defined_noCarbon with Mixed culture; Ralstonia sp. UNC404CL21Col 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x

200 most important genes:

  gene name fitness t score description  
BWI76_RS07065 -8.2 -4.5 5-(carboxyamino)imidazole ribonucleotide synthase compare
BWI76_RS20965 -7.6 -2.8 phosphoribosylformylglycinamidine cyclo-ligase compare
BWI76_RS04250 -7.6 -4.8 homoserine kinase compare
BWI76_RS20355 -6.7 -2.5 colicin V production protein compare
BWI76_RS04465 -6.3 -3.2 carbamoyl-phosphate synthase small subunit compare
BWI76_RS00855 -6.0 -8.2 argininosuccinate lyase compare
BWI76_RS04670 -5.7 -9.3 3-isopropylmalate dehydratase large subunit compare
BWI76_RS18920 -5.6 -2.4 ATP phosphoribosyltransferase compare
BWI76_RS04470 -5.5 -8.4 carbamoyl phosphate synthase large subunit compare
BWI76_RS18925 -5.5 -5.6 histidinol dehydrogenase compare
BWI76_RS17975 -5.4 -2.7 tail-specific protease compare
BWI76_RS10950 -5.2 -1.9 MFS transporter compare
BWI76_RS20350 -5.1 -4.2 amidophosphoribosyltransferase compare
BWI76_RS18950 -5.0 -3.8 imidazole glycerol phosphate synthase cyclase subunit compare
BWI76_RS16965 -4.9 -1.5 murein lipoprotein compare
BWI76_RS25070 -4.9 -1.0 hypothetical protein compare
BWI76_RS11190 -4.8 -1.5 putative TetR/AcrR family transcriptional regulatory protein compare
BWI76_RS20785 -4.7 -1.0 ethanolamine utilization protein EutJ compare
BWI76_RS26460 -4.7 -2.6 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
BWI76_RS26455 -4.6 -1.4 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase compare
BWI76_RS00845 -4.6 -8.6 N-acetyl-gamma-glutamyl-phosphate reductase compare
BWI76_RS22755 -4.6 -2.9 phosphoadenosine phosphosulfate reductase compare
BWI76_RS15260 -4.5 -1.0 hypothetical protein compare
BWI76_RS18605 -4.5 -1.6 oxidoreductase molybdopterin-binding protein compare
BWI76_RS21265 -4.5 -9.0 phosphoribosylformylglycinamidine synthase compare
BWI76_RS21460 -4.4 -0.9 translation inhibitor protein RaiA compare
BWI76_RS27390 -4.4 -3.5 ribonuclease PH compare
BWI76_RS02995 -4.4 -5.2 aspartate carbamoyltransferase compare
BWI76_RS04245 -4.3 -10.2 bifunctional aspartate kinase/homoserine dehydrogenase I compare
BWI76_RS23265 -4.3 -1.3 hypothetical protein compare
BWI76_RS00785 -4.3 -6.2 cystathionine gamma-synthase compare
BWI76_RS20150 -4.2 -1.5 NADH:ubiquinone oxidoreductase subunit J compare
BWI76_RS08605 -4.2 -1.5 phosphoglyceromutase compare
BWI76_RS08520 -4.2 -1.5 colicin transporter TolQ compare
BWI76_RS00990 -4.2 -7.4 ketol-acid reductoisomerase compare
BWI76_RS18770 -4.2 -0.9 DNA gyrase inhibitor compare
BWI76_RS04305 -4.2 -0.9 molecular chaperone DnaJ compare
BWI76_RS25115 -4.1 -5.6 argininosuccinate synthase compare
BWI76_RS24285 -4.1 -4.9 cystathionine beta-lyase compare
BWI76_RS01630 -4.1 -0.9 16S ribosomal RNA compare
BWI76_RS18940 -4.1 -3.7 imidazole glycerol phosphate synthase subunit HisH compare
BWI76_RS03080 -4.1 -2.1 (Fe-S)-cluster assembly protein compare
BWI76_RS00980 -4.1 -8.4 PLP-dependent threonine dehydratase compare
BWI76_RS05840 -4.0 -2.3 glutamate 5-kinase compare
BWI76_RS22690 -4.0 -1.9 adenylyl-sulfate kinase compare
BWI76_RS09625 -4.0 -0.8 hypothetical protein compare
BWI76_RS23220 -4.0 -6.4 amino-acid N-acetyltransferase compare
BWI76_RS20895 -4.0 -4.3 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
BWI76_RS09760 -3.9 -2.0 3-phosphoshikimate 1-carboxyvinyltransferase compare
BWI76_RS05880 -3.9 -1.2 AraC-type DNA-binding domain-containing protein compare
BWI76_RS04675 -3.9 -5.0 3-isopropylmalate dehydrogenase compare
BWI76_RS11845 -3.9 -1.0 tryptophan synthase subunit beta compare
BWI76_RS16955 -3.9 -0.8 hypothetical protein compare
BWI76_RS00975 -3.9 -7.9 dihydroxy-acid dehydratase compare
BWI76_RS01110 -3.9 -4.4 TDP-fucosamine acetyltransferase compare
BWI76_RS12070 -3.8 -0.8 hypothetical protein compare
BWI76_RS04525 -3.8 -1.4 4-hydroxythreonine-4-phosphate dehydrogenase PdxA compare
BWI76_RS13755 -3.8 -1.1 hypothetical protein compare
BWI76_RS15195 -3.8 -1.1 DUF4186 domain-containing protein compare
BWI76_RS04255 -3.8 -7.8 threonine synthase compare
BWI76_RS04160 -3.7 -2.1 phosphoserine phosphatase compare
BWI76_RS04665 -3.7 -10.6 3-isopropylmalate dehydratase small subunit compare
BWI76_RS09910 -3.7 -13.7 dihydroorotate dehydrogenase (quinone) compare
BWI76_RS11965 -3.6 -2.0 orotidine-5'-phosphate decarboxylase compare
BWI76_RS05015 -3.6 -1.5 transcriptional regulator compare
BWI76_RS04240 -3.6 -0.9 thr operon leader peptide compare
BWI76_RS08530 -3.6 -1.1 protein TolA compare
BWI76_RS00835 -3.5 -8.6 phosphoenolpyruvate carboxylase compare
BWI76_RS22765 -3.5 -7.8 sulfite reductase subunit alpha compare
BWI76_RS01615 -3.5 -9.0 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase compare
BWI76_RS18955 -3.5 -3.2 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase compare
BWI76_RS25335 -3.5 -1.3 stringent starvation protein A compare
BWI76_RS19770 -3.5 -1.0 bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase compare
BWI76_RS18935 -3.5 -3.4 bifunctional imidazole glycerol-phosphate dehydratase/histidinol phosphatase compare
BWI76_RS25320 -3.4 -5.5 glutamate synthase compare
BWI76_RS25920 -3.4 -1.2 peptidylprolyl isomerase compare
BWI76_RS13560 -3.4 -0.7 amino acid ABC transporter substrate-binding subunit compare
BWI76_RS20360 -3.4 -0.7 cell division protein DedD compare
BWI76_RS03010 -3.4 -5.8 ornithine carbamoyltransferase compare
BWI76_RS04685 -3.4 -7.4 putative leucine operon leader peptide compare
BWI76_RS04715 -3.4 -1.0 division/cell wall cluster transcriptional repressor MraZ compare
BWI76_RS05835 -3.3 -1.4 gamma-glutamyl-phosphate reductase compare
BWI76_RS18930 -3.3 -2.0 histidinol-phosphate transaminase compare
BWI76_RS01885 -3.2 -1.2 CsbD family protein compare
BWI76_RS01655 -3.2 -5.8 homoserine O-succinyltransferase compare
BWI76_RS23920 -3.2 -1.5 D-3-phosphoglycerate dehydrogenase compare
BWI76_RS04645 -3.2 -2.1 3-dehydroquinase compare
BWI76_RS04705 -3.2 -3.7 DNA-binding transcriptional regulator FruR compare
BWI76_RS14305 -3.1 -4.2 metallophosphoesterase compare
BWI76_RS14320 -3.1 -1.5 hypothetical protein compare
BWI76_RS11840 -3.1 -4.4 tryptophan synthase subunit alpha compare
BWI76_RS08525 -3.1 -1.1 colicin transporter compare
BWI76_RS21465 -3.1 -2.4 bifunctional chorismate mutase/prephenate dehydratase compare
BWI76_RS00345 -3.1 -1.9 protein disulfide oxidoreductase DsbA compare
BWI76_RS27425 -3.1 -1.1 DNA-directed RNA polymerase subunit omega compare
BWI76_RS04680 -3.1 -6.9 2-isopropylmalate synthase compare
BWI76_RS24100 -3.1 -2.8 YggS family pyridoxal phosphate enzyme compare
BWI76_RS20640 -3.1 -3.7 cysteine synthase A compare
BWI76_RS07465 -3.1 -0.9 TetR family transcriptional regulator compare
BWI76_RS26395 -3.0 -4.8 cell division protein FtsE compare
BWI76_RS16895 -3.0 -0.9 3-(3-hydroxy-phenyl)propionate transporter MhpT compare
BWI76_RS20750 -3.0 -0.6 carboxysome structural protein EutK compare
BWI76_RS01095 -3.0 -1.7 UDP-N-acetyl-D-mannosamine dehydrogenase compare
BWI76_RS07070 -3.0 -3.4 5-(carboxyamino)imidazole ribonucleotide mutase compare
BWI76_RS23365 -3.0 -3.1 LysR family transcriptional regulator compare
BWI76_RS15660 -3.0 -1.5 hypothetical protein compare
BWI76_RS09755 -3.0 -1.8 phosphoserine transaminase compare
BWI76_RS16485 -3.0 -0.9 ribonuclease T compare
BWI76_RS19010 -2.9 -1.6 polysaccharide pyruvyl transferase yvff compare
BWI76_RS01935 -2.9 -1.7 thiamin phosphate synthase compare
BWI76_RS00850 -2.9 -4.0 acetylglutamate kinase compare
BWI76_RS27385 -2.9 -5.9 orotate phosphoribosyltransferase compare
BWI76_RS00965 -2.9 -0.6 acetolactate synthase 2 small subunit compare
BWI76_RS00720 -2.9 -1.2 DNA-binding response regulator compare
BWI76_RS06535 -2.9 -1.7 endopeptidase La compare
BWI76_RS00875 -2.8 -3.5 DNA-binding transcriptional regulator FabR compare
BWI76_RS14390 -2.8 -0.8 hypothetical protein compare
BWI76_RS01350 -2.8 -0.6 NAD(P)H-flavin reductase compare
BWI76_RS15825 -2.8 -0.8 hypothetical protein compare
BWI76_RS23490 -2.8 -4.4 fimbrial protein compare
BWI76_RS08210 -2.8 -0.8 N-acetylglucosamine-6-phosphate deacetylase compare
BWI76_RS05120 -2.8 -5.7 bifunctional glycosyl transferase/transpeptidase compare
BWI76_RS21810 -2.7 -0.8 universal stress protein compare
BWI76_RS08535 -2.7 -1.0 translocation protein TolB compare
BWI76_RS01800 -2.7 -1.5 glucose-6-phosphate isomerase compare
BWI76_RS07730 -2.7 -0.6 iron-enterobactin transporter membrane protein compare
BWI76_RS21580 -2.7 -1.0 SsrA-binding protein compare
BWI76_RS20380 -2.7 -0.6 tRNA pseudouridine(38-40) synthase TruA compare
BWI76_RS24605 -2.6 -4.4 dihydroxyacetone kinase subunit DhaM compare
BWI76_RS09645 -2.6 -0.5 thioredoxin-disulfide reductase compare
BWI76_RS11850 -2.6 -6.4 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase compare
BWI76_RS22805 -2.5 -5.5 GTP diphosphokinase compare
BWI76_RS12460 -2.5 -1.7 envelope stress response membrane protein PspC compare
BWI76_RS09195 -2.5 -0.7 N-acetyltransferase compare
BWI76_RS01610 -2.5 -4.2 phosphoribosylamine--glycine ligase compare
BWI76_RS21370 -2.5 -0.7 ATP-dependent RNA helicase SrmB compare
BWI76_RS13820 -2.5 -1.1 hypothetical protein compare
BWI76_RS16195 -2.5 -1.4 hypothetical protein compare
BWI76_RS10935 -2.4 -4.1 glucan biosynthesis glucosyltransferase H compare
BWI76_RS25645 -2.4 -3.0 shikimate dehydrogenase compare
BWI76_RS11635 -2.4 -1.2 ABC transporter compare
BWI76_RS12495 -2.4 -0.8 2-Cys peroxiredoxin compare
BWI76_RS08040 -2.4 -1.5 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH compare
BWI76_RS17820 -2.4 -1.9 hypothetical protein compare
BWI76_RS01080 -2.4 -5.9 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase compare
BWI76_RS08385 -2.3 -2.3 citrate (Si)-synthase compare
BWI76_RS09970 -2.3 -0.6 porin OmpA compare
BWI76_RS11520 -2.3 -0.8 hypothetical protein compare
BWI76_RS17300 -2.3 -0.6 tRNA-Tyr compare
BWI76_RS22760 -2.3 -3.5 sulfite reductase subunit beta compare
BWI76_RS00985 -2.3 -4.9 transcriptional regulator IlvY compare
BWI76_RS26390 -2.2 -4.5 cell division protein FtsX compare
BWI76_RS00240 -2.2 -0.9 FMN-binding protein MioC compare
BWI76_RS00805 -2.2 -4.2 5,10-methylenetetrahydrofolate reductase compare
BWI76_RS18755 -2.2 -0.9 adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase compare
BWI76_RS21475 -2.2 -2.7 bifunctional chorismate mutase/prephenate dehydrogenase compare
BWI76_RS21450 -2.1 -1.3 23S rRNA pseudouridine(1911/1915/1917) synthase compare
BWI76_RS25425 -2.1 -0.6 arginine repressor compare
BWI76_RS06475 -2.1 -0.8 protoheme IX farnesyltransferase compare
BWI76_RS27820 -2.1 -0.6 ilvB operon leader peptide IvbL compare
BWI76_RS08980 -2.1 -1.0 DNA starvation/stationary phase protection protein compare
BWI76_RS12450 -2.1 -1.8 phage shock protein PspA compare
BWI76_RS20280 -2.1 -4.2 phosphodiesterase compare
BWI76_RS23360 -2.1 -0.8 diaminopimelate decarboxylase compare
BWI76_RS19840 -2.1 -0.4 hypothetical protein compare
BWI76_RS23885 -2.1 -0.6 2-octaprenylphenol hydroxylase compare
BWI76_RS24610 -2.1 -2.2 dihydroxyacetone kinase compare
BWI76_RS21660 -2.0 -1.0 antirestriction protein compare
BWI76_RS08405 -2.0 -1.8 succinate dehydrogenase flavoprotein subunit compare
BWI76_RS18550 -2.0 -1.2 tRNA-Asn compare
BWI76_RS04270 -2.0 -2.9 transaldolase compare
BWI76_RS08395 -2.0 -1.2 succinate dehydrogenase cytochrome b556 large subunit compare
BWI76_RS09730 -2.0 -0.6 pyruvate formate lyase 1-activating protein compare
BWI76_RS15690 -1.9 -2.2 hypothetical protein compare
BWI76_RS00960 -1.9 -3.4 acetolactate synthase 2 catalytic subunit compare
BWI76_RS12215 -1.9 -3.9 HNH endonuclease compare
BWI76_RS09190 -1.9 -1.3 hypothetical protein compare
BWI76_RS06635 -1.9 -1.8 methylated-DNA--protein-cysteine methyltransferase compare
BWI76_RS26470 -1.9 -2.3 4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase compare
BWI76_RS02780 -1.9 -6.8 translocation and assembly module TamB compare
BWI76_RS25315 -1.9 -5.9 glutamate synthase large subunit compare
BWI76_RS26000 -1.9 -3.7 aspartate aminotransferase family protein compare
BWI76_RS09735 -1.9 -2.8 formate acetyltransferase compare
BWI76_RS20135 -1.9 -2.2 NADH-quinone oxidoreductase subunit M compare
BWI76_RS21570 -1.9 -1.2 RnfH family protein compare
BWI76_RS11860 -1.8 -6.0 anthranilate synthase component I compare
BWI76_RS18375 -1.8 -2.8 hypothetical protein compare
BWI76_RS22625 -1.8 -0.8 transcriptional regulator compare
BWI76_RS10930 -1.8 -5.5 glucan biosynthesis protein G compare
BWI76_RS00180 -1.8 -0.5 F0F1 ATP synthase subunit epsilon compare
BWI76_RS16425 -1.8 -2.3 hypothetical protein compare
BWI76_RS25870 -1.8 -0.9 elongation factor Tu compare
BWI76_RS10060 -1.7 -1.1 acylphosphatase compare
BWI76_RS01125 -1.7 -3.5 4-alpha-L-fucosyltransferase compare
BWI76_RS15290 -1.7 -0.8 transcriptional regulator compare
BWI76_RS12270 -1.7 -2.1 hypothetical protein compare
BWI76_RS23480 -1.7 -8.9 EAL domain-containing protein compare
BWI76_RS11155 -1.7 -1.5 penicillin-binding protein activator LpoB compare
BWI76_RS03415 -1.7 -2.2 LacI family transcriptional regulator compare
BWI76_RS00710 -1.7 -1.2 6-N-hydroxylaminopurine resistance protein compare


Specific Phenotypes

For 2 genes in this experiment

For mixed community Mixed culture; Ralstonia sp. UNC404CL21Col 3:1 starting OD to Klebsiella in Klebsiella michiganensis M5al

For mixed community Mixed culture; Ralstonia sp. UNC404CL21Col 3:1 starting OD to Klebsiella across organisms