Experiment set14IT021 for Klebsiella michiganensis M5al

Compare to:

Fungal_growth_media_mCAFEs_v1 with Sodium nitrate 20 mM

200 most important genes:

  gene name fitness t score description  
BWI76_RS18930 -8.4 -4.7 histidinol-phosphate transaminase compare
BWI76_RS07065 -7.2 -7.1 5-(carboxyamino)imidazole ribonucleotide synthase compare
BWI76_RS18935 -7.0 -6.3 bifunctional imidazole glycerol-phosphate dehydratase/histidinol phosphatase compare
BWI76_RS11965 -6.8 -4.4 orotidine-5'-phosphate decarboxylase compare
BWI76_RS18950 -6.8 -4.1 imidazole glycerol phosphate synthase cyclase subunit compare
BWI76_RS20350 -6.6 -9.1 amidophosphoribosyltransferase compare
BWI76_RS04255 -6.4 -8.7 threonine synthase compare
BWI76_RS01610 -6.4 -9.8 phosphoribosylamine--glycine ligase compare
BWI76_RS00975 -6.3 -12.9 dihydroxy-acid dehydratase compare
BWI76_RS25115 -6.2 -8.5 argininosuccinate synthase compare
BWI76_RS11850 -6.2 -7.4 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase compare
BWI76_RS00855 -6.2 -8.5 argininosuccinate lyase compare
BWI76_RS21265 -6.2 -14.4 phosphoribosylformylglycinamidine synthase compare
BWI76_RS18925 -6.1 -6.7 histidinol dehydrogenase compare
BWI76_RS27385 -6.0 -4.1 orotate phosphoribosyltransferase compare
BWI76_RS26425 -5.9 -7.1 zinc/cadmium/mercury/lead-transporting ATPase compare
BWI76_RS01615 -5.9 -7.1 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase compare
BWI76_RS04245 -5.9 -11.3 bifunctional aspartate kinase/homoserine dehydrogenase I compare
BWI76_RS00835 -5.9 -13.7 phosphoenolpyruvate carboxylase compare
BWI76_RS00850 -5.9 -6.6 acetylglutamate kinase compare
BWI76_RS20965 -5.8 -3.4 phosphoribosylformylglycinamidine cyclo-ligase compare
BWI76_RS18955 -5.8 -5.4 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase compare
BWI76_RS02995 -5.8 -6.8 aspartate carbamoyltransferase compare
BWI76_RS18940 -5.7 -6.8 imidazole glycerol phosphate synthase subunit HisH compare
BWI76_RS23365 -5.7 -3.4 LysR family transcriptional regulator compare
BWI76_RS03010 -5.7 -8.6 ornithine carbamoyltransferase compare
BWI76_RS00805 -5.6 -5.3 5,10-methylenetetrahydrofolate reductase compare
BWI76_RS11840 -5.4 -2.5 tryptophan synthase subunit alpha compare
BWI76_RS11860 -5.4 -9.1 anthranilate synthase component I compare
BWI76_RS07070 -5.4 -3.7 5-(carboxyamino)imidazole ribonucleotide mutase compare
BWI76_RS24285 -5.3 -7.0 cystathionine beta-lyase compare
BWI76_RS04470 -5.2 -6.2 carbamoyl phosphate synthase large subunit compare
BWI76_RS01655 -5.2 -11.0 homoserine O-succinyltransferase compare
BWI76_RS18920 -5.2 -3.3 ATP phosphoribosyltransferase compare
BWI76_RS04465 -5.2 -4.9 carbamoyl-phosphate synthase small subunit compare
BWI76_RS00845 -5.2 -10.5 N-acetyl-gamma-glutamyl-phosphate reductase compare
BWI76_RS27390 -5.2 -5.0 ribonuclease PH compare
BWI76_RS25700 -5.1 -7.0 heavy metal-responsive transcriptional regulator compare
BWI76_RS04250 -5.1 -7.6 homoserine kinase compare
BWI76_RS23220 -5.0 -8.4 amino-acid N-acetyltransferase compare
BWI76_RS01095 -4.9 -2.8 UDP-N-acetyl-D-mannosamine dehydrogenase compare
BWI76_RS08385 -4.8 -2.5 citrate (Si)-synthase compare
BWI76_RS17980 -4.8 -3.3 RNA chaperone ProQ compare
BWI76_RS21165 -4.7 -1.6 Fe-S cluster assembly transcriptional regulator IscR compare
BWI76_RS00785 -4.7 -5.6 cystathionine gamma-synthase compare
BWI76_RS26455 -4.7 -2.2 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase compare
BWI76_RS00990 -4.7 -7.7 ketol-acid reductoisomerase compare
BWI76_RS04675 -4.6 -9.1 3-isopropylmalate dehydrogenase compare
BWI76_RS00980 -4.5 -12.3 PLP-dependent threonine dehydratase compare
BWI76_RS22755 -4.5 -3.1 phosphoadenosine phosphosulfate reductase compare
BWI76_RS25645 -4.5 -4.3 shikimate dehydrogenase compare
BWI76_RS04665 -4.5 -21.9 3-isopropylmalate dehydratase small subunit compare
BWI76_RS08580 -4.4 -4.4 quinolinate synthetase compare
BWI76_RS04670 -4.4 -10.1 3-isopropylmalate dehydratase large subunit compare
BWI76_RS11855 -4.4 -10.2 bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase compare
BWI76_RS20390 -4.3 -4.1 erythronate-4-phosphate dehydrogenase compare
BWI76_RS26000 -4.2 -9.3 aspartate aminotransferase family protein compare
BWI76_RS20355 -4.2 -2.5 colicin V production protein compare
BWI76_RS23265 -4.2 -1.9 hypothetical protein compare
BWI76_RS22760 -4.2 -6.9 sulfite reductase subunit beta compare
BWI76_RS12090 -4.1 -2.2 HNH endonuclease compare
BWI76_RS09910 -4.1 -14.5 dihydroorotate dehydrogenase (quinone) compare
BWI76_RS26460 -4.0 -3.9 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
BWI76_RS01950 -4.0 -16.1 excinuclease ABC subunit A conserved
BWI76_RS01275 -4.0 -8.0 LysR family transcriptional regulator compare
BWI76_RS20895 -4.0 -5.4 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
BWI76_RS08520 -4.0 -2.2 colicin transporter TolQ compare
BWI76_RS05840 -3.9 -2.7 glutamate 5-kinase compare
BWI76_RS22690 -3.9 -2.6 adenylyl-sulfate kinase compare
BWI76_RS20440 -3.8 -3.7 50S ribosomal protein L3 N(5)-glutamine methyltransferase compare
BWI76_RS17975 -3.8 -5.1 tail-specific protease compare
BWI76_RS04525 -3.8 -2.1 4-hydroxythreonine-4-phosphate dehydrogenase PdxA compare
BWI76_RS09760 -3.6 -2.5 3-phosphoshikimate 1-carboxyvinyltransferase compare
BWI76_RS21475 -3.6 -2.5 bifunctional chorismate mutase/prephenate dehydrogenase compare
BWI76_RS22765 -3.6 -8.0 sulfite reductase subunit alpha compare
BWI76_RS05015 -3.6 -2.3 transcriptional regulator compare
BWI76_RS11845 -3.6 -1.2 tryptophan synthase subunit beta compare
BWI76_RS25335 -3.5 -2.0 stringent starvation protein A compare
BWI76_RS01220 -3.5 -5.2 DNA-dependent helicase II compare
BWI76_RS21070 -3.5 -1.9 outer membrane protein assembly factor BamB compare
BWI76_RS01125 -3.4 -5.6 4-alpha-L-fucosyltransferase compare
BWI76_RS04240 -3.3 -1.6 thr operon leader peptide compare
BWI76_RS08530 -3.3 -1.5 protein TolA compare
BWI76_RS11300 -3.3 -1.1 cupin compare
BWI76_RS04685 -3.3 -9.9 putative leucine operon leader peptide compare
BWI76_RS08760 -3.2 -6.8 biotin synthase compare
BWI76_RS10990 -3.2 -3.0 dihydroorotase compare
BWI76_RS23920 -3.2 -2.2 D-3-phosphoglycerate dehydrogenase compare
BWI76_RS19770 -3.2 -1.4 bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase compare
BWI76_RS08785 -3.2 -8.3 excinuclease ABC subunit B conserved
BWI76_RS26390 -3.1 -6.8 cell division protein FtsX compare
BWI76_RS20360 -3.1 -1.0 cell division protein DedD compare
BWI76_RS00965 -3.1 -1.0 acetolactate synthase 2 small subunit compare
BWI76_RS16965 -3.1 -2.3 murein lipoprotein compare
BWI76_RS00345 -3.1 -3.0 protein disulfide oxidoreductase DsbA compare
BWI76_RS04990 -3.0 -5.8 pantoate--beta-alanine ligase compare
BWI76_RS04845 -2.9 -10.7 nicotinate-nucleotide pyrophosphorylase compare
BWI76_RS01800 -2.9 -2.0 glucose-6-phosphate isomerase compare
BWI76_RS08525 -2.9 -1.5 colicin transporter compare
BWI76_RS07465 -2.9 -1.3 TetR family transcriptional regulator compare
BWI76_RS04680 -2.8 -7.5 2-isopropylmalate synthase compare
BWI76_RS20640 -2.8 -3.7 cysteine synthase A compare
BWI76_RS26620 -2.8 -0.9 Fe-S biogenesis protein NfuA compare
BWI76_RS06535 -2.8 -1.9 endopeptidase La compare
BWI76_RS20150 -2.8 -2.6 NADH:ubiquinone oxidoreductase subunit J compare
BWI76_RS26395 -2.8 -7.2 cell division protein FtsE compare
BWI76_RS00875 -2.7 -4.7 DNA-binding transcriptional regulator FabR compare
BWI76_RS18330 -2.7 -9.5 excinuclease ABC subunit C conserved
BWI76_RS01110 -2.7 -4.5 TDP-fucosamine acetyltransferase compare
BWI76_RS09755 -2.7 -1.8 phosphoserine transaminase compare
BWI76_RS04160 -2.7 -2.9 phosphoserine phosphatase compare
BWI76_RS22700 -2.7 -4.0 sulfate adenylyltransferase subunit 2 compare
BWI76_RS15660 -2.6 -1.9 hypothetical protein compare
BWI76_RS14320 -2.6 -1.8 hypothetical protein compare
BWI76_RS21465 -2.6 -4.3 bifunctional chorismate mutase/prephenate dehydratase compare
BWI76_RS21580 -2.6 -1.4 SsrA-binding protein compare
BWI76_RS08495 -2.6 -4.1 cytochrome bd-I ubiquinol oxidase subunit I compare
BWI76_RS08210 -2.5 -1.1 N-acetylglucosamine-6-phosphate deacetylase compare
BWI76_RS05260 -2.5 -1.4 chaperone compare
BWI76_RS08535 -2.5 -1.4 translocation protein TolB compare
BWI76_RS12745 -2.5 -3.4 putative prophage membrane protein compare
BWI76_RS04645 -2.5 -2.9 3-dehydroquinase compare
BWI76_RS24340 -2.5 -6.3 two-component sensor histidine kinase compare
BWI76_RS00240 -2.5 -1.6 FMN-binding protein MioC compare
BWI76_RS00985 -2.5 -6.2 transcriptional regulator IlvY compare
BWI76_RS21450 -2.4 -1.9 23S rRNA pseudouridine(1911/1915/1917) synthase compare
BWI76_RS09640 -2.4 -1.6 cysteine/glutathione ABC transporter permease/ATP-binding protein CydD compare
BWI76_RS26055 -2.4 -8.4 siroheme synthase compare
BWI76_RS15825 -2.4 -1.0 hypothetical protein compare
BWI76_RS22695 -2.4 -5.6 sulfate adenylyltransferase compare
BWI76_RS16910 -2.4 -3.0 2-keto-4-pentenoate hydratase compare
BWI76_RS08500 -2.4 -2.5 cytochrome d ubiquinol oxidase subunit 2 compare
BWI76_RS04985 -2.3 -5.8 aspartate 1-decarboxylase compare
BWI76_RS21360 -2.3 -8.1 L-aspartate oxidase compare
BWI76_RS04995 -2.3 -6.9 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
BWI76_RS18165 -2.2 -1.0 NUDIX pyrophosphatase compare
BWI76_RS21075 -2.2 -1.7 membrane protein compare
BWI76_RS24580 -2.2 -3.6 PTS-dependent dihydroxyacetone kinase operon transcriptional regulator DhaR compare
BWI76_RS03660 -2.2 -2.5 hypothetical protein compare
BWI76_RS25280 -2.2 -1.2 RNase adaptor protein RapZ compare
BWI76_RS19870 -2.2 -3.7 malate:quinone oxidoreductase compare
BWI76_RS16355 -2.2 -2.5 electron transport complex subunit A compare
BWI76_RS04270 -2.1 -4.4 transaldolase compare
BWI76_RS19730 -2.1 -5.0 1-phosphofructokinase compare
BWI76_RS01115 -2.1 -2.0 dTDP-4-amino-4,6-dideoxygalactose transaminase compare
BWI76_RS02530 -2.1 -1.4 tRNA dimethylallyltransferase compare
BWI76_RS23360 -2.1 -1.2 diaminopimelate decarboxylase compare
BWI76_RS00960 -2.1 -3.1 acetolactate synthase 2 catalytic subunit compare
BWI76_RS23885 -2.1 -0.9 2-octaprenylphenol hydroxylase compare
BWI76_RS10935 -2.1 -4.0 glucan biosynthesis glucosyltransferase H compare
BWI76_RS05835 -2.0 -1.7 gamma-glutamyl-phosphate reductase compare
BWI76_RS18605 -2.0 -1.8 oxidoreductase molybdopterin-binding protein compare
BWI76_RS08755 -2.0 -5.9 adenosylmethionine--8-amino-7-oxononanoate transaminase compare
BWI76_RS26410 -2.0 -1.5 membrane protein compare
BWI76_RS01135 -2.0 -5.3 lipopolysaccharide N-acetylmannosaminouronosyltransferase compare
BWI76_RS01550 -2.0 -5.6 thiamine phosphate synthase compare
BWI76_RS00180 -2.0 -0.9 F0F1 ATP synthase subunit epsilon compare
BWI76_RS20740 -2.0 -4.5 coproporphyrinogen III oxidase compare
BWI76_RS22805 -2.0 -8.3 GTP diphosphokinase compare
BWI76_RS13820 -2.0 -1.3 hypothetical protein compare
BWI76_RS15015 -2.0 -1.1 DUF2132 domain-containing protein compare
BWI76_RS24595 -1.9 -1.8 dihydroxyacetone kinase subunit DhaK compare
BWI76_RS24600 -1.9 -2.5 dihydroxyacetone kinase compare
BWI76_RS25060 -1.9 -5.0 lipoprotein NlpI compare
BWI76_RS21130 -1.9 -2.2 Fe-S assembly protein IscX compare
BWI76_RS21350 -1.9 -1.9 anti-RNA polymerase sigma factor SigE compare
BWI76_RS08775 -1.9 -5.4 dethiobiotin synthase compare
BWI76_RS00970 -1.9 -2.6 branched chain amino acid aminotransferase compare
BWI76_RS13160 -1.8 -1.4 azoreductase compare
BWI76_RS19840 -1.8 -0.6 hypothetical protein compare
BWI76_RS24275 -1.8 -2.8 biopolymer transport protein ExbD compare
BWI76_RS25065 -1.8 -2.3 polyribonucleotide nucleotidyltransferase compare
BWI76_RS09655 -1.8 -2.5 leucine-responsive regulatory protein compare
BWI76_RS13755 -1.8 -1.6 hypothetical protein compare
BWI76_RS00140 -1.8 -1.3 phosphate transport system regulator PhoU compare
BWI76_RS25920 -1.8 -1.4 peptidylprolyl isomerase compare
BWI76_RS24605 -1.8 -4.6 dihydroxyacetone kinase subunit DhaM compare
BWI76_RS16490 -1.7 -1.2 glutaredoxin compare
BWI76_RS26730 -1.7 -5.4 inner membrane protein YhjD compare
BWI76_RS21480 -1.7 -4.9 phospho-2-dehydro-3-deoxyheptonate aldolase compare
BWI76_RS21375 -1.7 -0.7 autonomous glycyl radical cofactor GrcA compare
BWI76_RS23985 -1.7 -6.6 erythrose-4-phosphate dehydrogenase compare
BWI76_RS07785 -1.7 -1.4 transcriptional regulator compare
BWI76_RS09825 -1.7 -5.0 envelope biogenesis factor ElyC compare
BWI76_RS27440 -1.7 -1.2 DNA helicase RecG compare
BWI76_RS13920 -1.7 -5.3 magnesium-translocating P-type ATPase compare
BWI76_RS01530 -1.7 -4.0 2-iminoacetate synthase ThiH compare
BWI76_RS09190 -1.7 -1.2 hypothetical protein compare
BWI76_RS09730 -1.7 -0.7 pyruvate formate lyase 1-activating protein compare
BWI76_RS15535 -1.7 -1.4 hypothetical protein compare
BWI76_RS23805 -1.7 -4.8 ssDNA exonuclease RecJ compare
BWI76_RS02815 -1.7 -1.2 fructose-bisphosphatase class I compare
BWI76_RS01080 -1.6 -5.7 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase compare
BWI76_RS18755 -1.6 -1.0 adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase compare
BWI76_RS26470 -1.6 -3.1 4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase compare
BWI76_RS09625 -1.6 -0.9 hypothetical protein compare
BWI76_RS01350 -1.6 -0.7 NAD(P)H-flavin reductase compare
BWI76_RS19690 -1.6 -1.8 LysR family transcriptional regulator compare
BWI76_RS25425 -1.6 -1.0 arginine repressor compare
BWI76_RS02735 -1.6 -1.9 3'(2'),5'-bisphosphate nucleotidase CysQ compare


Specific Phenotypes

For 13 genes in this experiment

For stress Sodium nitrate in Klebsiella michiganensis M5al

For stress Sodium nitrate across organisms