Experiment set14IT019 for Klebsiella michiganensis M5al

Compare to:

Fungal_growth_media_mCAFEs_v1 with Thallium(I) acetate 0.05 mg/mL

Group: stress
Media: Fungal_growth_media_mCAFEs_v1 + Thallium(I) acetate (0.05 mg/mL)
Culturing: Koxy_ML2a, 24-well transparent microplate; Multitron, Aerobic, at 30 (C), shaken=700 rpm
By: Trenton on 7/18/2018
Media components: 20 g/L D-Glucose, 0.2 g/L Magnesium Sulfate Heptahydrate, 0.9 g/L Potassium phosphate dibasic, 0.2 g/L Potassium Chloride, 1 g/L Ammonium Nitrate, 0.002 g/L Iron (II) sulfate heptahydrate, 0.002 g/L Zinc sulfate heptahydrate, 0.002 g/L Manganese (II) chloride tetrahydrate, 0.002 g/L Cobalt chloride hexahydrate
Growth plate: Plate 1 D1

Specific Phenotypes

For 13 genes in this experiment

For stress Thallium(I) acetate in Klebsiella michiganensis M5al

For stress Thallium(I) acetate across organisms

SEED Subsystems

Subsystem #Specific
Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes 2
Campylobacter Iron Metabolism 1
Copper homeostasis: copper tolerance 1
Ethanolamine utilization 1
Iron acquisition in Vibrio 1
NAD and NADP cofactor biosynthesis global 1
NAD regulation 1
Phosphate metabolism 1
PnuC-like transporters 1
Pyridoxin (Vitamin B6) Biosynthesis 1
Transport of Iron 1

Metabolic Maps

Color code by fitness: see overview map or list of maps.

Maps containing gene(s) with specific phenotypes:

MetaCyc Pathways

Pathways that contain genes with specific phenotypes:

Pathway #Steps #Present #Specific
NAD salvage pathway IV (from nicotinamide riboside) 2 2 2
NAD biosynthesis from nicotinamide 2 2 1
4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis I 2 2 1
pyridoxal 5'-phosphate biosynthesis I 7 7 1
superpathway of NAD biosynthesis in eukaryotes 14 7 2
superpathway of thiamine diphosphate biosynthesis III (eukaryotes) 7 3 1
superpathway of thiamine diphosphate biosynthesis I 10 10 1
superpathway of thiamine diphosphate biosynthesis II 11 9 1
superpathway of pyridoxal 5'-phosphate biosynthesis and salvage 12 12 1