Experiment set14IT021 for Klebsiella michiganensis M5al

Compare to:

Fungal_growth_media_mCAFEs_v1 with Sodium nitrate 20 mM

200 most detrimental genes:

  gene name fitness t score description  
BWI76_RS23895 +2.1 1.9 Xaa-Pro aminopeptidase compare
BWI76_RS03045 +1.7 3.3 hypothetical protein compare
BWI76_RS07725 +1.7 2.2 iron-enterobactin transporter permease compare
BWI76_RS13445 +1.5 1.9 alpha/beta hydrolase compare
BWI76_RS11515 +1.4 2.7 peptide-methionine (R)-S-oxide reductase compare
BWI76_RS16360 +1.4 1.6 electron transport complex subunit RsxB compare
BWI76_RS00325 +1.4 1.4 molybdopterin-guanine dinucleotide biosynthesis protein MobB compare
BWI76_RS14775 +1.4 3.0 creatinine amidohydrolase compare
BWI76_RS27745 +1.3 1.5 PTS sugar transporter subunit IIB compare
BWI76_RS23030 +1.3 3.3 cobalamin biosynthesis protein CbiM compare
BWI76_RS14670 +1.3 1.8 hypothetical protein compare
BWI76_RS19480 +1.3 5.1 transcriptional regulator compare
BWI76_RS19310 +1.2 3.3 ABC transporter permease compare
BWI76_RS25545 +1.2 2.8 hypothetical protein compare
BWI76_RS20430 +1.2 4.3 penicillin-insensitive murein endopeptidase compare
BWI76_RS10530 +1.2 2.9 GntR family transcriptional regulator with compare
BWI76_RS14980 +1.2 1.1 hypothetical protein compare
BWI76_RS08120 +1.2 5.3 cobalt transporter compare
BWI76_RS14280 +1.2 2.1 hypothetical protein compare
BWI76_RS13050 +1.2 2.3 transcriptional regulator compare
BWI76_RS11815 +1.2 1.4 hypothetical protein compare
BWI76_RS23915 +1.1 1.6 5-formyltetrahydrofolate cyclo-ligase compare
BWI76_RS13380 +1.0 2.3 hypothetical protein compare
BWI76_RS20155 +1.0 1.1 NADH-quinone oxidoreductase subunit I compare
BWI76_RS14935 +1.0 1.2 NIPSNAP family containing protein compare
BWI76_RS14615 +1.0 1.6 hypothetical protein compare
BWI76_RS01835 +1.0 3.9 chemotaxis protein CheW compare
BWI76_RS24810 +1.0 3.5 hypothetical protein compare
BWI76_RS13215 +1.0 1.5 type I glyceraldehyde-3-phosphate dehydrogenase compare
BWI76_RS17805 +1.0 0.9 membrane protein compare
BWI76_RS15950 +0.9 1.5 dethiobiotin synthase compare
BWI76_RS25375 +0.9 3.0 hypothetical protein compare
BWI76_RS16080 +0.9 2.1 LysR family transcriptional regulator compare
BWI76_RS12825 +0.9 2.2 hypothetical protein compare
BWI76_RS10755 +0.9 1.4 pyrimidine utilization flavin reductase protein F compare
BWI76_RS15285 +0.9 2.6 stress protection protein MarC compare
BWI76_RS12550 +0.9 1.4 hypothetical protein compare
BWI76_RS12910 +0.9 2.1 3,4-dihydroxyphenylacetate 2,3-dioxygenase compare
BWI76_RS19495 +0.9 0.9 ABC transporter, quaternary amine uptake transporter (QAT) family, ATP-binding protein compare
BWI76_RS11435 +0.9 1.3 hypothetical protein compare
BWI76_RS13325 +0.9 3.2 dicarboxylate transporter/tellurite-resistance protein TehA compare
BWI76_RS20145 +0.9 1.3 NADH-quinone oxidoreductase subunit K compare
BWI76_RS17190 +0.9 1.2 TonB system transport protein TonB compare
BWI76_RS03595 +0.9 1.5 ethanolamine utilization protein EutM compare
BWI76_RS07475 +0.9 1.5 DNA-binding transcriptional regulator RamA compare
BWI76_RS20795 +0.9 1.2 ethanolamine catabolic microcompartment shell protein EutN compare
BWI76_RS08380 +0.9 0.7 endonuclease VIII compare
BWI76_RS17945 +0.9 1.2 hypothetical protein compare
BWI76_RS14550 +0.9 3.8 2,3-dihydroxybenzoate-AMP ligase compare
BWI76_RS18735 +0.8 3.1 tautomerase family protein compare
BWI76_RS15035 +0.8 1.2 metal ABC transporter permease compare
BWI76_RS11250 +0.8 1.6 spermidine/putrescine ABC transporter permease PotB compare
BWI76_RS14930 +0.8 1.7 hypothetical protein compare
BWI76_RS22470 +0.8 2.6 transporter permease compare
BWI76_RS00025 +0.8 1.0 hypothetical protein compare
BWI76_RS13205 +0.8 2.0 hypothetical protein compare
BWI76_RS23340 +0.8 1.8 transcriptional regulator compare
BWI76_RS16210 +0.8 1.2 hypothetical protein compare
BWI76_RS20800 +0.8 1.7 carboxysome shell protein compare
BWI76_RS07735 +0.8 4.7 MFS transporter compare
BWI76_RS04805 +0.8 2.4 8-oxo-dGTP diphosphatase compare
BWI76_RS12575 +0.8 1.9 FAD-dependent oxidoreductase compare
BWI76_RS16290 +0.8 2.8 Mal regulon transcriptional regulator MalI compare
BWI76_RS20900 +0.8 0.9 outer membrane protein assembly factor BamC compare
BWI76_RS11790 +0.8 1.8 acyl-CoA thioesterase compare
BWI76_RS20050 +0.8 1.5 hypothetical protein compare
BWI76_RS18360 +0.8 1.3 aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase family protein compare
BWI76_RS03105 +0.8 0.8 myo-inosose-2 dehydratase compare
BWI76_RS09615 +0.8 1.1 ATP-dependent Clp protease ATP-binding subunit ClpA compare
BWI76_RS25485 +0.8 1.5 septum formation protein Maf compare
BWI76_RS12665 +0.8 1.8 hypothetical protein compare
BWI76_RS22280 +0.8 2.5 formate dehydrogenase-H ferredoxin subunit compare
BWI76_RS21915 +0.8 2.9 short-chain dehydrogenase/reductase SDR compare
BWI76_RS11335 +0.8 1.2 tautomerase compare
BWI76_RS14435 +0.8 1.1 glutamine ABC transporter ATP-binding protein compare
BWI76_RS18855 +0.8 2.9 cysteine desulfurase NifS compare
BWI76_RS14965 +0.8 3.8 AraC family transcriptional regulator compare
BWI76_RS12780 +0.8 1.4 hypothetical protein compare
BWI76_RS01195 +0.8 1.1 membrane protein compare
BWI76_RS08515 +0.8 1.5 acyl-CoA thioesterase YbgC compare
BWI76_RS13220 +0.8 2.6 N-acetyltransferase compare
BWI76_RS16675 +0.8 1.7 ABC transporter compare
BWI76_RS19540 +0.8 3.9 multidrug transporter permease compare
BWI76_RS13480 +0.8 0.7 XRE family transcriptional regulator compare
BWI76_RS14805 +0.7 1.6 hypothetical protein compare
BWI76_RS19330 +0.7 0.6 HAD family hydrolase compare
BWI76_RS14390 +0.7 0.9 hypothetical protein compare
BWI76_RS22620 +0.7 2.4 3-octaprenyl-4-hydroxybenzoate carboxy-lyase compare
BWI76_RS08980 +0.7 1.0 DNA starvation/stationary phase protection protein compare
BWI76_RS04200 +0.7 2.8 phosphoglycerate mutase GpmB compare
BWI76_RS11150 +0.7 0.9 membrane protein compare
BWI76_RS10835 +0.7 0.8 hypothetical protein compare
BWI76_RS02255 +0.7 2.2 chaperone-modulator protein CbpM compare
BWI76_RS17230 +0.7 1.5 peptide ABC transporter permease compare
BWI76_RS24180 +0.7 1.4 hypothetical protein compare
BWI76_RS26115 +0.7 2.9 hypothetical protein compare
BWI76_RS16195 +0.7 0.8 hypothetical protein compare
BWI76_RS12520 +0.7 2.5 hypothetical protein compare
BWI76_RS05010 +0.7 1.5 tRNA glutamyl-Q synthetase compare
BWI76_RS09520 +0.7 1.0 arginine ABC transporter ATP-binding protein ArtP compare
BWI76_RS11710 +0.7 1.9 nucleotide excision repair endonuclease compare
BWI76_RS19890 +0.7 3.0 alpha-ketoglutarate-dependent dioxygenase AlkB compare
BWI76_RS16025 +0.7 0.6 triphosphoribosyl-dephospho-CoA synthase compare
BWI76_RS06175 +0.7 2.5 DUF188 domain-containing protein compare
BWI76_RS23215 +0.7 3.5 N-acetylmuramoyl-L-alanine amidase compare
BWI76_RS03310 +0.7 2.3 AraC family transcriptional regulator compare
BWI76_RS02655 +0.7 1.9 hypothetical protein compare
BWI76_RS26645 +0.7 3.5 ferrous iron transporter B compare
BWI76_RS02800 +0.7 2.0 ABC transporter compare
BWI76_RS02050 +0.7 1.0 CidA/LrgA family protein compare
BWI76_RS18130 +0.7 1.4 zinc ABC transporter substrate-binding protein compare
BWI76_RS12580 +0.7 2.3 oxidoreductase compare
BWI76_RS10975 +0.7 2.2 N-methyltryptophan oxidase compare
BWI76_RS01225 +0.7 2.6 magnesium transporter CorA compare
BWI76_RS26650 +0.6 2.7 iron transporter compare
BWI76_RS12985 +0.6 1.0 transcriptional regulator compare
BWI76_RS24280 +0.6 1.8 biopolymer transporter ExbB compare
BWI76_RS19240 +0.6 1.1 ABC transporter substrate-binding protein compare
BWI76_RS23705 +0.6 1.5 2-deoxy-D-ribonyl-CoA 3-dehydrogenase (from data) compare
BWI76_RS20295 +0.6 2.4 dihydroneopterin triphosphate 2'-epimerase compare
BWI76_RS10320 +0.6 1.8 alpha-glucosidase/alpha-galactosidase compare
BWI76_RS07790 +0.6 1.3 plasmid stabilization protein compare
BWI76_RS01325 +0.6 1.3 twin-arginine translocase subunit TatB compare
BWI76_RS13730 +0.6 1.4 hypothetical protein compare
BWI76_RS01665 +0.6 2.6 Isocitrate lyase (EC 4.1.3.1) (from data) compare
BWI76_RS12790 +0.6 0.6 lactate dehydrogenase compare
BWI76_RS12500 +0.6 1.8 dipeptide epimerase compare
BWI76_RS07265 +0.6 1.8 ABC transporter ATP-binding protein compare
BWI76_RS03515 +0.6 1.7 hypothetical protein compare
BWI76_RS12480 +0.6 1.9 TIGR01620 family protein compare
BWI76_RS15925 +0.6 2.1 dimethyl sulfoxide reductase subunit A compare
BWI76_RS01355 +0.6 2.6 hypothetical protein compare
BWI76_RS18080 +0.6 2.0 protein YebE compare
BWI76_RS20775 +0.6 2.8 ethanolamine utilization protein EutH compare
BWI76_RS02275 +0.6 2.9 TetR family transcriptional regulator compare
BWI76_RS23195 +0.6 1.5 ethanolamine utilization protein EutP compare
BWI76_RS20730 +0.6 1.0 hypothetical protein compare
BWI76_RS01585 +0.6 2.4 transcriptional regulator compare
BWI76_RS19530 +0.6 1.5 YIP1 family protein compare
BWI76_RS01930 +0.6 2.3 acid phosphatase/phosphotransferase compare
BWI76_RS19880 +0.6 3.0 magnesium transporter compare
BWI76_RS13175 +0.6 1.4 NodT family RND efflux system outer membrane lipoprotein compare
BWI76_RS01935 +0.6 1.0 thiamin phosphate synthase compare
BWI76_RS27045 +0.6 3.9 XylR family transcriptional regulator compare
BWI76_RS17400 +0.6 0.7 transporter compare
BWI76_RS08720 +0.6 1.1 imidazolonepropionase compare
BWI76_RS05800 +0.6 1.4 phage transcriptional activator, Ogr/delta compare
BWI76_RS25245 +0.6 0.6 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase compare
BWI76_RS23165 +0.6 2.6 ATP:cob(I)alamin adenosyltransferase compare
BWI76_RS15890 +0.6 1.8 Zn-dependent oxidoreductase compare
BWI76_RS08855 +0.6 1.2 endonuclease/exonuclease/phosphatase compare
BWI76_RS16685 +0.6 1.8 peptide ABC transporter permease compare
BWI76_RS14800 +0.6 1.2 non-heme chloroperoxidase compare
BWI76_RS01620 +0.6 1.5 hypothetical protein compare
BWI76_RS26805 +0.6 1.0 cellulose biosynthesis protein BcsF compare
BWI76_RS01000 +0.6 1.9 peptidyl-prolyl cis-trans isomerase compare
BWI76_RS11865 +0.6 1.1 phosphatase compare
BWI76_RS04955 +0.6 0.9 hypoxanthine phosphoribosyltransferase compare
BWI76_RS20915 +0.6 2.4 peroxiredoxin compare
BWI76_RS07955 +0.6 1.4 nucleoside diphosphate kinase regulator compare
BWI76_RS19695 +0.6 1.2 membrane protein compare
BWI76_RS16015 +0.6 1.6 pheromone autoinducer 2 transporter compare
BWI76_RS16760 +0.6 1.9 lipase compare
BWI76_RS06895 +0.6 3.6 biopolymer transporter ExbB compare
BWI76_RS23185 +0.6 2.0 propanediol utilization: polyhedral bodies pduT compare
BWI76_RS20605 +0.6 2.4 purine-nucleoside phosphorylase compare
BWI76_RS11915 +0.6 2.0 protease SohB compare
BWI76_RS21095 +0.6 2.0 bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN compare
BWI76_RS15790 +0.6 2.1 replication protein compare
BWI76_RS03760 +0.6 3.2 hypothetical protein compare
BWI76_RS13745 +0.6 1.4 formate dehydrogenase subunit beta compare
BWI76_RS00060 +0.6 1.5 N-acetylneuraminate lyase compare
BWI76_RS17680 +0.6 2.7 hypothetical protein compare
BWI76_RS12545 +0.6 1.2 hypothetical protein compare
BWI76_RS12585 +0.6 2.0 transcriptional regulator compare
BWI76_RS06465 +0.6 0.8 IclR family transcriptional regulator compare
BWI76_RS07165 +0.6 1.5 hypothetical protein compare
BWI76_RS09080 +0.5 1.4 molybdopterin-synthase adenylyltransferase MoeB compare
BWI76_RS21540 +0.5 2.4 membrane protein compare
BWI76_RS15330 +0.5 1.4 urea ABC transporter permease subunit UrtC compare
BWI76_RS12470 +0.5 0.9 thiosulfate sulfurtransferase PspE compare
BWI76_RS14230 +0.5 2.5 flavin monoamine oxidase family protein compare
BWI76_RS09725 +0.5 0.7 MurR/RpiR family transcriptional regulator compare
BWI76_RS02220 +0.5 2.2 carbon-phosphorus lyase subunit PhnH compare
BWI76_RS10680 +0.5 1.6 tartrate dehydrogenase compare
BWI76_RS10495 +0.5 2.7 LysR family transcriptional regulator compare
BWI76_RS26965 +0.5 3.0 hypothetical protein compare
BWI76_RS18055 +0.5 0.8 copper resistance protein D compare
BWI76_RS16585 +0.5 2.3 trehalose synthase compare
BWI76_RS16695 +0.5 2.4 dipeptide/oligopeptide/nickel ABC transporter ATP-binding protein compare
BWI76_RS06740 +0.5 1.1 50S ribosomal protein L36 compare
BWI76_RS07740 +0.5 0.7 Fe2+-enterobactin ABC transporter substrate-binding protein compare
BWI76_RS12080 +0.5 1.8 hypothetical protein compare
BWI76_RS27605 +0.5 0.9 hypothetical protein compare
BWI76_RS22220 +0.5 2.2 PTS glucitol/sorbitol transporter subunit IIB compare
BWI76_RS10365 +0.5 1.5 class IV aminotransferase compare
BWI76_RS18035 +0.5 1.4 fimbrial chaperone compare
BWI76_RS04275 +0.5 3.3 molybdopterin adenylyltransferase compare
BWI76_RS19995 +0.5 1.8 IclR family transcriptional regulator compare
BWI76_RS08280 +0.5 1.2 acyl-CoA esterase compare


Specific Phenotypes

For 13 genes in this experiment

For stress Sodium nitrate in Klebsiella michiganensis M5al

For stress Sodium nitrate across organisms