Experiment set14IT008 for Klebsiella michiganensis M5al

Compare to:

Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x and biotin 0.32 ug/ml

200 most important genes:

  gene name fitness t score description  
BWI76_RS21350 -6.3 -3.9 anti-RNA polymerase sigma factor SigE compare
BWI76_RS18940 -6.2 -3.7 imidazole glycerol phosphate synthase subunit HisH compare
BWI76_RS23365 -5.7 -2.4 LysR family transcriptional regulator compare
BWI76_RS04465 -5.7 -4.2 carbamoyl-phosphate synthase small subunit compare
BWI76_RS00975 -5.6 -13.7 dihydroxy-acid dehydratase compare
BWI76_RS04255 -5.4 -8.2 threonine synthase compare
BWI76_RS04250 -5.3 -6.6 homoserine kinase compare
BWI76_RS18935 -5.2 -6.0 bifunctional imidazole glycerol-phosphate dehydratase/histidinol phosphatase compare
BWI76_RS23220 -5.0 -8.1 amino-acid N-acetyltransferase compare
BWI76_RS00990 -4.9 -8.6 ketol-acid reductoisomerase compare
BWI76_RS04470 -4.9 -7.5 carbamoyl phosphate synthase large subunit compare
BWI76_RS18925 -4.7 -5.1 histidinol dehydrogenase compare
BWI76_RS08385 -4.7 -1.7 citrate (Si)-synthase compare
BWI76_RS26455 -4.7 -1.5 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase compare
BWI76_RS00980 -4.7 -12.5 PLP-dependent threonine dehydratase compare
BWI76_RS26460 -4.7 -2.7 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
BWI76_RS00785 -4.6 -5.5 cystathionine gamma-synthase compare
BWI76_RS04675 -4.6 -6.2 3-isopropylmalate dehydrogenase compare
BWI76_RS05260 -4.5 -1.0 chaperone compare
BWI76_RS21465 -4.5 -4.6 bifunctional chorismate mutase/prephenate dehydratase compare
BWI76_RS00850 -4.5 -10.7 acetylglutamate kinase compare
BWI76_RS26665 -4.5 -2.2 DNA-binding response regulator compare
BWI76_RS22755 -4.4 -2.9 phosphoadenosine phosphosulfate reductase compare
BWI76_RS24285 -4.4 -9.2 cystathionine beta-lyase compare
BWI76_RS18950 -4.4 -4.1 imidazole glycerol phosphate synthase cyclase subunit compare
BWI76_RS00845 -4.3 -10.0 N-acetyl-gamma-glutamyl-phosphate reductase compare
BWI76_RS23265 -4.2 -1.3 hypothetical protein compare
BWI76_RS04245 -4.2 -15.0 bifunctional aspartate kinase/homoserine dehydrogenase I compare
BWI76_RS00805 -4.2 -2.8 5,10-methylenetetrahydrofolate reductase compare
BWI76_RS14065 -4.2 -1.6 hypothetical protein compare
BWI76_RS00855 -4.2 -8.9 argininosuccinate lyase compare
BWI76_RS04665 -4.1 -19.1 3-isopropylmalate dehydratase small subunit compare
BWI76_RS18955 -4.0 -4.4 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase compare
BWI76_RS18930 -3.9 -3.7 histidinol-phosphate transaminase compare
BWI76_RS20350 -3.9 -5.7 amidophosphoribosyltransferase compare
BWI76_RS24600 -3.9 -2.0 dihydroxyacetone kinase compare
BWI76_RS08520 -3.9 -1.5 colicin transporter TolQ compare
BWI76_RS00835 -3.9 -13.0 phosphoenolpyruvate carboxylase compare
BWI76_RS22760 -3.9 -6.5 sulfite reductase subunit beta compare
BWI76_RS25115 -3.8 -9.1 argininosuccinate synthase compare
BWI76_RS05840 -3.8 -2.2 glutamate 5-kinase compare
BWI76_RS07070 -3.8 -3.6 5-(carboxyamino)imidazole ribonucleotide mutase compare
BWI76_RS22690 -3.8 -1.8 adenylyl-sulfate kinase compare
BWI76_RS04525 -3.7 -1.4 4-hydroxythreonine-4-phosphate dehydrogenase PdxA compare
BWI76_RS09760 -3.6 -1.9 3-phosphoshikimate 1-carboxyvinyltransferase compare
BWI76_RS26395 -3.6 -3.9 cell division protein FtsE compare
BWI76_RS04160 -3.6 -2.1 phosphoserine phosphatase compare
BWI76_RS21475 -3.6 -1.9 bifunctional chorismate mutase/prephenate dehydrogenase compare
BWI76_RS04240 -3.6 -1.0 thr operon leader peptide compare
BWI76_RS01095 -3.5 -1.8 UDP-N-acetyl-D-mannosamine dehydrogenase compare
BWI76_RS22765 -3.5 -8.3 sulfite reductase subunit alpha compare
BWI76_RS05015 -3.5 -1.5 transcriptional regulator compare
BWI76_RS25335 -3.5 -1.3 stringent starvation protein A compare
BWI76_RS01115 -3.4 -1.8 dTDP-4-amino-4,6-dideoxygalactose transaminase compare
BWI76_RS21070 -3.4 -1.3 outer membrane protein assembly factor BamB compare
BWI76_RS01655 -3.4 -7.4 homoserine O-succinyltransferase compare
BWI76_RS11300 -3.4 -0.7 cupin compare
BWI76_RS04670 -3.4 -8.8 3-isopropylmalate dehydratase large subunit compare
BWI76_RS08530 -3.3 -1.0 protein TolA compare
BWI76_RS03010 -3.3 -6.7 ornithine carbamoyltransferase compare
BWI76_RS02735 -3.3 -2.4 3'(2'),5'-bisphosphate nucleotidase CysQ compare
BWI76_RS01615 -3.3 -9.6 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase compare
BWI76_RS01610 -3.3 -6.4 phosphoribosylamine--glycine ligase compare
BWI76_RS18920 -3.3 -2.8 ATP phosphoribosyltransferase compare
BWI76_RS21345 -3.3 -1.7 sigma-E factor regulatory protein RseB compare
BWI76_RS19770 -3.2 -1.0 bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase compare
BWI76_RS05680 -3.2 -3.9 LacI family transcriptional regulator compare
BWI76_RS20360 -3.1 -0.7 cell division protein DedD compare
BWI76_RS05835 -3.1 -1.3 gamma-glutamyl-phosphate reductase compare
BWI76_RS17975 -3.1 -3.2 tail-specific protease compare
BWI76_RS23920 -3.1 -1.5 D-3-phosphoglycerate dehydrogenase compare
BWI76_RS25300 -3.1 -2.2 hybrid sensor histidine kinase/response regulator compare
BWI76_RS20965 -3.1 -3.4 phosphoribosylformylglycinamidine cyclo-ligase compare
BWI76_RS27425 -3.1 -1.1 DNA-directed RNA polymerase subunit omega compare
BWI76_RS00875 -3.1 -3.9 DNA-binding transcriptional regulator FabR compare
BWI76_RS26390 -3.1 -7.2 cell division protein FtsX compare
BWI76_RS25645 -3.1 -6.1 shikimate dehydrogenase compare
BWI76_RS26470 -3.0 -4.5 4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase compare
BWI76_RS25070 -3.0 -1.1 hypothetical protein compare
BWI76_RS11840 -3.0 -4.1 tryptophan synthase subunit alpha compare
BWI76_RS26000 -3.0 -7.9 aspartate aminotransferase family protein compare
BWI76_RS01135 -3.0 -4.1 lipopolysaccharide N-acetylmannosaminouronosyltransferase compare
BWI76_RS24595 -2.9 -3.3 dihydroxyacetone kinase subunit DhaK compare
BWI76_RS11205 -2.9 -3.6 transcription-repair coupling factor compare
BWI76_RS11435 -2.9 -1.5 hypothetical protein compare
BWI76_RS23480 -2.9 -17.5 EAL domain-containing protein compare
BWI76_RS17980 -2.9 -2.9 RNA chaperone ProQ compare
BWI76_RS20895 -2.9 -3.9 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
BWI76_RS11860 -2.9 -7.2 anthranilate synthase component I compare
BWI76_RS07465 -2.9 -0.9 TetR family transcriptional regulator compare
BWI76_RS21265 -2.8 -11.0 phosphoribosylformylglycinamidine synthase compare
BWI76_RS11850 -2.8 -8.8 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase compare
BWI76_RS21075 -2.8 -1.0 membrane protein compare
BWI76_RS04680 -2.8 -8.2 2-isopropylmalate synthase compare
BWI76_RS08525 -2.8 -1.0 colicin transporter compare
BWI76_RS24605 -2.8 -3.8 dihydroxyacetone kinase subunit DhaM compare
BWI76_RS26620 -2.8 -0.6 Fe-S biogenesis protein NfuA compare
BWI76_RS08605 -2.7 -1.4 phosphoglyceromutase compare
BWI76_RS00960 -2.7 -5.7 acetolactate synthase 2 catalytic subunit compare
BWI76_RS24500 -2.7 -2.3 urease subunit gamma compare
BWI76_RS01800 -2.7 -1.5 glucose-6-phosphate isomerase compare
BWI76_RS04645 -2.7 -2.6 3-dehydroquinase compare
BWI76_RS02580 -2.7 -1.7 23S rRNA (guanosine(2251)-2'-O)-methyltransferase compare
BWI76_RS09755 -2.7 -1.6 phosphoserine transaminase compare
BWI76_RS06535 -2.6 -1.6 endopeptidase La compare
BWI76_RS16895 -2.6 -0.8 3-(3-hydroxy-phenyl)propionate transporter MhpT compare
BWI76_RS14320 -2.6 -1.3 hypothetical protein compare
BWI76_RS02995 -2.6 -6.9 aspartate carbamoyltransferase compare
BWI76_RS27385 -2.6 -6.0 orotate phosphoribosyltransferase compare
BWI76_RS05880 -2.6 -1.3 AraC-type DNA-binding domain-containing protein compare
BWI76_RS01275 -2.6 -7.0 LysR family transcriptional regulator compare
BWI76_RS08210 -2.6 -0.8 N-acetylglucosamine-6-phosphate deacetylase compare
BWI76_RS04685 -2.6 -6.4 putative leucine operon leader peptide compare
BWI76_RS11855 -2.6 -8.4 bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase compare
BWI76_RS01080 -2.5 -6.8 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase compare
BWI76_RS20785 -2.5 -0.9 ethanolamine utilization protein EutJ compare
BWI76_RS21580 -2.5 -0.9 SsrA-binding protein compare
BWI76_RS13490 -2.5 -2.6 pyrimidine-specific ribonucleoside hydrolase RihA compare
BWI76_RS00755 -2.5 -2.1 ATP-dependent protease subunit HslV compare
BWI76_RS13470 -2.5 -1.3 transporter compare
BWI76_RS11965 -2.5 -3.2 orotidine-5'-phosphate decarboxylase compare
BWI76_RS11980 -2.5 -1.1 DeoR family transcriptional regulator compare
BWI76_RS25870 -2.5 -1.1 elongation factor Tu compare
BWI76_RS16425 -2.5 -2.3 hypothetical protein compare
BWI76_RS07820 -2.4 -1.4 S-methyl-5-thioribose kinase compare
BWI76_RS15825 -2.4 -0.7 hypothetical protein compare
BWI76_RS08535 -2.4 -0.9 translocation protein TolB compare
BWI76_RS10990 -2.4 -2.3 dihydroorotase compare
BWI76_RS09645 -2.4 -0.5 thioredoxin-disulfide reductase compare
BWI76_RS21370 -2.4 -0.7 ATP-dependent RNA helicase SrmB compare
BWI76_RS20355 -2.3 -2.4 colicin V production protein compare
BWI76_RS09670 -2.3 -1.8 recombination factor protein RarA compare
BWI76_RS25060 -2.3 -4.4 lipoprotein NlpI compare
BWI76_RS19705 -2.3 -3.3 kinase compare
BWI76_RS01630 -2.3 -0.8 16S ribosomal RNA compare
BWI76_RS10835 -2.3 -0.8 hypothetical protein compare
BWI76_RS20720 -2.3 -1.1 hypothetical protein compare
BWI76_RS15360 -2.3 -2.3 hypothetical protein compare
BWI76_RS04270 -2.2 -3.2 transaldolase compare
BWI76_RS04815 -2.2 -1.9 cell division protein ZapD compare
BWI76_RS27310 -2.2 -10.0 glycosyltransferase compare
BWI76_RS24740 -2.2 -2.2 GntR family transcriptional regulator compare
BWI76_RS17310 -2.2 -2.9 AsnC family transcriptional regulator compare
BWI76_RS26440 -2.1 -0.9 hypothetical protein compare
BWI76_RS24580 -2.1 -2.2 PTS-dependent dihydroxyacetone kinase operon transcriptional regulator DhaR compare
BWI76_RS09910 -2.1 -10.0 dihydroorotate dehydrogenase (quinone) compare
BWI76_RS09335 -2.1 -0.8 baseplate assembly protein W compare
BWI76_RS07785 -2.1 -1.0 transcriptional regulator compare
BWI76_RS00345 -2.1 -2.9 protein disulfide oxidoreductase DsbA compare
BWI76_RS26670 -2.1 -5.4 two-component sensor histidine kinase compare
BWI76_RS09970 -2.1 -0.6 porin OmpA compare
BWI76_RS03660 -2.1 -2.3 hypothetical protein compare
BWI76_RS07065 -2.1 -4.5 5-(carboxyamino)imidazole ribonucleotide synthase compare
BWI76_RS12215 -2.1 -4.9 HNH endonuclease compare
BWI76_RS09735 -2.1 -3.5 formate acetyltransferase compare
BWI76_RS26730 -2.1 -5.7 inner membrane protein YhjD compare
BWI76_RS16260 -2.1 -1.1 two-component sensor histidine kinase compare
BWI76_RS24275 -2.1 -1.3 biopolymer transport protein ExbD compare
BWI76_RS24075 -2.0 -2.3 glutathione synthase compare
BWI76_RS13755 -2.0 -1.2 hypothetical protein compare
BWI76_RS11845 -2.0 -1.7 tryptophan synthase subunit beta compare
BWI76_RS02780 -2.0 -9.9 translocation and assembly module TamB compare
BWI76_RS07510 -2.0 -1.5 hypothetical protein compare
BWI76_RS21450 -2.0 -1.4 23S rRNA pseudouridine(1911/1915/1917) synthase compare
BWI76_RS14770 -2.0 -0.7 PTS IIA 2 domain protein compare
BWI76_RS23360 -2.0 -0.8 diaminopimelate decarboxylase compare
BWI76_RS00180 -1.9 -0.6 F0F1 ATP synthase subunit epsilon compare
BWI76_RS16965 -1.9 -1.3 murein lipoprotein compare
BWI76_RS02530 -1.9 -0.9 tRNA dimethylallyltransferase compare
BWI76_RS02775 -1.9 -3.0 outer membrane protein assembly factor compare
BWI76_RS06525 -1.9 -2.8 ATP-dependent Clp protease proteolytic subunit compare
BWI76_RS18870 -1.9 -1.4 protein NifZ compare
BWI76_RS25480 -1.9 -4.4 ribonuclease E/G compare
BWI76_RS20565 -1.9 -1.3 hypothetical protein compare
BWI76_RS27305 -1.9 -6.4 glycosyl transferase compare
BWI76_RS10305 -1.9 -4.9 transposase compare
BWI76_RS17190 -1.9 -0.9 TonB system transport protein TonB compare
BWI76_RS22700 -1.8 -4.0 sulfate adenylyltransferase subunit 2 compare
BWI76_RS20930 -1.8 -1.6 arsenate reductase (glutaredoxin) compare
BWI76_RS21310 -1.8 -0.8 DNA repair protein RecO compare
BWI76_RS18000 -1.8 -3.5 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF compare
BWI76_RS00965 -1.8 -0.5 acetolactate synthase 2 small subunit compare
BWI76_RS25960 -1.8 -2.5 NUDIX hydrolase compare
BWI76_RS11255 -1.8 -1.0 putrescine/spermidine ABC transporter ATP-binding protein compare
BWI76_RS09110 -1.8 -2.1 glutathione ABC transporter permease GsiD compare
BWI76_RS09730 -1.8 -0.5 pyruvate formate lyase 1-activating protein compare
BWI76_RS25065 -1.7 -1.7 polyribonucleotide nucleotidyltransferase compare
BWI76_RS00985 -1.7 -4.3 transcriptional regulator IlvY compare
BWI76_RS18605 -1.7 -1.2 oxidoreductase molybdopterin-binding protein compare
BWI76_RS01280 -1.7 -7.2 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase compare
BWI76_RS25000 -1.7 -1.0 malonate decarboxylase acyl carrier protein compare
BWI76_RS26095 -1.7 -0.5 shikimate kinase compare
BWI76_RS21505 -1.7 -0.9 hypothetical protein compare
BWI76_RS01775 -1.7 -0.9 hypothetical protein compare
BWI76_RS05005 -1.7 -1.5 polynucleotide adenylyltransferase compare
BWI76_RS06765 -1.7 -3.7 transcriptional regulator compare
BWI76_RS14325 -1.7 -2.0 maturase compare
BWI76_RS13560 -1.7 -0.5 amino acid ABC transporter substrate-binding subunit compare
BWI76_RS12260 -1.7 -2.4 hypothetical protein compare
BWI76_RS22955 -1.7 -2.6 transcriptional regulator GcvA compare


Specific Phenotypes

For 5 genes in this experiment

For supernatant Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted in Klebsiella michiganensis M5al

For supernatant Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted across organisms